vOTU-030920

Overview

vOTU representative UHGV-0209827

No. of genomes 2

Genome length 30,125 bps

Completeness 52.24% (medium-quality)

Host Faecalibacterium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-030920
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00007 › vGENUS-00139 › vOTU-030920
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Faecalibacterium
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0209827
BioSample	SAMN10080930
Genome length	30,125 bps
CheckV completeness	52.24% (medium-quality)
CheckV contamination	0.00%
CDS count	64
CDS density	86.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0209827_2	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0209827_2	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0209827_2	UniRef90	UniRef90_A0A564SBR1	Replicative DNA helicase	NA
UHGV-0209827_2	eggNOG-mapper	1203606.HMPREF1526_01325	Participates in initiation and elongation during chromosome replication	NA
UHGV-0209827_2	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0209827_2	COG	COG0305	Replicative DNA helicase	NA
UHGV-0209827_2	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0209827_3	PHROG	phrog_678	replication initiation O-like	DNA, RNA and nucleotide metabolism
UHGV-0209827_3	Pfam	PF19808	NA	DUF6291
UHGV-0209827_3	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0209827_3	Structural annotation	PF19808	NA	NA
UHGV-0209827_10	UniRef90	UniRef90_UPI0012DD33A2	restriction endonuclease subunit M	NA
UHGV-0209827_10	eggNOG-mapper	596329.HMPREF0631_0252	restriction endonuclease	NA
UHGV-0209827_10	PADLOC	MTase_II_00176	Type II methyltransferase	RM
UHGV-0209827_10	COG	COG1002	Type II restriction/modification system, endonuclease and methylase domains	NA
UHGV-0209827_11	Pfam	PF18912	Double zinc ribbon domain	DZR_2
UHGV-0209827_12	Structural annotation	PF16677	NA	NA
UHGV-0209827_13	PHROG	phrog_924	NA	unknown function
UHGV-0209827_13	UniRef90	UniRef90_UPI000288284D	NA	NA
UHGV-0209827_13	Pfam	PF04448	NA	DUF551
UHGV-0209827_13	Structural annotation	NF041588	NA	NA
UHGV-0209827_17	Structural annotation	PF11998, COG5420	NA	NA
UHGV-0209827_19	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0209827_19	UniRef90	UniRef90_UPI001159D907	Holliday junction resolvase RecU	NA
UHGV-0209827_19	eggNOG-mapper	929506.CbC4_1203	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	NA
UHGV-0209827_19	Structural annotation	PF03838, MF_00130, NF002581, COG3331	NA	NA
UHGV-0209827_21	PHROG	phrog_35094	NA	unknown function
UHGV-0209827_21	eggNOG-mapper	457424.BFAG_02409	NA	NA
UHGV-0209827_23	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0209827_23	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0209827_23	UniRef90	UniRef90_D4JYK0	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0209827_23	eggNOG-mapper	718252.FP2_16350	C-5 cytosine-specific DNA methylase	NA
UHGV-0209827_23	PADLOC	oMTase_00004	orphan methyltransferase	RM
UHGV-0209827_23	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0209827_23	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0209827_23	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0209827_23	Structural annotation	PF00145, TIGR00675	NA	NA
UHGV-0209827_24	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0209827_24	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0209827_24	UniRef90	UniRef90_A0A6N7TNV3	Single-stranded DNA-binding protein	NA
UHGV-0209827_24	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0209827_24	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0209827_24	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0209827_24	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0209827_24	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0209827_24	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0209827_25	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0209827_25	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-0209827_25	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-0209827_25	Pfam	PF04404	ERF superfamily	ERF
UHGV-0209827_25	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0209827_26	PHROG	phrog_99	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0209827_26	UniRef90	UniRef90_A0A3G2N781	HNH endonuclease	NA
UHGV-0209827_26	eggNOG-mapper	232237.Q7Y5F9_9CAUD	HNH endonuclease	NA
UHGV-0209827_26	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0209827_28	eggNOG-mapper	857293.CAAU_1555	Probable zinc-ribbon domain	NA
UHGV-0209827_28	Pfam	PF13451	Probable zinc-ribbon domain	zf-trcl
UHGV-0209827_28	COG	COG1278	Cold shock protein, CspA family	NA
UHGV-0209827_28	Structural annotation	PF13451	NA	NA
UHGV-0209827_30	KOfam	K07738	nrdR; transcriptional repressor NrdR	NA
UHGV-0209827_30	UniRef90	UniRef90_A0A7Y4S123	Transcriptional repressor NrdR (Fragment)	NA
UHGV-0209827_30	eggNOG-mapper	1132855.KB913035_gene1070	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	NA
UHGV-0209827_30	Pfam	PF01096	Transcription factor S-II (TFIIS)	TFIIS_C
UHGV-0209827_30	COG	COG1327	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	NA
UHGV-0209827_30	Structural annotation	PF04606, NF007241	NA	NA
UHGV-0209827_31	Structural annotation	PF14143	NA	NA
UHGV-0209827_33	eggNOG-mapper	760568.Desku_0919	NA	NA
UHGV-0209827_33	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0209827_35	Structural annotation	TIGR03826	NA	NA
