vOTU-035403

Overview

vOTU representative UHGV-2032509

No. of genomes 2

Genome length 35,366 bps

Completeness 51.67% (medium-quality)

Host CAG-475 sp900550855

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-035403
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00153 › vSUBFAM-06999 › vGENUS-18694 › vOTU-035403
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › CAG-917 › CAG-475 › CAG-475 sp900550855
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2032509
BioSample	NA
Genome length	35,366 bps
CheckV completeness	51.67% (medium-quality)
CheckV contamination	0.00%
CDS count	54
CDS density	95.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2032509_1	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-2032509_1	PHROG	phrog_498	DNA methyltransferase	other
UHGV-2032509_1	UniRef90	UniRef90_A0A7C6WAH1	Site-specific DNA-methyltransferase (Fragment)	NA
UHGV-2032509_1	eggNOG-mapper	272558.10176159	DNA methylase	NA
UHGV-2032509_1	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-2032509_1	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-2032509_1	COG	COG0863	DNA modification methylase	NA
UHGV-2032509_2	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2032509_2	UniRef90	UniRef90_A0A1T4M0N5	HNH endonuclease	NA
UHGV-2032509_2	eggNOG-mapper	1089548.KI783301_gene3222	HNH endonuclease	NA
UHGV-2032509_2	Pfam	PF01844	HNH endonuclease	HNH
UHGV-2032509_2	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-2032509_3	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-2032509_3	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-2032509_3	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-2032509_3	COG	COG3747	Phage terminase, small subunit	NA
UHGV-2032509_4	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-2032509_4	UniRef90	UniRef90_UPI00141516AC	terminase large subunit	NA
UHGV-2032509_4	eggNOG-mapper	471855.Shel_08190	Phage Terminase	NA
UHGV-2032509_4	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-2032509_4	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-2032509_4	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-2032509_4	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-2032509_5	PHROG	phrog_12	portal protein	head and packaging
UHGV-2032509_5	UniRef90	UniRef90_A0A1L5F2X8	Portal protein	NA
UHGV-2032509_5	eggNOG-mapper	1443122.Z958_05975	Portal protein	NA
UHGV-2032509_5	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-2032509_5	COG	COG4695	Phage portal protein BeeE	NA
UHGV-2032509_5	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-2032509_6	KOfam	K06904	NA	NA
UHGV-2032509_6	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-2032509_6	UniRef90	UniRef90_A0A3C0IZ06	HK97 family phage prohead protease	NA
UHGV-2032509_6	eggNOG-mapper	1232428.CAVO010000003_gene1010	Caudovirus prohead serine protease	NA
UHGV-2032509_6	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-2032509_6	COG	COG3740	Phage head maturation protease	NA
UHGV-2032509_6	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-2032509_7	PHROG	phrog_10	major head protein	head and packaging
UHGV-2032509_7	UniRef90	UniRef90_A0A356CXS9	Phage major capsid protein	NA
UHGV-2032509_7	eggNOG-mapper	1160721.RBI_I01582	Phage capsid family	NA
UHGV-2032509_7	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-2032509_7	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-2032509_7	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-2032509_7	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-2032509_9	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-2032509_9	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-2032509_14	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-2032509_15	PHROG	phrog_8125	tail length tape measure protein	tail
UHGV-2032509_15	UniRef90	UniRef90_V9HUK2	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-2032509_15	eggNOG-mapper	1121289.JHVL01000019_gene659	tape measure	NA
UHGV-2032509_15	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-2032509_15	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-2032509_16	Structural annotation	PF16774, PF21766, TIGR01633, COG4722	NA	NA
UHGV-2032509_17	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-2032509_25	PHROG	phrog_5302	tail protein	tail
UHGV-2032509_25	UniRef90	UniRef90_UPI001951D0C2	fibronectin type III domain-containing protein	NA
UHGV-2032509_25	eggNOG-mapper	1151292.QEW_0671	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-2032509_25	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-2032509_25	Structural annotation	PF14686, TIGR03000, COG1262	NA	NA
