vOTU-030689

Overview

vOTU representative UHGV-0204196

No. of genomes 2

Genome length 26,283 bps

Completeness 75.99% (medium-quality)

Host Lactococcus lactis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030689
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vOTU-030689
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Lactococcus › Lactococcus lactis
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0204196
BioSample	NA
Genome length	26,283 bps
CheckV completeness	75.99% (medium-quality)
CheckV contamination	0.00%
CDS count	38
CDS density	96.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0204196_1	PHROG	phrog_10512	virion structural protein	head and packaging
UHGV-0204196_1	UniRef90	UniRef90_UPI001A95B8CC	BppU family phage baseplate upper protein	NA
UHGV-0204196_1	eggNOG-mapper	1231377.C426_0890	NA	NA
UHGV-0204196_1	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0204196_2	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0204196_2	UniRef90	UniRef90_A0A8I2HI54	Peptidase S74 domain-containing protein	NA
UHGV-0204196_2	eggNOG-mapper	1231377.C426_0891	Phage minor structural protein	NA
UHGV-0204196_2	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0204196_2	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0204196_2	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0204196_2	COG	COG4926	Phage-related protein	NA
UHGV-0204196_2	Structural annotation	PF14594, PF13884, TIGR01665, COG4926	NA	NA
UHGV-0204196_3	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0204196_3	UniRef90	UniRef90_A0A0V8CYX8	Phage-related protein	NA
UHGV-0204196_3	eggNOG-mapper	1231377.C426_0892	phage tail	NA
UHGV-0204196_3	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0204196_3	COG	COG4722	Phage-related protein YomH	NA
UHGV-0204196_3	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0204196_4	PHROG	phrog_24198	NA	unknown function
UHGV-0204196_4	UniRef90	UniRef90_A0A8I2HC46	Phage tail tape measure protein	NA
UHGV-0204196_4	eggNOG-mapper	374526.A5GYM8_9CAUD	NA	NA
UHGV-0204196_5	PHROG	phrog_706	NA	unknown function
UHGV-0204196_5	UniRef90	UniRef90_A0A0V8EKB6	NA	NA
UHGV-0204196_5	eggNOG-mapper	374526.A5GYM7_9CAUD	Bacteriophage Gp15 protein	NA
UHGV-0204196_5	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0204196_5	Structural annotation	PF06854	NA	NA
UHGV-0204196_6	PHROG	phrog_1061	NA	unknown function
UHGV-0204196_6	UniRef90	UniRef90_A0A0V8CZ27	NA	NA
UHGV-0204196_7	KOfam	K20846	cgkA; kappa-carrageenase [EC:3.2.1.83]	NA
UHGV-0204196_7	PHROG	phrog_820	major tail protein	tail
UHGV-0204196_7	UniRef90	UniRef90_A0A0V8CZ42	Phage major tail shaft protein	NA
UHGV-0204196_7	eggNOG-mapper	374526.A5GYM5_9CAUD	NA	NA
UHGV-0204196_7	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0204196_7	Structural annotation	PF06199, PF02368, TIGR02126, COG5437	NA	NA
UHGV-0204196_8	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0204196_8	UniRef90	UniRef90_A0A0V8CZP2	NA	NA
UHGV-0204196_8	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0204196_9	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0204196_9	UniRef90	UniRef90_A0A0V8CYW8	NA	NA
UHGV-0204196_9	eggNOG-mapper	1134413.ANNK01000120_gene2022	Minor capsid protein	NA
UHGV-0204196_9	Structural annotation	PF11114	NA	NA
UHGV-0204196_10	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0204196_10	UniRef90	UniRef90_A0A0V8EJR5	NA	NA
UHGV-0204196_10	eggNOG-mapper	374526.A5GYM2_9CAUD	Minor capsid protein	NA
UHGV-0204196_10	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0204196_10	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0204196_11	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0204196_11	UniRef90	UniRef90_A0A0V8EJU1	Protein gp8	NA
UHGV-0204196_11	eggNOG-mapper	374526.A5GYM1_9CAUD	NA	NA
