vOTU-042591

Overview

No. of genomes 1

Genome length 59,306 bps

Completeness 100.00% (complete)

Host Clostridium P perfringens

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-042591
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00201 › vSUBFAM-02496 › vGENUS-13639 › vSUBGEN-22110 › vOTU-042591
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium P › Clostridium P perfringens
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0010769
BioSample	SAMEA4765861
Genome length	59,306 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	87
CDS density	89.78%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0010769_3	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0010769_3	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0010769_3	UniRef90	UniRef90_A0A6I3SP06	DNA polymerase I	NA
UHGV-0010769_3	eggNOG-mapper	370438.PTH_2158	3'-5' exonuclease	NA
UHGV-0010769_3	PADLOC	drt-cluster58	DRT	DRT
UHGV-0010769_3	Pfam	PF01612	3'-5' exonuclease	DNA_pol_A_exo1
UHGV-0010769_3	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0010769_3	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0010769_3	Structural annotation	PF00476, PF01612, MF_04101, NF004397, COG0749	NA	NA
UHGV-0010769_7	PHROG	phrog_139	deoxynucleoside monophosphate kinase	other
UHGV-0010769_7	UniRef90	UniRef90_UPI000BED016D	AAA family ATPase	NA
UHGV-0010769_7	eggNOG-mapper	1121468.AUBR01000096_gene774	PFAM CMP dCMP deaminase zinc-binding	NA
UHGV-0010769_7	Pfam	PF21448	Deoxynucleotide monophosphate kinase	DNMK
UHGV-0010769_7	COG	COG0237	Dephospho-CoA kinase	NA
UHGV-0010769_8	KOfam	K09787	NA	NA
UHGV-0010769_8	UniRef90	UniRef90_A0A097ARU7	UPF0122 protein TKV_c13790	NA
UHGV-0010769_8	eggNOG-mapper	2325.TKV_c13790	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein	NA
UHGV-0010769_8	Pfam	PF04297	Putative helix-turn-helix protein, YlxM / p13 like	UPF0122
UHGV-0010769_8	COG	COG2739	Predicted DNA-binding protein YlxM, UPF0122 family	NA
UHGV-0010769_12	PHROG	phrog_7168	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0010769_15	eggNOG-mapper	865861.AZSU01000003_gene2153	NA	NA
UHGV-0010769_24	PHROG	phrog_16226	NA	unknown function
UHGV-0010769_25	PHROG	phrog_7344	terminase small subunit	head and packaging
UHGV-0010769_25	UniRef90	UniRef90_A0A7U5D4K2	HTH_Tnp_1_2 domain-containing protein	NA
UHGV-0010769_25	eggNOG-mapper	485916.Dtox_3917	Helix-turn-helix of insertion element transposase	NA
UHGV-0010769_25	Pfam	PF13022	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
UHGV-0010769_25	Structural annotation	PF13022	NA	NA
UHGV-0010769_27	eggNOG-mapper	720555.BATR1942_09880	NA	NA
UHGV-0010769_28	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-0010769_28	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-0010769_28	UniRef90	UniRef90_A0A1L6ZJC3	DNA invertase Pin	NA
UHGV-0010769_28	eggNOG-mapper	720555.BATR1942_09875	resolvase	NA
UHGV-0010769_28	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0010769_28	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0010769_28	Structural annotation	PF00239, PF02796, NF009949, COG1961	NA	NA
UHGV-0010769_29	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0010769_29	UniRef90	UniRef90_UPI001C9B5E45	phage terminase large subunit	NA
UHGV-0010769_29	eggNOG-mapper	370438.PTH_2193	TIGRFAM Phage uncharacterised protein, C-terminal	NA
UHGV-0010769_29	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0010769_29	COG	COG5362	Phage terminase large subunit	NA
UHGV-0010769_29	Structural annotation	PF17289, PF03354, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0010769_30	PHROG	phrog_533	portal protein	head and packaging
UHGV-0010769_30	UniRef90	UniRef90_UPI001C9B229E	phage portal protein	NA
