| UHGV-0059160_1 | KOfam | K14059 | int; integrase | NA |
| UHGV-0059160_1 | PHROG | phrog_1 | integrase | integration and excision |
| UHGV-0059160_1 | UniRef90 | UniRef90_UPI001106575D | tyrosine-type recombinase/integrase | NA |
| UHGV-0059160_1 | eggNOG-mapper | 1125712.HMPREF1316_1553 | DNA integration | NA |
| UHGV-0059160_1 | Pfam | PF14659 | Phage integrase, N-terminal SAM-like domain | Phage_int_SAM_3 |
| UHGV-0059160_1 | COG | COG0582 | Integrase/recombinase, includes phage integrase | NA |
| UHGV-0059160_1 | Structural annotation | PF00589, MF_01808, TIGR02224, COG4974 | NA | NA |
| UHGV-0059160_2 | PHROG | phrog_6837 | NA | unknown function |
| UHGV-0059160_2 | Structural annotation | PF02701, TIGR04165 | NA | NA |
| UHGV-0059160_3 | KOfam | K22300 | dicA; HTH-type transcriptional regulator, cell division transcriptional repressor | NA |
| UHGV-0059160_3 | PHROG | phrog_8 | transcriptional regulator | transcription regulation |
| UHGV-0059160_3 | UniRef90 | UniRef90_A0A3N0BBP1 | HTH cro/C1-type domain-containing protein | NA |
| UHGV-0059160_3 | eggNOG-mapper | 742735.HMPREF9467_01754 | Helix-turn-helix XRE-family like proteins | NA |
| UHGV-0059160_3 | Pfam | PF01381 | Helix-turn-helix | HTH_3 |
| UHGV-0059160_3 | Structural annotation | PF01381, MF_02017, NF041951, COG1476 | NA | NA |
| UHGV-0059160_4 | UniRef90 | UniRef90_A0A2V2FRC8 | Transcriptional regulator | NA |
| UHGV-0059160_4 | eggNOG-mapper | 1282664.H354_06791 | Transcriptional regulator | NA |
| UHGV-0059160_4 | Pfam | PF01381 | Helix-turn-helix | HTH_3 |
| UHGV-0059160_4 | COG | COG1396 | Transcriptional regulator, contains XRE-family HTH domain | NA |
| UHGV-0059160_7 | KOfam | K07741 | antB; anti-repressor protein | NA |
| UHGV-0059160_7 | PHROG | phrog_130 | anti-repressor Ant | transcription regulation |
| UHGV-0059160_7 | UniRef90 | UniRef90_A0A087D547 | Phage antirepressor protein | NA |
| UHGV-0059160_7 | eggNOG-mapper | 78346.BRUM_0415 | BRO family, N-terminal domain | NA |
| UHGV-0059160_7 | Pfam | PF02498 | BRO family, N-terminal domain | Bro-N |
| UHGV-0059160_7 | Pfam | PF03374 | Phage antirepressor protein KilAC domain | ANT |
| UHGV-0059160_7 | COG | COG3617 | Prophage antirepressor | NA |
| UHGV-0059160_7 | Structural annotation | PF03374, PF02498, TIGR02681, COG3617, COG3645 | NA | NA |
| UHGV-0059160_8 | UniRef90 | UniRef90_UPI0013A6734E | helix-turn-helix domain-containing protein | NA |
| UHGV-0059160_9 | PHROG | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_9 | UniRef90 | UniRef90_UPI0011061354 | RusA family crossover junction endodeoxyribonuclease | NA |
| UHGV-0059160_9 | eggNOG-mapper | 1504822.CCNO01000013_gene309 | crossover junction endodeoxyribonuclease activity | NA |
| UHGV-0059160_9 | Pfam | PF05866 | Endodeoxyribonuclease RusA | RusA |
| UHGV-0059160_9 | COG | COG4570 | Holliday junction resolvase RusA (prophage-encoded endonuclease) | NA |
| UHGV-0059160_9 | Structural annotation | PF05866, NF007305, COG4570 | NA | NA |