UHGV-0204196_12	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0204196_12	UniRef90	UniRef90_A0A2Z3KHI4	BIG2 domain-containing protein	NA
UHGV-0204196_12	eggNOG-mapper	1231377.C426_2212	domain, Protein	NA
UHGV-0204196_12	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0204196_12	COG	COG5492	NA	NA
UHGV-0204196_12	Structural annotation	PF02368, TIGR04225	NA	NA
UHGV-0204196_13	PHROG	phrog_1623	virion structural protein	head and packaging
UHGV-0204196_13	UniRef90	UniRef90_A0A0V8EJR0	Phage capsid and scaffold	NA
UHGV-0204196_13	eggNOG-mapper	1231377.C426_2211	domain, Protein	NA
UHGV-0204196_13	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0204196_13	COG	COG5492	NA	NA
UHGV-0204196_13	Structural annotation	PF05125, MF_04119, TIGR01551, COG4653	NA	NA
UHGV-0204196_14	PHROG	phrog_3017	head maturation protease	head and packaging
UHGV-0204196_14	UniRef90	UniRef90_A5GYR6	Peptidase_S78_2 domain-containing protein	NA
UHGV-0204196_14	eggNOG-mapper	374526.A5GYL8_9CAUD	Pfam:Peptidase_S78_2	NA
UHGV-0204196_14	Pfam	PF14550	Putative phage serine protease XkdF	Peptidase_S78_2
UHGV-0204196_14	Structural annotation	PF14550	NA	NA
UHGV-0204196_15	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-0204196_15	UniRef90	UniRef90_A5GYR5	Phage_Mu_F domain-containing protein	NA
UHGV-0204196_15	eggNOG-mapper	1231377.C426_2209	Phage Mu protein F like protein	NA
UHGV-0204196_15	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0204196_15	COG	COG2369	NA	NA
UHGV-0204196_15	Structural annotation	PF06152, TIGR01641	NA	NA
UHGV-0204196_16	PHROG	phrog_12	portal protein	head and packaging
UHGV-0204196_16	UniRef90	UniRef90_A0A1B1IM25	Putative portal protein	NA
UHGV-0204196_16	eggNOG-mapper	374526.A5GYL6_9CAUD	Phage portal protein	NA
UHGV-0204196_16	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0204196_16	NCBIFam	TIGR01540.1	phage portal protein	NA
UHGV-0204196_16	Structural annotation	PF04860, MF_04120, TIGR01540, COG5518	NA	NA
UHGV-0204196_17	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0204196_17	UniRef90	UniRef90_G6FD64	Terminase_6C domain-containing protein	NA
UHGV-0204196_17	eggNOG-mapper	374526.A5GYP8_9CAUD	intein-mediated protein splicing	NA
UHGV-0204196_17	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0204196_17	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0204196_17	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0204196_17	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0204196_18	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0204196_18	UniRef90	UniRef90_Q02ZF6	Phage terminase, small subunit	NA
UHGV-0204196_18	eggNOG-mapper	374526.A5GYP7_9CAUD	endonuclease activity	NA
UHGV-0204196_18	Structural annotation	PF07141	NA	NA
UHGV-0204196_19	PHROG	phrog_2198	Alt-like transcription activator	transcription regulation
UHGV-0204196_19	UniRef90	UniRef90_A0A0V8DXT1	NA	NA
UHGV-0204196_19	eggNOG-mapper	1229517.AMFD01000018_gene191	NA	NA
UHGV-0204196_19	Pfam	PF05263	NA	DUF722
UHGV-0204196_19	Structural annotation	PF05263, MF_00674, TIGR01636, COG1595	NA	NA
UHGV-0204196_21	PHROG	phrog_8817	NA	unknown function
UHGV-0204196_21	UniRef90	UniRef90_A0A2Z5Z6C1	NA	NA
UHGV-0204196_21	Structural annotation	MF_00273, NF010188	NA	NA
UHGV-0204196_22	PHROG	phrog_9438	anti-repressor	transcription regulation
UHGV-0204196_22	UniRef90	UniRef90_Q38109	ORF23	NA
UHGV-0204196_22	eggNOG-mapper	1399942.U3PCU6_9CAUD	DNA binding	NA
UHGV-0204196_22	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0204196_23	PHROG	phrog_2670	NA	unknown function
UHGV-0204196_23	UniRef90	UniRef90_A0A7T3CDC1	NA	NA
UHGV-0204196_23	Pfam	PF07874	NA	DUF1660
UHGV-0204196_24	PHROG	phrog_2882	DNA methyltransferase	other
