vOTU-030575

Overview

vOTU representative UHGV-0202263

No. of genomes 2

Genome length 17,496 bps

Completeness 50.70% (medium-quality)

Host CAG-217 sp000436335

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030575
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00035 › vSUBFAM-00258 › vOTU-030575
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › CAG-217 › CAG-217 sp000436335
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202263
BioSample	NA
Genome length	17,496 bps
CheckV completeness	50.70% (medium-quality)
CheckV contamination	0.00%
CDS count	36
CDS density	91.42%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0202263_1	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0202263_1	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0202263_1	UniRef90	UniRef90_A0A6N9NXR9	Helix-turn-helix domain-containing protein	NA
UHGV-0202263_1	eggNOG-mapper	1029718.SFBM_0091	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0202263_1	PADLOC	Control_protein_00002	control protein	RM
UHGV-0202263_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0202263_1	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0202263_1	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0202263_1	Structural annotation	PF00717, PF01381, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-0202263_2	UniRef90	UniRef90_A0A374UNQ5	XRE family transcriptional regulator	NA
UHGV-0202263_2	eggNOG-mapper	445971.ANASTE_01584	Helix-turn-helix	NA
UHGV-0202263_2	Pfam	PF05339	NA	DUF739
UHGV-0202263_2	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-0202263_4	PHROG	phrog_585	NA	unknown function
UHGV-0202263_4	UniRef90	UniRef90_R6J381	PF10711 family protein	NA
UHGV-0202263_4	eggNOG-mapper	1158602.I590_03003	NA	NA
UHGV-0202263_4	Pfam	PF10711	NA	DUF2513
UHGV-0202263_5	PHROG	phrog_668	HTH DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0202263_6	PHROG	phrog_33952	NA	unknown function
UHGV-0202263_10	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0202263_10	UniRef90	UniRef90_R6J0Q7	NA	NA
UHGV-0202263_10	eggNOG-mapper	1227360.C176_12583	Siphovirus Gp157	NA
UHGV-0202263_10	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0202263_10	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0202263_11	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0202263_11	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0202263_11	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0202263_11	Structural annotation	PF04098, TIGR00607, COG5055	NA	NA
UHGV-0202263_12	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0202263_13	eggNOG-mapper	445972.ANACOL_01825	NA	NA
UHGV-0202263_14	PHROG	phrog_7566	NA	unknown function
UHGV-0202263_14	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-0202263_14	eggNOG-mapper	1007096.BAGW01000031_gene114	NA	NA
UHGV-0202263_15	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0202263_15	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0202263_15	UniRef90	UniRef90_R6JMM3	Single-stranded DNA-binding protein	NA
UHGV-0202263_15	eggNOG-mapper	718252.FP2_06770	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0202263_15	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0202263_15	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0202263_15	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0202263_15	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0202263_15	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0202263_16	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0202263_16	eggNOG-mapper	428127.EUBDOL_01512	DnaD domain protein	NA
UHGV-0202263_16	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0202263_16	Structural annotation	PF12793, NF033788, COG0640	NA	NA
UHGV-0202263_18	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0202263_18	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0202263_18	UniRef90	UniRef90_A0A0L0WED4	Holliday junction resolvase	NA
UHGV-0202263_18	eggNOG-mapper	12348.Q8SDG7_BPLLH	magnesium ion binding	NA
UHGV-0202263_18	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0202263_18	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0202263_21	KOfam	K21919	KCTD9; BTB/POZ domain-containing protein KCTD9	NA
UHGV-0202263_21	PHROG	phrog_9562	NA	unknown function
UHGV-0202263_21	UniRef90	UniRef90_A0A3D2DZZ6	Pentapeptide repeat-containing protein (Fragment)	NA
UHGV-0202263_21	eggNOG-mapper	1232443.BAIA02000078_gene49	Pentapeptide repeat protein	NA
UHGV-0202263_21	Pfam	PF00805	Pentapeptide repeats (8 copies)	Pentapeptide
UHGV-0202263_21	Pfam	PF19062	NA	DUF5758
UHGV-0202263_21	COG	COG1357	NA	NA
UHGV-0202263_21	Structural annotation	PF19062, PF13599, NF011744, COG1357	NA	NA
UHGV-0202263_23	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0202263_23	UniRef90	UniRef90_A0A355KVL2	DNA cytosine methyltransferase	NA
UHGV-0202263_23	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0202263_23	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0202263_23	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0202263_28	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0202263_28	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0202263_28	UniRef90	UniRef90_R6ILQ3	Deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-0202263_28	eggNOG-mapper	1282887.AUJG01000016_gene1113	NA	NA
UHGV-0202263_28	Pfam	PF00692	dUTPase	dUTPase
UHGV-0202263_28	NCBIFam	TIGR00576.1	dUTP diphosphatase	NA
UHGV-0202263_28	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0202263_28	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0202263_29	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0202263_29	UniRef90	UniRef90_A0A3D3FGT2	Sigma70_r4 domain-containing protein	NA
UHGV-0202263_29	eggNOG-mapper	903814.ELI_1292	NA	NA
UHGV-0202263_29	Structural annotation	PF04545, MF_00674, NF009180, COG1342	NA	NA
UHGV-0202263_31	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0202263_31	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0202263_31	UniRef90	UniRef90_R6JPZ5	Phage Terminase Small Subunit	NA
UHGV-0202263_31	eggNOG-mapper	445335.CBN_2993	Terminase small subunit	NA
UHGV-0202263_31	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0202263_31	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0202263_32	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0202263_32	PHROG	phrog_10250	NA	unknown function
UHGV-0202263_32	UniRef90	UniRef90_R6J366	Phage terminase large subunit PBSX family	NA
UHGV-0202263_32	eggNOG-mapper	411490.ANACAC_00783	Phage terminase, large subunit, PBSX family	NA
UHGV-0202263_32	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0202263_32	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0202263_32	COG	COG1783	Phage terminase large subunit	NA
UHGV-0202263_32	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0202263_33	PHROG	phrog_64	portal protein	head and packaging
UHGV-0202263_33	UniRef90	UniRef90_R6ISE3	Phage portal protein SPP1 family	NA
UHGV-0202263_33	eggNOG-mapper	877414.ATWA01000001_gene907	Phage portal protein, SPP1 family	NA
UHGV-0202263_33	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0202263_33	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0202263_33	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0202263_34	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0202263_34	UniRef90	UniRef90_R6J0C1	Phage_Mu_F domain-containing protein	NA
UHGV-0202263_34	eggNOG-mapper	1294142.CINTURNW_1685	Phage Mu protein F like protein	NA
UHGV-0202263_34	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0202263_34	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0202263_34	COG	COG2369	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0202263	Yes	17,496 bps	50.12%	50.70%	0.9772
UHGV-0145950	No	10,599 bps	49.50%	27.63%	0.9682