| UHGV-0059160_10 | PHROG | phrog_434 | RecE-like recombination exonuclease | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_10 | UniRef90 | UniRef90_UPI00110603B3 | YqaJ viral recombinase family protein | NA |
| UHGV-0059160_10 | eggNOG-mapper | 1504822.CCNO01000015_gene597 | YqaJ viral recombinase family | NA |
| UHGV-0059160_10 | Pfam | PF09588 | YqaJ-like viral recombinase domain | YqaJ |
| UHGV-0059160_10 | NCBIFam | TIGR03033.1 | putative phage-type endonuclease | NA |
| UHGV-0059160_10 | COG | COG5377 | Phage-related protein, predicted endonuclease | NA |
| UHGV-0059160_10 | Structural annotation | PF09588, MF_03030, TIGR03033, COG5377 | NA | NA |
| UHGV-0059160_11 | KOfam | K07455 | recT; recombination protein RecT | NA |
| UHGV-0059160_11 | PHROG | phrog_148 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_11 | UniRef90 | UniRef90_UPI0014858083 | recombinase RecT | NA |
| UHGV-0059160_11 | eggNOG-mapper | 1504822.CCNO01000015_gene598 | DNA synthesis involved in double-strand break repair via homologous recombination | NA |
| UHGV-0059160_11 | Pfam | PF03837 | RecT family | RecT |
| UHGV-0059160_11 | NCBIFam | TIGR00616.1 | recombinase, phage RecT family | NA |
| UHGV-0059160_11 | COG | COG3723 | Recombinational DNA repair protein RecT | NA |
| UHGV-0059160_11 | Structural annotation | PF03837, NF007351, COG3723 | NA | NA |
| UHGV-0059160_12 | UniRef90 | UniRef90_A0A6N3DMH1 | 30S ribosomal protein S13 | NA |
| UHGV-0059160_12 | eggNOG-mapper | 561175.KB894098_gene5480 | Helix-hairpin-helix DNA-binding motif class 1 | NA |
| UHGV-0059160_12 | NCBIFam | NF041260.1 | integration host factor, actinobacterial type | NA |
| UHGV-0059160_12 | COG | COG0099 | Ribosomal protein S13 | NA |
| UHGV-0059160_12 | Structural annotation | PF00416, MF_01315, NF041260, COG0099 | NA | NA |
| UHGV-0059160_13 | KOfam | K03111 | ssb; single-strand DNA-binding protein | NA |
| UHGV-0059160_13 | PHROG | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_13 | UniRef90 | UniRef90_R6Z1V7 | Single-stranded DNA-binding protein | NA |
| UHGV-0059160_13 | eggNOG-mapper | 1118060.CAGZ01000028_gene971 | Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism | NA |
| UHGV-0059160_13 | Pfam | PF00436 | Single-strand binding protein family | SSB |
| UHGV-0059160_13 | NCBIFam | TIGR00621.2 | single-stranded DNA-binding protein | NA |
| UHGV-0059160_13 | COG | COG0629 | Single-stranded DNA-binding protein | NA |
| UHGV-0059160_13 | HAMAP | MF_00984 | Single-stranded DNA-binding protein | NA |
| UHGV-0059160_13 | Structural annotation | PF00436, MF_00984, NF005579, COG0629 | NA | NA |
| UHGV-0059160_16 | KOfam | K01520 | dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23] | NA |
| UHGV-0059160_16 | PHROG | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_16 | UniRef90 | UniRef90_UPI001E3E2DB2 | dUTP diphosphatase | NA |
| UHGV-0059160_16 | eggNOG-mapper | 936375.HMPREF1152_0316 | This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA | NA |
| UHGV-0059160_16 | Pfam | PF00692 | dUTPase | dUTPase |