UHGV-0010769_30	eggNOG-mapper	485916.Dtox_3907	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0010769_30	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0010769_30	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0010769_31	PHROG	phrog_4611	minor head protein	head and packaging
UHGV-0010769_31	UniRef90	UniRef90_UPI00165D57BE	minor capsid protein	NA
UHGV-0010769_31	eggNOG-mapper	485916.Dtox_3906	Phage minor capsid protein 2	NA
UHGV-0010769_31	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0010769_33	PHROG	phrog_212	major head protein	head and packaging
UHGV-0010769_33	UniRef90	UniRef90_UPI000BFC9E2E	phage major capsid protein	NA
UHGV-0010769_33	eggNOG-mapper	720555.BATR1942_09850	NA	NA
UHGV-0010769_33	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0010769_34	eggNOG-mapper	720555.BATR1942_09840	NA	NA
UHGV-0010769_35	eggNOG-mapper	240302.BN982_04112	NA	NA
UHGV-0010769_36	eggNOG-mapper	720555.BATR1942_09830	NA	NA
UHGV-0010769_37	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0010769_38	PHROG	phrog_1407	major tail protein	tail
UHGV-0010769_38	UniRef90	UniRef90_A0A1L6ZJA9	Phage major tail protein, TP901-1 family	NA
UHGV-0010769_38	eggNOG-mapper	720555.BATR1942_09820	Phage tail tube protein	NA
UHGV-0010769_38	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0010769_38	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-0010769_38	COG	COG5437	Phage tail protein, TP901-1 family	NA
UHGV-0010769_38	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0010769_42	PHROG	phrog_8908	NA	unknown function
UHGV-0010769_42	Structural annotation	NF040910	NA	NA
UHGV-0010769_43	PHROG	phrog_6782	tail fiber protein	tail
UHGV-0010769_43	UniRef90	UniRef90_UPI00195AA6D5	BppU family phage baseplate upper protein	NA
UHGV-0010769_43	eggNOG-mapper	1391647.AVSV01000022_gene2575	NA	NA
UHGV-0010769_43	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0010769_43	Structural annotation	PF10651, NF032891	NA	NA
UHGV-0010769_44	KOfam	K20254	PLIN4; perilipin-4	NA
UHGV-0010769_44	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0010769_44	eggNOG-mapper	1476973.JMMB01000007_gene1771	Phage-related minor tail protein	NA
UHGV-0010769_44	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0010769_44	Pfam	PF04513	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
UHGV-0010769_44	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0010769_44	COG	COG5283	Phage-related tail protein	NA
UHGV-0010769_45	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0010769_45	UniRef90	UniRef90_UPI001432C492	phage tail family protein	NA
UHGV-0010769_45	eggNOG-mapper	720555.BATR1942_09800	Phage tail protein	NA
UHGV-0010769_45	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0010769_45	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0010769_45	COG	COG4722	Phage-related protein YomH	NA
UHGV-0010769_45	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0010769_46	PHROG	phrog_12312	virion structural protein	head and packaging
UHGV-0010769_46	eggNOG-mapper	1329516.JPST01000005_gene1273	Prophage endopeptidase tail	NA
UHGV-0010769_46	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0010769_46	COG	COG4926	Phage-related protein	NA
UHGV-0010769_48	PHROG	phrog_1193	hemolysin	other
UHGV-0010769_48	UniRef90	UniRef90_A0A1M6RYX1	Haemolysin XhlA	NA
UHGV-0010769_48	eggNOG-mapper	1540257.JQMW01000009_gene3388	Haemolysin XhlA	NA
UHGV-0010769_49	UniRef90	UniRef90_A0A0J8G5Z2	Bacteriophage holin	NA
UHGV-0010769_50	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0010769_50	PHROG	phrog_435	endolysin	lysis
UHGV-0010769_50	UniRef90	UniRef90_UPI001E651766	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0010769_50	eggNOG-mapper	1243664.CAVL020000019_gene3741	Ami_3	NA
