vOTU-035756

Overview

vOTU representative UHGV-1983402

No. of genomes 5

Genome length 18,301 bps

Completeness 78.96% (medium-quality)

Host CAG-103

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-035756
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes › Salasmaviridae
Taxonomy (UHGV)	vFAM-00015 › vSUBFAM-03890 › vGENUS-06127 › vOTU-035756
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-103
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1983402
BioSample	SAMN03922539
Genome length	18,301 bps
CheckV completeness	78.96% (medium-quality)
CheckV contamination	0.00%
CDS count	23
CDS density	92.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1983402_1	PHROG	phrog_4898	holin	lysis
UHGV-1983402_2	PHROG	phrog_21357	endolysin	lysis
UHGV-1983402_2	UniRef90	UniRef90_A0A3R6VA19	CHAP domain-containing protein	NA
UHGV-1983402_2	eggNOG-mapper	665950.HMPREF1025_01328	CHAP domain	NA
UHGV-1983402_2	Pfam	PF05257	CHAP domain	CHAP
UHGV-1983402_2	Pfam	PF18013	Phage tail lysozyme	Phage_lysozyme2
UHGV-1983402_2	COG	COG1388	LysM repeat	NA
UHGV-1983402_2	Structural annotation	PF18013	NA	NA
UHGV-1983402_4	PHROG	phrog_2006	major head protein	head and packaging
UHGV-1983402_4	UniRef90	UniRef90_A0A843HQR2	Ig-like domain-containing protein	NA
UHGV-1983402_4	eggNOG-mapper	10753.B7SSM8_BPNF	viral capsid	NA
UHGV-1983402_4	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-1983402_4	Structural annotation	PF19821, PF02368, MF_04119, NF033394, COG1659	NA	NA
UHGV-1983402_5	PHROG	phrog_2248	tail protein	tail
UHGV-1983402_5	UniRef90	UniRef90_A0A843GTI5	Caud_tail_N domain-containing protein	NA
UHGV-1983402_5	eggNOG-mapper	12345.Q9FZW6_BPGA1	NA	NA
UHGV-1983402_5	Pfam	PF16838	Caudoviral major tail protein N-terminus	Caud_tail_N
UHGV-1983402_5	Pfam	PF20934	Bacillus phage phi29, Tail knob protein gp9, C-terminal domain	phi29_gp9_C
UHGV-1983402_5	Structural annotation	PF20934, PF16838	NA	NA
UHGV-1983402_6	PHROG	phrog_2038	upper collar connector	connector
UHGV-1983402_6	UniRef90	UniRef90_A0A345MZG5	Upper collar protein	NA
UHGV-1983402_6	eggNOG-mapper	10756.PORTL_BPPH2	Phage Connector (GP10)	NA
UHGV-1983402_6	Pfam	PF05352	Phage Connector (GP10)	Phage_connector
UHGV-1983402_6	Structural annotation	PF05352, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-1983402_7	PHROG	phrog_3225	adaptor Ad4	connector
UHGV-1983402_9	KOfam	K01104	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	NA
UHGV-1983402_9	UniRef90	UniRef90_K1TUF3	Protein tyrosine/serine phosphatase (Fragment)	NA
UHGV-1983402_9	eggNOG-mapper	4922.CAY69141	Saccharomyces cerevisiae YDL057w	NA
UHGV-1983402_9	Pfam	PF13350	Tyrosine phosphatase family	Y_phosphatase3
UHGV-1983402_9	COG	COG1073	NA	NA
UHGV-1983402_9	Structural annotation	PF13350, TIGR01244, COG2365	NA	NA
UHGV-1983402_10	PHROG	phrog_21357	endolysin	lysis
UHGV-1983402_10	UniRef90	UniRef90_R5LUK1	Peptidase C51 domain-containing protein	NA
UHGV-1983402_10	eggNOG-mapper	97139.C824_00684	lysozyme activity	NA
UHGV-1983402_10	Pfam	PF05257	CHAP domain	CHAP
UHGV-1983402_10	COG	COG1388	LysM repeat	NA
UHGV-1983402_10	Structural annotation	PF10030, TIGR02594, COG4322	NA	NA
UHGV-1983402_11	PHROG	phrog_2150	terminase	head and packaging
UHGV-1983402_11	UniRef90	UniRef90_A0A843HRH6	Phage DNA encapsidation protein	NA
UHGV-1983402_11	eggNOG-mapper	10753.B7SSN7_BPNF	Podovirus DNA encapsidation protein (Gp16)	NA
UHGV-1983402_11	Pfam	PF05894	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
UHGV-1983402_11	Structural annotation	PF05894, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-1983402_12	PHROG	phrog_757	DNA methyltransferase	other
UHGV-1983402_12	UniRef90	UniRef90_A0A3E2U1Y9	DNA cytosine methyltransferase	NA
UHGV-1983402_12	eggNOG-mapper	748224.HMPREF9436_03069	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-1983402_12	COG	COG0270	DNA-cytosine methylase	NA
UHGV-1983402_12	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-1983402_13	KOfam	K21237	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	NA
UHGV-1983402_13	PHROG	phrog_1907	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-1983402_13	UniRef90	UniRef90_A0A843HKN8	DNA-directed DNA polymerase	NA
UHGV-1983402_13	eggNOG-mapper	10753.DPOL_BPNF	nucleotide binding	NA
UHGV-1983402_13	Pfam	PF03175	DNA polymerase type B, organellar and viral	DNA_pol_B_2
UHGV-1983402_13	Structural annotation	PF03175, MF_04055, NF004415, COG0417	NA	NA
UHGV-1983402_19	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1983402_19	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1983402_19	UniRef90	UniRef90_UPI000C768D7D	single-stranded DNA-binding protein	NA
UHGV-1983402_19	eggNOG-mapper	1120998.AUFC01000030_gene2217	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-1983402_19	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1983402_19	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1983402_19	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1983402_19	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1983402_19	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1983402_20	Structural annotation	MF_00273	NA	NA
UHGV-1983402_22	Structural annotation	PF01206, TIGR04140, COG3870	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1983402	Yes	18,301 bps	45.46%	78.96%	0.9800
UHGV-0132127	No	17,952 bps	45.55%	77.45%	0.9803
UHGV-1394471	No	17,952 bps	45.55%	77.45%	0.9803
UHGV-1480415	No	17,252 bps	45.50%	75.26%	0.9811
UHGV-0183629	No	17,202 bps	45.51%	75.04%	0.9811