vOTU-030687

Overview

vOTU representative UHGV-0204091

No. of genomes 2

Genome length 39,087 bps

Completeness 76.35% (medium-quality)

Host UBA11524 sp000437595

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030687
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00252 › vOTU-030687
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › CAG-74 › UBA11524 › UBA11524 sp000437595
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204091
BioSample	SAMN00036671
Genome length	39,087 bps
CheckV completeness	76.35% (medium-quality)
CheckV contamination	0.00%
CDS count	68
CDS density	92.50%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204091_3	Structural annotation	PF07238	NA	NA
UHGV-0204091_4	PHROG	phrog_4311	minor head protein	head and packaging
UHGV-0204091_4	eggNOG-mapper	1536769.P40081_01145	Prophage endopeptidase tail	NA
UHGV-0204091_4	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0204091_4	COG	COG4926	Phage-related protein	NA
UHGV-0204091_4	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0204091_5	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-0204091_6	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0204091_6	eggNOG-mapper	1235800.C819_00476	tape measure	NA
UHGV-0204091_6	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0204091_6	Structural annotation	PF20155, MF_04138, TIGR01760	NA	NA
UHGV-0204091_10	PHROG	phrog_885	major tail protein	tail
UHGV-0204091_10	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-0204091_10	eggNOG-mapper	411465.PEPMIC_00741	NA	NA
UHGV-0204091_10	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0204091_11	Structural annotation	PF11367	NA	NA
UHGV-0204091_12	PHROG	phrog_17977	NA	unknown function
UHGV-0204091_12	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-0204091_12	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0204091_12	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0204091_14	PHROG	phrog_29	major head protein	head and packaging
UHGV-0204091_14	UniRef90	UniRef90_K1TJK6	Phage protein (Fragment)	NA
UHGV-0204091_14	eggNOG-mapper	1232443.BAIA02000078_gene29	Phage major capsid protein E	NA
UHGV-0204091_14	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0204091_14	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0204091_14	Structural annotation	PF03864, PF18316, MF_04133, NF041162, COG4653	NA	NA
UHGV-0204091_15	PHROG	phrog_909	major head protein	head and packaging
UHGV-0204091_15	UniRef90	UniRef90_K1TUL5	NA	NA
UHGV-0204091_15	eggNOG-mapper	1497679.EP56_02915	NA	NA
UHGV-0204091_16	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0204091_16	UniRef90	UniRef90_R7ICU6	Fibronectin autolysin	NA
UHGV-0204091_16	Structural annotation	PF06810	NA	NA
UHGV-0204091_17	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0204091_17	UniRef90	UniRef90_UPI00065E143B	HK97 gp10 family phage protein	NA
UHGV-0204091_17	eggNOG-mapper	509191.AEDB02000075_gene2797	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0204091_17	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0204091_17	Structural annotation	TIGR01725, COG5005	NA	NA
UHGV-0204091_18	PHROG	phrog_859	portal protein	head and packaging
UHGV-0204091_18	UniRef90	UniRef90_K1T614	Minor head protein	NA
UHGV-0204091_18	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0204091_18	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0204091_19	PHROG	phrog_64	portal protein	head and packaging
UHGV-0204091_19	UniRef90	UniRef90_K1SG85	Phage portal protein, SPP1	NA
UHGV-0204091_19	eggNOG-mapper	673376.F2VHW1_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0204091_19	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0204091_19	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0204091_20	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0204091_20	UniRef90	UniRef90_D2J053	Terminase large subunit	NA
UHGV-0204091_20	eggNOG-mapper	1140001.I571_01829	NA	NA
UHGV-0204091_20	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5323	NA	NA
UHGV-0204091_23	Structural annotation	PF17941, MF_01917, NF010490, COG3886	NA	NA
UHGV-0204091_24	KOfam	K15256	cmoA; tRNA (cmo5U34)-methyltransferase [EC:2.1.1.-]	NA
UHGV-0204091_24	PHROG	phrog_4752	tRNA methyltransferase	other
UHGV-0204091_24	UniRef90	UniRef90_A0A2K4ZGV1	tRNA (Cmo5U34)-methyltransferase	NA
UHGV-0204091_24	eggNOG-mapper	1226322.HMPREF1545_03542	trans-aconitate 2-methyltransferase activity	NA