| UHGV-0059160_16 | NCBIFam | NF001862.0 | dUTP diphosphatase | NA |
| UHGV-0059160_16 | COG | COG0756 | dUTP pyrophosphatase (dUTPase) | NA |
| UHGV-0059160_16 | Structural annotation | PF00692, MF_00116, NF001862, COG0756 | NA | NA |
| UHGV-0059160_17 | KOfam | K14415 | RTCB, rtcB; tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:6.5.1.8] | NA |
| UHGV-0059160_17 | PHROG | phrog_1075 | tRNA splicing ligase | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_17 | UniRef90 | UniRef90_A0A6N9JGK3 | RNA-splicing ligase RtcB | NA |
| UHGV-0059160_17 | eggNOG-mapper | 479437.Elen_2615 | Belongs to the RtcB family | NA |
| UHGV-0059160_17 | Pfam | PF01139 | tRNA-splicing ligase RtcB | RtcB |
| UHGV-0059160_17 | COG | COG1690 | RNA-splicing ligase RtcB, repairs tRNA damage | NA |
| UHGV-0059160_17 | Structural annotation | PF01139, MF_03144, NF007153, COG1690 | NA | NA |
| UHGV-0059160_19 | eggNOG-mapper | 1122201.AUAZ01000057_gene6 | NA | NA |
| UHGV-0059160_20 | KOfam | K00558 | DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] | NA |
| UHGV-0059160_20 | PHROG | phrog_26324 | DNA methyltransferase | other |
| UHGV-0059160_20 | UniRef90 | UniRef90_R9KXL4 | DNA (cytosine-5-)-methyltransferase | NA |
| UHGV-0059160_20 | eggNOG-mapper | 1235794.C811_01553 | DNA (cytosine-5-)-methyltransferase activity | NA |
| UHGV-0059160_20 | Pfam | PF00145 | C-5 cytosine-specific DNA methylase | DNA_methylase |
| UHGV-0059160_20 | COG | COG0270 | DNA-cytosine methylase | NA |
| UHGV-0059160_22 | Structural annotation | PF09889, MF_00649 | NA | NA |
| UHGV-0059160_24 | Pfam | PF11753 | NA | DUF3310 |
| UHGV-0059160_24 | Structural annotation | PF11753 | NA | NA |
| UHGV-0059160_28 | PHROG | phrog_986 | RNA-binding protein | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_28 | UniRef90 | UniRef90_A4E7A3 | NA | NA |
| UHGV-0059160_28 | eggNOG-mapper | 211110.gbs1152 | NA | NA |
| UHGV-0059160_28 | Pfam | PF12961 | NA | DUF3850 |
| UHGV-0059160_28 | Structural annotation | PF12961, MF_00684, NF003443, COG4043 | NA | NA |
| UHGV-0059160_32 | PHROG | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_32 | UniRef90 | UniRef90_UPI001E585BFA | NA | NA |
| UHGV-0059160_32 | eggNOG-mapper | 97138.C820_00250 | NA | NA |
| UHGV-0059160_32 | Pfam | PF14359 | NA | DUF4406 |
| UHGV-0059160_32 | Structural annotation | PF14359, COG3613 | NA | NA |
| UHGV-0059160_34 | PHROG | phrog_21525 | NA | unknown function |
| UHGV-0059160_37 | Structural annotation | NF033863 | NA | NA |
| UHGV-0059160_38 | PHROG | phrog_478 | site-specific recombination directionality factor RDF | integration and excision |
| UHGV-0059160_38 | UniRef90 | UniRef90_R6R5K5 | Protein 64 protein | NA |
| UHGV-0059160_38 | eggNOG-mapper | 1111121.HMPREF1247_0834 | NA | NA |
| UHGV-0059160_40 | PHROG | phrog_8489 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_40 | UniRef90 | UniRef90_UPI001105FF6B | replisome organizer | NA |
| UHGV-0059160_40 | eggNOG-mapper | 1139219.I569_00860 | DnaD domain protein | NA |