UHGV-0204196_24	UniRef90	UniRef90_A0A0V8E6V9	Putative C5 methylase (MAV1virus-like)	NA
UHGV-0204196_24	eggNOG-mapper	565653.EGBG_01954	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0204196_24	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0204196_24	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0204196_24	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0204196_25	PHROG	phrog_3808	NA	unknown function
UHGV-0204196_25	UniRef90	UniRef90_A0A1W6JKT3	Glycosyltransferase	NA
UHGV-0204196_26	PHROG	phrog_6209	NA	unknown function
UHGV-0204196_26	UniRef90	UniRef90_A0A1V0P3K7	NA	NA
UHGV-0204196_27	UniRef90	UniRef90_A0A1V0P397	NA	NA
UHGV-0204196_28	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0204196_28	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0204196_28	UniRef90	UniRef90_A0A2A5SYT7	Aminotransferase	NA
UHGV-0204196_28	eggNOG-mapper	1229517.AMFD01000023_gene1330	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	NA
UHGV-0204196_28	Pfam	PF00692	dUTPase	dUTPase
UHGV-0204196_28	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0204196_28	Structural annotation	PF00692, MF_00116, NF010561, COG0756	NA	NA
UHGV-0204196_29	PHROG	phrog_6648	NA	unknown function
UHGV-0204196_29	UniRef90	UniRef90_Q9AZU4	Orf28	NA
UHGV-0204196_30	PHROG	phrog_121	NA	unknown function
UHGV-0204196_30	UniRef90	UniRef90_UPI001CE244E3	NA	NA
UHGV-0204196_30	eggNOG-mapper	1229517.AMFD01000023_gene1331	NA	NA
UHGV-0204196_30	Pfam	PF07852	NA	DUF1642
UHGV-0204196_30	Structural annotation	PF07852	NA	NA
UHGV-0204196_31	PHROG	phrog_98	NA	unknown function
UHGV-0204196_31	UniRef90	UniRef90_A0A199YQC9	YopX domain-containing protein	NA
UHGV-0204196_31	eggNOG-mapper	201846.B5SP14_9CAUD	YopX protein	NA
UHGV-0204196_31	Pfam	PF09643	YopX protein	YopX
UHGV-0204196_31	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0204196_31	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0204196_32	PHROG	phrog_5080	NA	unknown function
UHGV-0204196_32	UniRef90	UniRef90_Q9MC28	ORF68a	NA
UHGV-0204196_33	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0204196_33	PHROG	phrog_34	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0204196_33	UniRef90	UniRef90_H5T0I2	Prophage pi1 protein 15	NA
UHGV-0204196_33	eggNOG-mapper	272623.L56509	NA	NA
UHGV-0204196_33	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0204196_34	PHROG	phrog_7699	NA	unknown function
UHGV-0204196_34	UniRef90	UniRef90_D2BK81	NA	NA
UHGV-0204196_35	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0204196_35	UniRef90	UniRef90_A0A0M2ZTQ1	Trehalose operon repressor, treR	NA
UHGV-0204196_35	eggNOG-mapper	420890.LCGL_1154	NA	NA
UHGV-0204196_35	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0204196_35	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0204196_35	Structural annotation	PF13730, MF_01909, NF040939, COG1846	NA	NA
UHGV-0204196_36	PHROG	phrog_959	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204196_36	UniRef90	UniRef90_S6F5Q7	Phage protein, putative DNA endonuclease	NA
UHGV-0204196_36	eggNOG-mapper	1229517.AMFD01000018_gene205	HNH endonuclease domain protein	NA
UHGV-0204196_36	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0204196_36	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0204196_37	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0204196_37	UniRef90	UniRef90_A0A0B8R0C7	Predicted ATP-dependent serine protease	NA
UHGV-0204196_37	Pfam	PF13479	AAA domain	AAA_24
UHGV-0204196_38	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0204196_38	UniRef90	UniRef90_D3LCD3	NA	NA
UHGV-0204196_38	Pfam	PF12705	PD-(D/E)XK nuclease superfamily	PDDEXK_1

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0204196	Yes	26,283 bps	36.08%	75.99%	0.9804
UHGV-1967301	No	22,090 bps	36.35%	63.80%	0.9786