UHGV-0010769_50	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0010769_50	Pfam	PF05036	SPOR domain	SPOR
UHGV-0010769_50	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0010769_50	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0010769_51	KOfam	K21527	mom; adenine modification enzyme [EC:2.3.1.-]	NA
UHGV-0010769_51	PHROG	phrog_1384	Mom-like DNA modification protein	other
UHGV-0010769_51	UniRef90	UniRef90_A0A7L7T044	Acetyltransferase	NA
UHGV-0010769_51	eggNOG-mapper	1173745.A0A059TAF9_9CAUD	NA	NA
UHGV-0010769_51	Structural annotation	PF16092, MF_02210, NF007025, COG0456	NA	NA
UHGV-0010769_52	PHROG	phrog_314	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0010769_52	UniRef90	UniRef90_A0A6B4AIJ6	Endonuclease	NA
UHGV-0010769_52	eggNOG-mapper	402777.KB235904_gene3578	GIY-YIG catalytic domain	NA
UHGV-0010769_52	PADLOC	HEase_00030	homing endonuclease	RM
UHGV-0010769_52	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-0010769_52	Pfam	PF07460	NUMOD3 motif	NUMOD3
UHGV-0010769_52	NCBIFam	TIGR01453.1	group I intron endonuclease	NA
UHGV-0010769_52	COG	COG3860	NA	NA
UHGV-0010769_53	PHROG	phrog_11233	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0010769_53	UniRef90	UniRef90_H6LCD1	Bacteriophage-like protein	NA
UHGV-0010769_53	eggNOG-mapper	1298920.KI911353_gene2714	DnaD domain protein	NA
UHGV-0010769_53	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0010769_53	Structural annotation	PF13463, TIGR01889, COG1846	NA	NA
UHGV-0010769_54	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0010769_54	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0010769_54	UniRef90	UniRef90_A0A6I3SBY6	DNA replication protein	NA
UHGV-0010769_54	eggNOG-mapper	370438.PTH_2166	IstB-like ATP binding protein	NA
UHGV-0010769_54	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0010769_54	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0010769_54	Structural annotation	PF01695, MF_01919, NF005992, COG1484	NA	NA
UHGV-0010769_55	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0010769_55	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0010769_55	UniRef90	UniRef90_UPI001BE555F2	AAA family ATPase	NA
UHGV-0010769_55	eggNOG-mapper	720555.BATR1942_09765	AAA domain	NA
UHGV-0010769_55	Pfam	PF13481	AAA domain	AAA_25
UHGV-0010769_55	COG	COG0305	Replicative DNA helicase	NA
UHGV-0010769_55	Structural annotation	PF03796, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0010769_60	KOfam	K17680	PEO1; twinkle protein [EC:5.6.2.3]	NA
UHGV-0010769_60	PHROG	phrog_47	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0010769_60	UniRef90	UniRef90_UPI001CCA0547	toprim domain-containing protein	NA
UHGV-0010769_60	eggNOG-mapper	720555.BATR1942_09755	Toprim-like	NA
UHGV-0010769_60	Pfam	PF13155	Toprim-like	Toprim_2
UHGV-0010769_60	COG	COG0358	DNA primase (bacterial type)	NA
UHGV-0010769_60	Structural annotation	PF01807, PF19898, MF_00974, TIGR01391, COG0358	NA	NA
UHGV-0010769_61	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0010769_64	eggNOG-mapper	370438.PTH_2160	NA	NA
UHGV-0010769_64	Structural annotation	PF08804, MF_04152	NA	NA
UHGV-0010769_65	KOfam	K07464	cas4; CRISPR-associated exonuclease Cas4 [EC:3.1.12.1]	NA
UHGV-0010769_65	PHROG	phrog_1706	CRISPR/Cas system associated	DNA, RNA and nucleotide metabolism
UHGV-0010769_65	UniRef90	UniRef90_A0A4R2RD90	PD-(D/E)XK nuclease superfamily protein	NA
UHGV-0010769_65	eggNOG-mapper	485916.Dtox_1875	NA	NA
UHGV-0010769_65	Pfam	PF12705	PD-(D/E)XK nuclease superfamily	PDDEXK_1
UHGV-0010769_65	Structural annotation	PF09810, MF_03030, TIGR00372, COG4343	NA	NA
UHGV-0010769_66	KOfam	K01159	ruvC; crossover junction endodeoxyribonuclease RuvC [EC:3.1.21.10]	NA