| UHGV-0059160_40 | COG | COG3935 | DNA replication protein DnaD | NA |
| UHGV-0059160_40 | Structural annotation | PF09681, TIGR01714 | NA | NA |
| UHGV-0059160_41 | KOfam | K02315 | dnaC; DNA replication protein DnaC | NA |
| UHGV-0059160_41 | PHROG | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_41 | UniRef90 | UniRef90_UPI00110588D4 | ATP-binding protein | NA |
| UHGV-0059160_41 | eggNOG-mapper | 1410625.JHWK01000005_gene1316 | IstB-like ATP binding protein | NA |
| UHGV-0059160_41 | Pfam | PF01695 | IstB-like ATP binding protein | IstB_IS21 |
| UHGV-0059160_41 | COG | COG1484 | DNA replication protein DnaC | NA |
| UHGV-0059160_41 | Structural annotation | PF01695, PF06827, MF_00377, NF005992, COG1484 | NA | NA |
| UHGV-0059160_43 | Structural annotation | PF06530 | NA | NA |
| UHGV-0059160_45 | Pfam | PF14297 | Lin1244/Lin1753-like, N-terminal | Lin1244_N |
| UHGV-0059160_46 | Structural annotation | PF09202 | NA | NA |
| UHGV-0059160_51 | PHROG | phrog_3007 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_52 | UniRef90 | UniRef90_UPI001C98641B | helix-turn-helix domain-containing protein | NA |
| UHGV-0059160_52 | Pfam | PF01381 | Helix-turn-helix | HTH_3 |
| UHGV-0059160_52 | COG | COG3636 | NA | NA |
| UHGV-0059160_52 | Structural annotation | PF20075, TIGR02612, COG1396 | NA | NA |
| UHGV-0059160_53 | KOfam | K14060 | pinR; putative DNA-invertase from lambdoid prophage Rac | NA |
| UHGV-0059160_53 | PHROG | phrog_125 | DNA invertase | DNA, RNA and nucleotide metabolism |
| UHGV-0059160_53 | UniRef90 | UniRef90_UPI001BB21D57 | recombinase family protein | NA |
| UHGV-0059160_53 | eggNOG-mapper | 1408423.JHYA01000001_gene988 | Resolvase, N terminal domain | NA |
| UHGV-0059160_53 | Pfam | PF00239 | Resolvase, N terminal domain | Resolvase |
| UHGV-0059160_53 | COG | COG1961 | Site-specific DNA recombinase SpoIVCA/DNA invertase PinE | NA |
| UHGV-0059160_53 | Structural annotation | PF00239, PF02796, MF_00489, NF009949, COG1961 | NA | NA |
| UHGV-0059160_54 | PHROG | phrog_38 | terminase large subunit | head and packaging |
| UHGV-0059160_54 | UniRef90 | UniRef90_UPI001106681D | phage terminase large subunit | NA |
| UHGV-0059160_54 | eggNOG-mapper | 1121866.AUGK01000003_gene1428 | chromosome segregation | NA |
| UHGV-0059160_54 | NCBIFam | TIGR01630.1 | phage terminase large subunit | NA |
| UHGV-0059160_54 | COG | COG5410 | NA | NA |
| UHGV-0059160_54 | Structural annotation | PF17289, PF04466, MF_04147, NF033889, COG5410, COG5362 | NA | NA |
| UHGV-0059160_55 | PHROG | phrog_64 | portal protein | head and packaging |
| UHGV-0059160_55 | UniRef90 | UniRef90_UPI0011063BFA | phage portal protein | NA |
| UHGV-0059160_55 | eggNOG-mapper | 1121866.AUGK01000003_gene1429 | Phage portal protein, SPP1 Gp6-like | NA |
| UHGV-0059160_55 | Pfam | PF05133 | Phage portal protein, SPP1 Gp6-like | Phage_prot_Gp6 |
| UHGV-0059160_55 | Structural annotation | PF05133, MF_04120, TIGR01538, COG5511 | NA | NA |