vOTU-041125

Overview

vOTU representative UHGV-2219706

No. of genomes 2

Genome length 24,897 bps

Completeness 66.85% (medium-quality)

Host Eubacterium F sp003491505

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-041125
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-02051 › vGENUS-02339 › vOTU-041125
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Eubacterium F › Eubacterium F sp003491505
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-2219706
BioSample	NA
Genome length	24,897 bps
CheckV completeness	66.85% (medium-quality)
CheckV contamination	0.00%
CDS count	32
CDS density	92.57%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-2219706_1	KOfam	K04079	HSP90A, htpG; molecular chaperone HtpG	NA
UHGV-2219706_1	UniRef90	UniRef90_A0A3R6JCR9	Molecular chaperone HtpG	NA
UHGV-2219706_1	eggNOG-mapper	1410631.JHWZ01000003_gene1657	Hsp90 protein	NA
UHGV-2219706_1	Pfam	PF13589	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	HATPase_c_3
UHGV-2219706_1	Pfam	PF00183	Hsp90 protein	HSP90
UHGV-2219706_1	NCBIFam	NF003555.1	molecular chaperone HtpG	NA
UHGV-2219706_1	COG	COG0326	Molecular chaperone, HSP90 family	NA
UHGV-2219706_2	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-2219706_2	PHROG	phrog_1	integrase	integration and excision
UHGV-2219706_2	UniRef90	UniRef90_K1SKL7	Protein containing Integrase, catalytic core, phage domain protein	NA
UHGV-2219706_2	eggNOG-mapper	411459.RUMOBE_02516	NA	NA
UHGV-2219706_2	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2219706_2	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2219706_3	KOfam	K14059	int; integrase	NA
UHGV-2219706_3	PHROG	phrog_1	integrase	integration and excision
UHGV-2219706_3	UniRef90	UniRef90_A0A1C5NL57	Integrase	NA
UHGV-2219706_3	eggNOG-mapper	1235798.C817_00393	DNA binding domain of tn916 integrase	NA
UHGV-2219706_3	Pfam	PF02920	DNA binding domain of tn916 integrase	Integrase_DNA
UHGV-2219706_3	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-2219706_3	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-2219706_3	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-2219706_3	Structural annotation	PF02920, PF00589, PF13102, MF_01808, NF007246, COG4974	NA	NA
UHGV-2219706_4	PHROG	phrog_16129	excisionase	integration and excision
UHGV-2219706_4	UniRef90	UniRef90_A0A1Y4CHH6	Transposase	NA
UHGV-2219706_4	eggNOG-mapper	411467.BACCAP_04675	Excisionase from transposon Tn916	NA
UHGV-2219706_4	Pfam	PF09035	Excisionase from transposon Tn916	Tn916-Xis
UHGV-2219706_4	Structural annotation	PF09035, TIGR01764	NA	NA
UHGV-2219706_5	eggNOG-mapper	1235800.C819_02253	NA	NA
UHGV-2219706_6	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-2219706_6	PHROG	phrog_28876	metal-dependent phosphohydrolase	other
UHGV-2219706_6	UniRef90	UniRef90_A0A373LVX6	HD domain-containing protein	NA
UHGV-2219706_6	eggNOG-mapper	97139.C824_00737	PFAM HD domain	NA
UHGV-2219706_6	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-2219706_6	Structural annotation	PF07514, MF_01427, NF010007, COG3481	NA	NA
UHGV-2219706_9	PHROG	phrog_15077	NA	unknown function
UHGV-2219706_9	UniRef90	UniRef90_A0A3A6HZA9	NA	NA
UHGV-2219706_9	eggNOG-mapper	1280698.AUJS01000007_gene1019	NA	NA
UHGV-2219706_9	Structural annotation	PF11300, NF038070	NA	NA
UHGV-2219706_11	PHROG	phrog_7566	NA	unknown function
UHGV-2219706_11	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-2219706_11	eggNOG-mapper	411902.CLOBOL_05695	NA	NA
UHGV-2219706_12	PHROG	phrog_8470	NA	unknown function
UHGV-2219706_12	UniRef90	UniRef90_UPI00164CA24C	PcfJ domain-containing protein	NA
UHGV-2219706_12	eggNOG-mapper	1235790.C805_00306	PcfJ-like protein	NA
UHGV-2219706_12	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-2219706_12	Structural annotation	PF14284	NA	NA
UHGV-2219706_13	UniRef90	UniRef90_UPI0008BD6C31	Cas9 inhibitor AcrIIA9 family protein	NA
