vOTU-030818

Overview

vOTU representative UHGV-1922525

No. of genomes 2

Genome length 18,166 bps

Completeness 52.06% (medium-quality)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030818
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-08525 › vGENUS-23812 › vOTU-030818
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1922525
BioSample	NA
Genome length	18,166 bps
CheckV completeness	52.06% (medium-quality)
CheckV contamination	0.00%
CDS count	24
CDS density	94.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1922525_2	PHROG	phrog_962	holin	lysis
UHGV-1922525_2	UniRef90	UniRef90_A0A2V2EMI6	Phage holin	NA
UHGV-1922525_2	eggNOG-mapper	1120998.AUFC01000030_gene2252	Bacteriophage holin	NA
UHGV-1922525_2	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-1922525_2	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-1922525_2	COG	COG5546	NA	NA
UHGV-1922525_2	Structural annotation	COG5546	NA	NA
UHGV-1922525_3	PHROG	phrog_4257	NA	unknown function
UHGV-1922525_4	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1922525_4	PHROG	phrog_1794	amidase	lysis
UHGV-1922525_4	UniRef90	UniRef90_A0A1M7YM81	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1922525_4	eggNOG-mapper	592031.GCWU000322_00093	Ami_2	NA
UHGV-1922525_4	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-1922525_4	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-1922525_4	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-1922525_4	Structural annotation	PF01510, PF01471, MF_04111, NF008758, COG5632, COG3409	NA	NA
UHGV-1922525_8	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-1922525_8	PHROG	phrog_819	tail protein	tail
UHGV-1922525_8	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1922525_9	KOfam	K24214	OTOL1; otolin-1	NA
UHGV-1922525_9	PHROG	phrog_366	tail fiber protein	tail
UHGV-1922525_9	UniRef90	UniRef90_A0A374E9Q0	Collagen-like protein	NA
UHGV-1922525_9	eggNOG-mapper	33035.JPJF01000023_gene3228	NA	NA
UHGV-1922525_9	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-1922525_10	PHROG	phrog_13289	tail protein	tail
UHGV-1922525_10	UniRef90	UniRef90_A0A412AXS9	Peptidase S74 domain-containing protein	NA
UHGV-1922525_10	eggNOG-mapper	1235798.C817_02568	Prophage endopeptidase tail	NA
UHGV-1922525_10	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-1922525_10	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-1922525_10	COG	COG2885	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	NA
UHGV-1922525_10	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-1922525_11	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-1922525_11	UniRef90	UniRef90_A0A3R6C171	Phage tail protein	NA
UHGV-1922525_11	eggNOG-mapper	1235798.C817_02569	tail component	NA
UHGV-1922525_11	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-1922525_11	COG	COG4722	Phage-related protein YomH	NA
UHGV-1922525_11	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-1922525_12	PHROG	phrog_23464	NA	unknown function
UHGV-1922525_12	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-1922525_12	COG	COG5412	Phage-related protein	NA
UHGV-1922525_12	Structural annotation	PF20155, COG5280	NA	NA
UHGV-1922525_13	eggNOG-mapper	1235798.C817_04591	NA	NA
UHGV-1922525_13	Structural annotation	PF11836	NA	NA
UHGV-1922525_14	PHROG	phrog_88	major tail protein	tail
UHGV-1922525_14	UniRef90	UniRef90_A0A3D1FL93	Phage tail protein	NA
UHGV-1922525_14	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-1922525_14	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-1922525_14	Structural annotation	PF06488, PF18316, TIGR01603, COG3498	NA	NA
UHGV-1922525_15	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1922525_15	UniRef90	UniRef90_R6UNR2	HK97 gp10 family phage protein	NA
UHGV-1922525_15	eggNOG-mapper	1235798.C817_04589	NA	NA
UHGV-1922525_15	Structural annotation	TIGR01725	NA	NA
UHGV-1922525_16	eggNOG-mapper	1235798.C817_04588	NA	NA
UHGV-1922525_16	Structural annotation	PF05657	NA	NA
UHGV-1922525_17	PHROG	phrog_19734	NA	unknown function
UHGV-1922525_17	UniRef90	UniRef90_A0A3R6AW46	Head-tail adaptor protein	NA
UHGV-1922525_17	eggNOG-mapper	1235798.C817_04587	NA	NA
UHGV-1922525_17	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-1922525_18	PHROG	phrog_2550	NA	unknown function
UHGV-1922525_18	UniRef90	UniRef90_R5V091	Phage related protein	NA
UHGV-1922525_18	eggNOG-mapper	1235798.C817_04586	NA	NA
UHGV-1922525_18	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-1922525_19	PHROG	phrog_10	major head protein	head and packaging
UHGV-1922525_19	UniRef90	UniRef90_A0A1C6CI17	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1922525_19	eggNOG-mapper	1226322.HMPREF1545_00116	phage major capsid protein, HK97 family	NA
UHGV-1922525_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-1922525_19	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-1922525_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-1922525_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-1922525_19	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-1922525_20	KOfam	K06904	NA	NA
UHGV-1922525_20	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-1922525_20	UniRef90	UniRef90_UPI0008716C68	HK97 family phage prohead protease	NA
UHGV-1922525_20	eggNOG-mapper	33035.JPJF01000039_gene272	Caudovirus prohead serine protease	NA
UHGV-1922525_20	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-1922525_20	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-1922525_20	COG	COG3740	Phage head maturation protease	NA
UHGV-1922525_20	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-1922525_21	PHROG	phrog_12	portal protein	head and packaging
UHGV-1922525_21	UniRef90	UniRef90_A0A1Y4R7B9	Phage portal protein	NA
UHGV-1922525_21	eggNOG-mapper	1226322.HMPREF1545_00114	Phage portal protein, HK97 family	NA
UHGV-1922525_21	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-1922525_21	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-1922525_21	COG	COG4695	Phage portal protein BeeE	NA
UHGV-1922525_21	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1922525_22	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-1922525_22	UniRef90	UniRef90_A0A1Y4R6J8	Terminase	NA
UHGV-1922525_22	eggNOG-mapper	1226322.HMPREF1545_00113	Phage Terminase	NA
UHGV-1922525_22	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-1922525_22	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-1922525_22	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-1922525_22	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-1922525_23	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-1922525_23	UniRef90	UniRef90_A0A1C6H6I9	Phage terminase, small subunit	NA
UHGV-1922525_23	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-1922525_23	COG	COG3747	Phage terminase, small subunit	NA
UHGV-1922525_23	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1922525	Yes	18,166 bps	43.77%	52.06%	0.9828
UHGV-0207651	No	12,159 bps	43.62%	35.86%	0.9835