vOTU-042636

Overview

vOTU representative UHGV-0012048

No. of genomes 3

Genome length 37,113 bps

Completeness 100.00% (complete)

Host ER4 sp000765235

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-042636
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00077 › vGENUS-00413 › vSUBGEN-24971 › vOTU-042636
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › ER4 › ER4 sp000765235
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0012048
BioSample	SAMEA4765620
Genome length	37,113 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	58
CDS density	92.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0012048_1	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0012048_1	UniRef90	UniRef90_A0A4U9RLZ8	NA	NA
UHGV-0012048_1	eggNOG-mapper	1567010.A0A0A7RU90_9VIRU	protein disulfide oxidoreductase activity	NA
UHGV-0012048_2	PHROG	phrog_38832	NA	unknown function
UHGV-0012048_2	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-0012048_2	Structural annotation	PF10781	NA	NA
UHGV-0012048_4	UniRef90	UniRef90_UPI000EA8CBC0	NA	NA
UHGV-0012048_4	Pfam	PF04448	NA	DUF551
UHGV-0012048_4	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0012048_4	Structural annotation	NF041588	NA	NA
UHGV-0012048_6	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0012048_6	PHROG	phrog_27290	NA	unknown function
UHGV-0012048_6	UniRef90	UniRef90_UPI001BB4839F	ParB N-terminal domain-containing protein	NA
UHGV-0012048_6	eggNOG-mapper	1007096.BAGW01000033_gene1613	ParB-like nuclease domain	NA
UHGV-0012048_6	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0012048_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0012048_6	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0012048_6	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0012048_7	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0012048_7	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0012048_7	UniRef90	UniRef90_UPI001C0253FB	ParA family protein	NA
UHGV-0012048_7	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0012048_7	Pfam	PF13614	AAA domain	AAA_31
UHGV-0012048_7	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0012048_7	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0012048_8	PHROG	phrog_27610	NA	unknown function
UHGV-0012048_9	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0012048_9	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0012048_9	UniRef90	UniRef90_UPI00195856D7	AAA family ATPase	NA
UHGV-0012048_9	eggNOG-mapper	1226322.HMPREF1545_00095	DnaB-like helicase N terminal domain	NA
UHGV-0012048_9	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0012048_9	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0012048_9	COG	COG0305	Replicative DNA helicase	NA
UHGV-0012048_9	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-0012048_10	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0012048_10	UniRef90	UniRef90_UPI001EE1549C	helix-turn-helix domain-containing protein	NA
UHGV-0012048_10	eggNOG-mapper	1226322.HMPREF1545_00094	DnaD domain protein	NA
UHGV-0012048_10	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0012048_10	Structural annotation	PF02295, MF_01819, TIGR04176, COG3355	NA	NA
UHGV-0012048_12	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0012048_12	UniRef90	UniRef90_UPI001C01DF91	helix-turn-helix transcriptional regulator	NA
UHGV-0012048_12	eggNOG-mapper	1226322.HMPREF1545_00092	Helix-turn-helix XRE-family like proteins	NA
UHGV-0012048_12	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0012048_12	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0012048_12	Structural annotation	PF01381, NF040522, COG1476	NA	NA
UHGV-0012048_13	Structural annotation	PF12728, NF040990	NA	NA
UHGV-0012048_14	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0012048_14	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0012048_14	UniRef90	UniRef90_A0A1Y3SLP5	HTH cro/C1-type domain-containing protein	NA
UHGV-0012048_14	eggNOG-mapper	1410650.JHWL01000004_gene1768	Helix-turn-helix XRE-family like proteins	NA
UHGV-0012048_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0012048_14	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0012048_16	UniRef90	UniRef90_A0A845RB47	XRE family transcriptional regulator	NA
UHGV-0012048_16	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0012048_17	UniRef90	UniRef90_A0A0U5B9V3	TM2 domain-containing protein	NA
UHGV-0012048_17	eggNOG-mapper	1246448.ANAZ01000002_gene3790	TM2 domain	NA