UHGV-0010769_66	PHROG	phrog_159	RuvC-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0010769_66	UniRef90	UniRef90_UPI000BF1637D	crossover junction endodeoxyribonuclease RuvC	NA
UHGV-0010769_66	eggNOG-mapper	720555.BATR1942_09725	Crossover junction endodeoxyribonuclease RuvC	NA
UHGV-0010769_66	Pfam	PF02075	Crossover junction endodeoxyribonuclease RuvC	RuvC
UHGV-0010769_66	COG	COG0817	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	NA
UHGV-0010769_66	Structural annotation	PF02075, MF_00034, TIGR00228, COG0817	NA	NA
UHGV-0010769_67	PHROG	phrog_38239	NA	unknown function
UHGV-0010769_67	eggNOG-mapper	411469.EUBHAL_03234	Ferredoxin thioredoxin reductase catalytic beta chain	NA
UHGV-0010769_67	Pfam	PF02943	Ferredoxin thioredoxin reductase catalytic beta chain	FeThRed_B
UHGV-0010769_68	KOfam	K04068	nrdG; anaerobic ribonucleoside-triphosphate reductase activating protein [EC:1.97.1.4]	NA
UHGV-0010769_68	PHROG	phrog_626	anaerobic ribonucleotide reductase small subunit	DNA, RNA and nucleotide metabolism
UHGV-0010769_68	UniRef90	UniRef90_A0A845KYN2	Anaerobic ribonucleoside-triphosphate reductase-activating protein	NA
UHGV-0010769_68	eggNOG-mapper	883109.HMPREF0380_00093	Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine	NA
UHGV-0010769_68	Pfam	PF13353	4Fe-4S single cluster domain	Fer4_12
UHGV-0010769_68	COG	COG0602	Organic radical activating enzyme NrdG/QueE	NA
UHGV-0010769_68	Structural annotation	PF13353, MF_00917, TIGR02491, COG0602	NA	NA
UHGV-0010769_72	KOfam	K21636	nrdD; ribonucleoside-triphosphate reductase (formate) [EC:1.1.98.6]	NA
UHGV-0010769_72	PHROG	phrog_487	NrdD-like anaerobic ribonucleotide reductase large subunit	moron, auxiliary metabolic gene and host takeover
UHGV-0010769_72	UniRef90	UniRef90_UPI00165D914B	anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-0010769_72	eggNOG-mapper	485916.Dtox_3904	Anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-0010769_72	Pfam	PF13597	Anaerobic ribonucleoside-triphosphate reductase	NRDD
UHGV-0010769_72	NCBIFam	NF006127.0	anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-0010769_72	COG	COG1328	Anaerobic ribonucleoside-triphosphate reductase	NA
UHGV-0010769_72	Structural annotation	PF13597, MF_04027, TIGR02827, COG1328	NA	NA
UHGV-0010769_76	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0010769_76	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0010769_76	UniRef90	UniRef90_UPI001884472A	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA
UHGV-0010769_76	eggNOG-mapper	195103.CPF_1722	dUTPase	NA
UHGV-0010769_76	Pfam	PF00692	dUTPase	dUTPase
UHGV-0010769_76	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0010769_76	Structural annotation	PF00692, MF_00116, TIGR00576, COG0756	NA	NA
UHGV-0010769_77	Pfam	PF10957	Sporulation protein Cse60	Spore_Cse60
UHGV-0010769_79	eggNOG-mapper	545243.BAEV01000179_gene2426	NA	NA
UHGV-0010769_79	Pfam	PF14014	NA	DUF4230
UHGV-0010769_79	Structural annotation	PF14014	NA	NA
UHGV-0010769_80	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0010769_80	PHROG	phrog_435	endolysin	lysis
UHGV-0010769_80	UniRef90	UniRef90_UPI001956F537	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0010769_80	eggNOG-mapper	572479.Hprae_0613	PFAM Copper amine oxidase N-terminal domain	NA
UHGV-0010769_80	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0010769_80	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0010769_86	PHROG	phrog_6721	NA	unknown function
UHGV-0010769_86	UniRef90	UniRef90_A0A0L0W620	Thymidylate synthase complementing protein	NA
UHGV-0010769_86	eggNOG-mapper	1230342.CTM_10898	NA	NA
UHGV-0010769_86	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0010769	Yes	59,306 bps	34.50%	100.00%	0.9806