UHGV-2032509_26	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-2032509_26	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-2032509_26	UniRef90	UniRef90_A0A1Q6RLC1	Reverse transcriptase domain-containing protein	NA
UHGV-2032509_26	eggNOG-mapper	755164.D6PSR5_9CAUD	RNA-directed DNA polymerase activity	NA
UHGV-2032509_26	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-2032509_26	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-2032509_26	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-2032509_31	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-2032509_31	PHROG	phrog_95	integrase	integration and excision
UHGV-2032509_31	UniRef90	UniRef90_A5TXM5	Possible recombinase	NA
UHGV-2032509_31	eggNOG-mapper	393480.FNP_1879	Recombinase zinc beta ribbon domain	NA
UHGV-2032509_31	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-2032509_31	Pfam	PF07508	Recombinase	Recombinase
UHGV-2032509_31	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-2032509_31	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-2032509_31	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-2032509_32	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-2032509_32	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2032509_32	UniRef90	UniRef90_A0A355V480	HTH cro/C1-type domain-containing protein	NA
UHGV-2032509_32	eggNOG-mapper	1235792.C808_01156	Helix-turn-helix XRE-family like proteins	NA
UHGV-2032509_32	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2032509_32	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2032509_33	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-2032509_33	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2032509_33	UniRef90	UniRef90_A0A355V480	HTH cro/C1-type domain-containing protein	NA
UHGV-2032509_33	eggNOG-mapper	411471.SUBVAR_06896	Helix-turn-helix	NA
UHGV-2032509_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2032509_33	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2032509_37	UniRef90	UniRef90_A0A6C1EKW5	Helix-turn-helix domain-containing protein	NA
UHGV-2032509_37	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2032509_40	PHROG	phrog_2044	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
UHGV-2032509_40	UniRef90	UniRef90_A0A4D6BGB6	Putative DNA-directed RNA polymerase	NA
UHGV-2032509_40	eggNOG-mapper	552396.HMPREF0863_02432	NA	NA
UHGV-2032509_40	Structural annotation	MF_00337, NF010671, COG1722	NA	NA
UHGV-2032509_41	PHROG	phrog_1891	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-2032509_41	UniRef90	UniRef90_UPI0004648050	HNH endonuclease	NA
UHGV-2032509_41	eggNOG-mapper	696281.Desru_1079	HNH endonuclease	NA
UHGV-2032509_41	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-2032509_43	PHROG	phrog_5968	replisome organizer	DNA, RNA and nucleotide metabolism
UHGV-2032509_43	eggNOG-mapper	1033737.CAEV01000029_gene310	N-terminal phage replisome organiser (Phage_rep_org_N)	NA
UHGV-2032509_43	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-2032509_43	COG	COG3935	DNA replication protein DnaD	NA
UHGV-2032509_50	PHROG	phrog_98	NA	unknown function
UHGV-2032509_50	UniRef90	UniRef90_A0A3D2DZW6	YopX domain-containing protein	NA
UHGV-2032509_50	Pfam	PF09643	YopX protein	YopX
UHGV-2032509_50	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-2032509_51	PHROG	phrog_3136	NA	unknown function
UHGV-2032509_51	UniRef90	UniRef90_UPI001C02A61B	ASCH domain-containing protein	NA
UHGV-2032509_51	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-2032509_51	Structural annotation	PF12961, NF008917, COG4933	NA	NA
UHGV-2032509_53	PHROG	phrog_498	DNA methyltransferase	other
UHGV-2032509_53	UniRef90	UniRef90_A0A2H4JBH5	Putative transferase	NA
UHGV-2032509_53	eggNOG-mapper	572544.Ilyop_1048	DNA methylase	NA
UHGV-2032509_53	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-2032509_53	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-2032509_53	COG	COG0863	DNA modification methylase	NA
UHGV-2032509_53	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-2032509_54	PHROG	phrog_498	DNA methyltransferase	other
UHGV-2032509_54	UniRef90	UniRef90_A0A2H4JHY6	Putative transferase	NA
UHGV-2032509_54	eggNOG-mapper	12402.Q708N6_9CAUD	N-methyltransferase activity	NA
UHGV-2032509_54	PADLOC	MTase_II_00015	Type II methyltransferase	RM

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2032509	Yes	35,366 bps	47.73%	51.67%	0.9729
UHGV-1459238	No	24,073 bps	47.95%	70.67%	0.9708