UHGV-0012048_17	COG	COG2314	NA	NA
UHGV-0012048_18	KOfam	K14059	int; integrase	NA
UHGV-0012048_18	PHROG	phrog_1	integrase	integration and excision
UHGV-0012048_18	UniRef90	UniRef90_A0A1H8A220	Site-specific recombinase XerD	NA
UHGV-0012048_18	eggNOG-mapper	693746.OBV_01970	Phage integrase family	NA
UHGV-0012048_18	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0012048_18	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0012048_18	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0012048_18	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0012048_19	UniRef90	UniRef90_A0A8F0WD75	RNA polymerase sigma factor/Ubiquitin-like protein	NA
UHGV-0012048_19	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-0012048_21	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0012048_25	Pfam	PF08281	Sigma-70, region 4	Sigma70_r4_2
UHGV-0012048_25	Structural annotation	PF04545, MF_00674, NF009179, COG1342	NA	NA
UHGV-0012048_26	PHROG	phrog_21825	endolysin	lysis
UHGV-0012048_26	UniRef90	UniRef90_R5SN87	Peptidase C51 domain-containing protein	NA
UHGV-0012048_26	eggNOG-mapper	1007096.BAGW01000022_gene2648	CHAP domain	NA
UHGV-0012048_26	Pfam	PF05257	CHAP domain	CHAP
UHGV-0012048_26	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0012048_26	Structural annotation	TIGR02594	NA	NA
UHGV-0012048_27	PHROG	phrog_13256	NA	unknown function
UHGV-0012048_27	eggNOG-mapper	1519439.JPJG01000023_gene535	NA	NA
UHGV-0012048_29	PHROG	phrog_4105	NA	unknown function
UHGV-0012048_31	PHROG	phrog_18593	NA	unknown function
UHGV-0012048_31	UniRef90	UniRef90_A0A2A7B8Z9	Chitinase	NA
UHGV-0012048_31	eggNOG-mapper	552398.HMPREF0866_03095	NA	NA
UHGV-0012048_31	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0012048_32	PHROG	phrog_863	tail fiber assembly	tail
UHGV-0012048_32	eggNOG-mapper	742738.HMPREF9460_01382	NA	NA
UHGV-0012048_32	Pfam	PF21722	Glycine-rich domain	Gly_rich_2
UHGV-0012048_32	Structural annotation	PF13620, NF040788, COG2512	NA	NA
UHGV-0012048_33	PHROG	phrog_18725	NA	unknown function
UHGV-0012048_33	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0012048_33	Structural annotation	PF13754, COG2372	NA	NA
UHGV-0012048_34	KOfam	K01361	E3.4.21.96; lactocepin [EC:3.4.21.96]	NA
UHGV-0012048_34	PHROG	phrog_11157	NA	unknown function
UHGV-0012048_34	UniRef90	UniRef90_UPI001C10C6DC	Ig-like domain-containing protein	NA
UHGV-0012048_34	eggNOG-mapper	476272.RUMHYD_02867	NA	NA
UHGV-0012048_34	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0012048_34	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0012048_34	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0012048_34	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0012048_35	KOfam	K06882	NA	NA
UHGV-0012048_35	eggNOG-mapper	446469.Sked_04370	Chitin-binding domain 3 protein	NA
UHGV-0012048_35	Pfam	PF18370	Rhamnogalacturonan I lyases beta-sheet domain	RGI_lyase
UHGV-0012048_35	COG	COG3397	Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains	NA
UHGV-0012048_35	Structural annotation	PF16893, PF02973, COG3979	NA	NA
UHGV-0012048_36	PHROG	phrog_13879	NA	unknown function
UHGV-0012048_36	eggNOG-mapper	1235797.C816_02659	NA	NA
UHGV-0012048_36	Structural annotation	PF14594, PF06588, NF033848, COG4379, COG5156	NA	NA
UHGV-0012048_37	eggNOG-mapper	1235797.C816_02660	NA	NA
UHGV-0012048_37	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0012048_38	PHROG	phrog_23464	NA	unknown function
UHGV-0012048_38	UniRef90	UniRef90_A0A318XNK8	Phage-related minor tail protein	NA
UHGV-0012048_38	eggNOG-mapper	33035.JPJF01000023_gene3232	phage tail tape measure protein	NA
UHGV-0012048_38	COG	COG5412	Phage-related protein	NA
UHGV-0012048_38	Structural annotation	TIGR01760, COG5280	NA	NA
UHGV-0012048_39	Structural annotation	PF11836, TIGR01674	NA	NA
UHGV-0012048_40	PHROG	phrog_88	major tail protein	tail
UHGV-0012048_40	COG	COG5492	NA	NA
UHGV-0012048_40	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0012048_41	eggNOG-mapper	1203606.HMPREF1526_00974	NA	NA
UHGV-0012048_41	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0012048_41	Structural annotation	TIGR01725	NA	NA
UHGV-0012048_42	eggNOG-mapper	1203606.HMPREF1526_00975	NA	NA
UHGV-0012048_42	Structural annotation	PF05657	NA	NA
UHGV-0012048_43	PHROG	phrog_25	head closure Hc1	connector
UHGV-0012048_43	UniRef90	UniRef90_A0A845R2W2	Head-tail adaptor protein	NA
UHGV-0012048_43	eggNOG-mapper	1540257.JQMW01000004_gene414	head-tail adaptor	NA