UHGV-2219706_13	eggNOG-mapper	1235792.C808_00065	NA	NA
UHGV-2219706_14	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-2219706_15	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-2219706_15	eggNOG-mapper	642492.Clole_0725	NA	NA
UHGV-2219706_15	Structural annotation	PF21578, NF041486	NA	NA
UHGV-2219706_18	PHROG	phrog_11237	NA	unknown function
UHGV-2219706_18	eggNOG-mapper	478749.BRYFOR_08581	NA	NA
UHGV-2219706_19	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-2219706_19	PHROG	phrog_6380	DNA methyltransferase	other
UHGV-2219706_19	UniRef90	UniRef90_A0A2V2D6Q6	N6_Mtase domain-containing protein	NA
UHGV-2219706_19	eggNOG-mapper	1444306.JFZC01000034_gene2643	type I restriction-modification system	NA
UHGV-2219706_19	PADLOC	MTase_I_00005	Type I methyltransferase	RM
UHGV-2219706_19	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-2219706_19	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-2219706_19	Structural annotation	PF02384, MF_01872, TIGR00497, COG0286	NA	NA
UHGV-2219706_20	PHROG	phrog_874	NA	unknown function
UHGV-2219706_20	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-2219706_20	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-2219706_21	PHROG	phrog_750	NA	unknown function
UHGV-2219706_21	eggNOG-mapper	97139.C824_00051	NA	NA
UHGV-2219706_21	Structural annotation	PF03444, COG5045	NA	NA
UHGV-2219706_24	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-2219706_24	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-2219706_24	UniRef90	UniRef90_UPI001D06FE9D	helix-turn-helix transcriptional regulator	NA
UHGV-2219706_24	eggNOG-mapper	411470.RUMGNA_02181	DNA-binding helix-turn-helix protein	NA
UHGV-2219706_24	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-2219706_24	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-2219706_24	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-2219706_26	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-2219706_26	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-2219706_26	UniRef90	UniRef90_A0A1M6B7T2	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2219706_26	eggNOG-mapper	410358.Mlab_0037	Cro/C1-type HTH DNA-binding domain	NA
UHGV-2219706_26	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-2219706_26	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-2219706_27	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-2219706_29	PHROG	phrog_1220	head protein	head and packaging
UHGV-2219706_29	UniRef90	UniRef90_R6SMG3	Conserved domain protein	NA
UHGV-2219706_29	eggNOG-mapper	1145276.T479_16185	NA	NA
UHGV-2219706_30	PHROG	phrog_538	minor tail protein	tail
UHGV-2219706_30	UniRef90	UniRef90_A0A1I7FBJ0	Virus ReqiPepy6 Gp37-like protein	NA
UHGV-2219706_30	eggNOG-mapper	428125.CLOLEP_01424	NA	NA
UHGV-2219706_30	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-2219706_30	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-2219706_31	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-2219706_31	UniRef90	UniRef90_UPI001D088A46	phage tail family protein	NA
UHGV-2219706_31	eggNOG-mapper	428125.CLOLEP_01423	Phage tail protein	NA
UHGV-2219706_31	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-2219706_31	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-2219706_32	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-2219706_32	PHROG	phrog_5218	NA	unknown function
UHGV-2219706_32	UniRef90	UniRef90_A0A415G8B3	PhageMin_Tail domain-containing protein	NA
UHGV-2219706_32	eggNOG-mapper	999413.HMPREF1094_02001	Phage-related minor tail protein	NA
UHGV-2219706_32	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-2219706_32	COG	COG5280	Phage-related minor tail protein	NA
UHGV-2219706_32	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-2219706	Yes	24,897 bps	41.25%	66.85%	0.9723
UHGV-2003748	No	16,894 bps	40.52%	39.96%	0.9458