UHGV-0204091_24	Pfam	PF13649	Methyltransferase domain	Methyltransf_25
UHGV-0204091_24	COG	COG4106	Trans-aconitate methyltransferase	NA
UHGV-0204091_24	Structural annotation	PF01209, MF_01589, TIGR00740, COG2226	NA	NA
UHGV-0204091_25	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0204091_25	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0204091_25	UniRef90	UniRef90_A0A843MF59	DNA cytosine methyltransferase	NA
UHGV-0204091_25	eggNOG-mapper	439375.Oant_1510	C-5 cytosine-specific DNA methylase	NA
UHGV-0204091_25	PADLOC	MTase_II_00164	Type II methyltransferase	RM
UHGV-0204091_25	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0204091_25	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0204091_25	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0204091_25	Structural annotation	PF00145, MF_01011, TIGR00675, COG0270	NA	NA
UHGV-0204091_26	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0204091_26	PHROG	phrog_620	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0204091_26	UniRef90	UniRef90_A0A2N5KYN6	Chromosome partitioning protein ParB	NA
UHGV-0204091_26	eggNOG-mapper	1416334.X2CXX2_9CAUD	N-methyltransferase activity	NA
UHGV-0204091_26	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0204091_26	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0204091_26	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0204091_30	PHROG	phrog_25027	NA	unknown function
UHGV-0204091_30	UniRef90	UniRef90_K1SIJ4	ArdcN domain-containing protein	NA
UHGV-0204091_30	eggNOG-mapper	1399942.U3PBI8_9CAUD	NA	NA
UHGV-0204091_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0204091_32	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0204091_32	Structural annotation	PF04545, MF_00674, NF001072, COG1342	NA	NA
UHGV-0204091_34	PHROG	phrog_824	NA	unknown function
UHGV-0204091_34	UniRef90	UniRef90_A0A645CPG3	VRR-NUC domain-containing protein	NA
UHGV-0204091_34	eggNOG-mapper	768710.DesyoDRAFT_5233	VRR-NUC domain	NA
UHGV-0204091_34	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0204091_34	Structural annotation	PF08774	NA	NA
UHGV-0204091_36	Structural annotation	TIGR03655	NA	NA
UHGV-0204091_41	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0204091_41	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0204091_41	UniRef90	UniRef90_A0A3B8XWU8	SF4 helicase domain-containing protein	NA
UHGV-0204091_41	eggNOG-mapper	1307759.JOMJ01000003_gene1934	it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins	NA
UHGV-0204091_41	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0204091_41	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0204091_41	COG	COG0305	Replicative DNA helicase	NA
UHGV-0204091_41	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0204091_42	PHROG	phrog_16304	NA	unknown function
UHGV-0204091_42	Pfam	PF19808	NA	DUF6291
UHGV-0204091_42	Structural annotation	PF19808, PF07261, TIGR01446, COG3935	NA	NA
UHGV-0204091_43	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0204091_43	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0204091_43	UniRef90	UniRef90_A0A8A5CM78	Single-stranded DNA-binding protein	NA
UHGV-0204091_43	eggNOG-mapper	926550.CLDAP_14930	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0204091_43	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0204091_43	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0204091_43	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204091_43	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0204091_43	Structural annotation	PF00436, MF_00984, NF005579, COG0629	NA	NA
UHGV-0204091_44	PHROG	phrog_398	NA	unknown function
UHGV-0204091_44	UniRef90	UniRef90_K1U9S1	NA	NA
UHGV-0204091_44	eggNOG-mapper	1485543.JMME01000021_gene802	Putative HNHc nuclease	NA
UHGV-0204091_44	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0204091_44	Structural annotation	PF16784	NA	NA
UHGV-0204091_45	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204091_45	UniRef90	UniRef90_A0A3D1PJF8	Single-stranded DNA-binding protein	NA
UHGV-0204091_45	eggNOG-mapper	1304866.K413DRAFT_1196	ERF superfamily	NA
UHGV-0204091_45	Pfam	PF04404	ERF superfamily	ERF
UHGV-0204091_45	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0204091_45	Structural annotation	PF04404, TIGR00607, COG4319	NA	NA
UHGV-0204091_46	PHROG	phrog_2205	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0204091_46	UniRef90	UniRef90_A0A4R7KUW2	Gam-like protein	NA