UHGV-0012048_43	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0012048_43	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0012048_43	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0012048_43	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0012048_44	UniRef90	UniRef90_UPI0002DDE99A	head-tail connector protein	NA
UHGV-0012048_44	eggNOG-mapper	693746.OBV_20060	NA	NA
UHGV-0012048_44	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0012048_44	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0012048_45	PHROG	phrog_10	major head protein	head and packaging
UHGV-0012048_45	UniRef90	UniRef90_UPI001BB4749F	phage major capsid protein	NA
UHGV-0012048_45	eggNOG-mapper	742740.HMPREF9474_04304	Phage capsid family	NA
UHGV-0012048_45	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0012048_45	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0012048_45	Structural annotation	PF05065, PF14182, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0012048_46	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0012048_46	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0012048_46	UniRef90	UniRef90_UPI00124513AA	Clp protease ClpP	NA
UHGV-0012048_46	eggNOG-mapper	557436.Lreu_1115	Belongs to the peptidase S14 family	NA
UHGV-0012048_46	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0012048_46	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0012048_46	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0012048_47	PHROG	phrog_12	portal protein	head and packaging
UHGV-0012048_47	UniRef90	UniRef90_UPI001958B72F	phage portal protein	NA
UHGV-0012048_47	eggNOG-mapper	1007103.AFHW01000142_gene1297	Phage portal protein	NA
UHGV-0012048_47	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0012048_47	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0012048_47	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0012048_47	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0012048_49	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0012048_49	UniRef90	UniRef90_UPI0019583763	terminase large subunit	NA
UHGV-0012048_49	eggNOG-mapper	1007096.BAGW01000012_gene2374	Phage Terminase	NA
UHGV-0012048_49	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0012048_49	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0012048_49	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0012048_49	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0012048_50	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0012048_50	UniRef90	UniRef90_UPI001EDE2A13	phage terminase small subunit P27 family	NA
UHGV-0012048_50	eggNOG-mapper	1007096.BAGW01000012_gene2373	Phage terminase, small subunit	NA
UHGV-0012048_50	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0012048_50	NCBIFam	TIGR01558.1	phage terminase small subunit P27 family	NA
UHGV-0012048_50	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0012048_50	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0012048_51	PHROG	phrog_21498	NA	unknown function
UHGV-0012048_51	UniRef90	UniRef90_C7MM70	ParB-like nuclease	NA
UHGV-0012048_51	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0012048_51	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0012048_51	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0012048_51	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0012048_51	Structural annotation	PF02195, PF05869, MF_02015, TIGR04285, TIGR01712, COG1475	NA	NA
UHGV-0012048_52	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0012048_52	UniRef90	UniRef90_UPI001C022B94	HNH endonuclease	NA
UHGV-0012048_52	eggNOG-mapper	693746.OBV_19960	HNH endonuclease	NA
UHGV-0012048_52	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0012048_52	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0012048_52	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0012048_53	UniRef90	UniRef90_UPI001F309B22	cysteine-rich KTR domain-containing protein	NA
UHGV-0012048_53	eggNOG-mapper	742738.HMPREF9460_00868	Cysteine-rich KTR	NA
UHGV-0012048_53	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-0012048_53	Structural annotation	PF14205, NF041070	NA	NA
UHGV-0012048_54	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0012048_54	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-0012048_54	Structural annotation	PF11726	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0012048	Yes	37,113 bps	62.35%	100.00%	0.9806
UHGV-0032243	No	33,807 bps	62.43%	93.50%	0.9804
UHGV-0027540	No	29,615 bps	61.97%	81.11%	0.9813