UHGV-0209827_37	Structural annotation	PF10922	NA	NA
UHGV-0209827_38	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0209827_38	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0209827_38	UniRef90	UniRef90_A0A844D5R9	Phage regulatory protein/antirepressor Ant	NA
UHGV-0209827_38	eggNOG-mapper	1449343.JQLQ01000002_gene1368	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0209827_38	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0209827_38	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0209827_38	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0209827_38	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-0209827_38	Structural annotation	PF03374, PF09669, TIGR02681, COG3645, COG3561	NA	NA
UHGV-0209827_39	PHROG	phrog_1468	transcriptional repressor	transcription regulation
UHGV-0209827_39	UniRef90	UniRef90_UPI001956DCC9	helix-turn-helix transcriptional regulator	NA
UHGV-0209827_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209827_39	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0209827_40	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0209827_40	UniRef90	UniRef90_UPI0004E125CC	helix-turn-helix transcriptional regulator	NA
UHGV-0209827_40	eggNOG-mapper	693746.OBV_43290	addiction module antidote protein HigA	NA
UHGV-0209827_40	COG	COG3093	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	NA
UHGV-0209827_41	Structural annotation	PF16311, NF038219	NA	NA
UHGV-0209827_45	UniRef90	UniRef90_A0A2A7AM70	HTH cro/C1-type domain-containing protein	NA
UHGV-0209827_45	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0209827_45	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0209827_46	PHROG	phrog_4402	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0209827_46	UniRef90	UniRef90_A0A0H5Q331	Rep_3 domain-containing protein	NA
UHGV-0209827_46	eggNOG-mapper	999413.HMPREF1094_04438	Initiator Replication protein	NA
UHGV-0209827_46	Pfam	PF01051	Initiator Replication protein, WH1	Rep3_N
UHGV-0209827_46	Pfam	PF21205	Initiator Rep protein, WH2	Rep3_C
UHGV-0209827_46	COG	COG5527	Protein involved in initiation of plasmid replication	NA
UHGV-0209827_46	Structural annotation	PF01051, PF21205, NF010305, COG5527	NA	NA
UHGV-0209827_48	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0209827_48	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0209827_48	UniRef90	UniRef90_A0A1C6BS15	Sporulation initiation inhibitor protein soj	NA
UHGV-0209827_48	eggNOG-mapper	1408423.JHYA01000021_gene392	Cellulose biosynthesis protein BcsQ	NA
UHGV-0209827_48	Pfam	PF13614	AAA domain	AAA_31
UHGV-0209827_48	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0209827_48	Structural annotation	PF13614, MF_00533, NF010443, COG1192	NA	NA
UHGV-0209827_50	Structural annotation	PF07878	NA	NA
UHGV-0209827_51	KOfam	K13525	VCP, CDC48; transitional endoplasmic reticulum ATPase	NA
UHGV-0209827_51	PHROG	phrog_3757	NA	unknown function
UHGV-0209827_51	UniRef90	UniRef90_A0A4Z0Y6M2	ATP-dependent zinc metalloprotease FtsH 3	NA
UHGV-0209827_51	eggNOG-mapper	768710.DesyoDRAFT_1087	ATPase family associated with various cellular activities (AAA)	NA
UHGV-0209827_51	PADLOC	IetA_00002	NA	ietAS
UHGV-0209827_51	Pfam	PF00004	ATPase family associated with various cellular activities (AAA)	AAA
UHGV-0209827_51	COG	COG0464	AAA+-type ATPase, SpoVK/Ycf46/Vps4 family	NA
UHGV-0209827_51	Structural annotation	PF00004, MF_00553, TIGR01242, COG1222	NA	NA
UHGV-0209827_52	Structural annotation	NF010188	NA	NA
UHGV-0209827_53	eggNOG-mapper	1378168.N510_03079	NA	NA
UHGV-0209827_54	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0209827_55	PHROG	phrog_16490	NA	unknown function
UHGV-0209827_55	eggNOG-mapper	397290.C810_05212	NA	NA
UHGV-0209827_56	PHROG	phrog_22984	NA	unknown function
UHGV-0209827_58	PHROG	phrog_5765	NA	unknown function
UHGV-0209827_58	UniRef90	UniRef90_UPI001D0EF465	BC1881 family protein	NA
UHGV-0209827_58	eggNOG-mapper	748727.CLJU_c31430	NA	NA
UHGV-0209827_58	NCBIFam	NF033495.1	BC1881 family protein	NA
UHGV-0209827_60	PHROG	phrog_15303	NA	unknown function
UHGV-0209827_62	KOfam	K07273	acm; lysozyme	NA
UHGV-0209827_62	PHROG	phrog_291	endolysin	lysis
UHGV-0209827_62	UniRef90	UniRef90_UPI001D0EE7D8	glycoside hydrolase family 25 protein	NA
UHGV-0209827_62	eggNOG-mapper	748224.HMPREF9436_00154	hydrolase, family 25	NA
UHGV-0209827_62	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0209827_62	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0209827_62	Structural annotation	PF01183, COG3757	NA	NA
UHGV-0209827_63	KOfam	K10804	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	NA
UHGV-0209827_63	PHROG	phrog_5240	tail fiber protein	tail
UHGV-0209827_63	UniRef90	UniRef90_A0A3E2TYR6	SGNH/GDSL hydrolase family protein	NA
UHGV-0209827_63	eggNOG-mapper	411463.EUBVEN_01828	lipolytic protein G-D-S-L family	NA
UHGV-0209827_63	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0209827_63	COG	COG2755	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	NA
UHGV-0209827_63	Structural annotation	PF16255, NF007819, COG2755	NA	NA
UHGV-0209827_64	eggNOG-mapper	657322.FPR_13550	Bacterial Ig-like domain (group 2)	NA
UHGV-0209827_64	COG	COG5492	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0209827	Yes	30,125 bps	48.26%	52.24%	0.9800
UHGV-1360824	No	27,220 bps	47.49%	47.18%	0.9792