UHGV-0204091_46	eggNOG-mapper	697281.Mahau_0550	Bacteriophage Mu Gam like protein	NA
UHGV-0204091_46	Pfam	PF07352	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
UHGV-0204091_46	Structural annotation	PF07352	NA	NA
UHGV-0204091_51	PHROG	phrog_4433	NA	unknown function
UHGV-0204091_51	UniRef90	UniRef90_A0A1V5NWB8	Collagen triple helix repeat (20 copies)	NA
UHGV-0204091_51	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-0204091_51	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0204091_53	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0204091_53	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204091_53	UniRef90	UniRef90_A0A498CMF4	XRE family transcriptional regulator	NA
UHGV-0204091_53	eggNOG-mapper	1508644.SFBmNL_00110	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204091_53	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204091_53	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0204091_53	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0204091_54	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0204091_54	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204091_54	UniRef90	UniRef90_A0A316QGI6	XRE family transcriptional regulator	NA
UHGV-0204091_54	eggNOG-mapper	864563.HMPREF9166_0595	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204091_54	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0204091_54	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204091_54	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0204091_54	Structural annotation	PF12844, NF041951, COG1476	NA	NA
UHGV-0204091_55	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0204091_55	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0204091_56	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0204091_56	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0204091_56	UniRef90	UniRef90_A0A136Q823	DNA-binding helix-turn-helix protein	NA
UHGV-0204091_56	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204091_56	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204091_56	Structural annotation	PF01381, MF_00535, TIGR03070, COG1476	NA	NA
UHGV-0204091_57	UniRef90	UniRef90_A0A6N7SB16	Helix-turn-helix domain-containing protein	NA
UHGV-0204091_57	eggNOG-mapper	558169.AGAV01000025_gene172	Helix-turn-helix XRE-family like proteins	NA
UHGV-0204091_57	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204091_57	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0204091_57	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0204091_58	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0204091_58	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0204091_58	UniRef90	UniRef90_R6WRJ0	Helix-turn-helix domain protein	NA
UHGV-0204091_58	eggNOG-mapper	1273103.NM10_01229	Transcriptional	NA
UHGV-0204091_58	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0204091_58	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0204091_58	Structural annotation	PF12844, MF_00535, NF041951, COG1476	NA	NA
UHGV-0204091_59	PHROG	phrog_5319	outer membrane protein	other
UHGV-0204091_59	eggNOG-mapper	500633.CLOHIR_00741	NA	NA
UHGV-0204091_61	KOfam	K14059	int; integrase	NA
UHGV-0204091_61	PHROG	phrog_1	integrase	integration and excision
UHGV-0204091_61	UniRef90	UniRef90_A0A1Q6PWD2	Tyr recombinase domain-containing protein	NA
UHGV-0204091_61	eggNOG-mapper	428125.CLOLEP_02743	Belongs to the 'phage' integrase family	NA
UHGV-0204091_61	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0204091_61	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0204091_61	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0204091_61	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0204091_63	PHROG	phrog_28802	NA	unknown function
UHGV-0204091_63	Structural annotation	PF12510	NA	NA
UHGV-0204091_64	PHROG	phrog_20016	NA	unknown function
UHGV-0204091_64	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0204091_64	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0204091_64	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0204091_66	PHROG	phrog_16490	NA	unknown function
UHGV-0204091_66	eggNOG-mapper	397290.C810_05212	NA	NA
UHGV-0204091_67	PHROG	phrog_22984	NA	unknown function
UHGV-0204091_68	PHROG	phrog_21718	NA	unknown function
UHGV-0204091_68	eggNOG-mapper	397290.C810_05210	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204091	Yes	39,087 bps	57.60%	76.35%	0.9752
UHGV-1807817	No	12,970 bps	55.47%	24.96%	0.9741