vOTU-042956

Overview

vOTU representative UHGV-0031973

No. of genomes 5

Genome length 42,207 bps

Completeness 100.00% (complete)

Host ERR7745947 bin.217

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-042956
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-02809 › vGENUS-09305 › vSUBGEN-10670 › vOTU-042956
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Avilachnospira › ERR7745947 bin.217
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0031973
BioSample	SAMEA4765921
Genome length	42,207 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	74
CDS density	95.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0031973_1	Pfam	PF02915	Rubrerythrin	Rubrerythrin
UHGV-0031973_6	PHROG	phrog_13589	NA	unknown function
UHGV-0031973_6	eggNOG-mapper	411460.RUMTOR_01324	NA	NA
UHGV-0031973_7	PHROG	phrog_31538	NA	unknown function
UHGV-0031973_8	PHROG	phrog_12105	NA	unknown function
UHGV-0031973_8	eggNOG-mapper	1226322.HMPREF1545_03850	NA	NA
UHGV-0031973_9	PHROG	phrog_918	NA	unknown function
UHGV-0031973_9	UniRef90	UniRef90_UPI00195F2652	NA	NA
UHGV-0031973_9	eggNOG-mapper	1321782.HMPREF1986_00359	NA	NA
UHGV-0031973_9	Pfam	PF19791	NA	DUF6275
UHGV-0031973_9	Structural annotation	PF19791	NA	NA
UHGV-0031973_14	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0031973_14	Structural annotation	NF040910	NA	NA
UHGV-0031973_16	PHROG	phrog_14030	NA	unknown function
UHGV-0031973_16	UniRef90	UniRef90_A0A6N2W7D7	Peptidoglycan binding domain protein	NA
UHGV-0031973_16	eggNOG-mapper	742740.HMPREF9474_02332	NA	NA
UHGV-0031973_16	Pfam	PF01473	Putative cell wall binding repeat	Choline_bind_1
UHGV-0031973_17	PHROG	phrog_443	holin	lysis
UHGV-0031973_17	UniRef90	UniRef90_A0A2U2ELA1	Membrane protein	NA
UHGV-0031973_17	eggNOG-mapper	411463.EUBVEN_02210	Putative lactococcus lactis phage r1t holin	NA
UHGV-0031973_17	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0031973_17	Structural annotation	PF16945	NA	NA
UHGV-0031973_18	PHROG	phrog_15239	NA	unknown function
UHGV-0031973_19	PHROG	phrog_1357	major head protein	head and packaging
UHGV-0031973_19	UniRef90	UniRef90_UPI000B8B3F29	N4-gp56 family major capsid protein	NA
UHGV-0031973_19	eggNOG-mapper	1203606.HMPREF1526_02746	NA	NA
UHGV-0031973_19	Pfam	PF13252	NA	DUF4043
UHGV-0031973_19	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0031973_19	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0031973_20	PHROG	phrog_13908	NA	unknown function
UHGV-0031973_20	eggNOG-mapper	1410650.JHWL01000003_gene2831	NA	NA
UHGV-0031973_21	eggNOG-mapper	1408437.JNJN01000060_gene452	heme binding	NA
UHGV-0031973_21	COG	COG0503	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	NA
UHGV-0031973_22	eggNOG-mapper	1410650.JHWL01000003_gene2815	NA	NA
UHGV-0031973_23	eggNOG-mapper	397290.C810_03256	NA	NA
UHGV-0031973_25	PHROG	phrog_25888	NA	unknown function
UHGV-0031973_25	Structural annotation	PF10651, COG3470	NA	NA
UHGV-0031973_27	UniRef90	UniRef90_R5GGG7	Phage minor structural protein	NA
UHGV-0031973_27	eggNOG-mapper	1298920.KI911353_gene2679	NA	NA
UHGV-0031973_28	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-0031973_28	eggNOG-mapper	1321782.HMPREF1986_00351	NA	NA
UHGV-0031973_28	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-0031973_29	KOfam	K07584	NA	NA
UHGV-0031973_29	PHROG	phrog_4478	peptidase	other
UHGV-0031973_29	eggNOG-mapper	1449126.JQKL01000003_gene1697	Cysteine protease Prp	NA
UHGV-0031973_29	Pfam	PF04327	Cysteine protease Prp	Peptidase_Prp
UHGV-0031973_29	COG	COG2868	NA	NA
UHGV-0031973_29	Structural annotation	PF04327, NF011133, COG2868	NA	NA
UHGV-0031973_30	PHROG	phrog_156	portal protein	head and packaging
UHGV-0031973_30	UniRef90	UniRef90_A0A8D9UH10	Portal protein	NA
UHGV-0031973_30	eggNOG-mapper	748224.HMPREF9436_01396	NA	NA
UHGV-0031973_30	Structural annotation	PF16510, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0031973_31	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0031973_31	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0031973_31	UniRef90	UniRef90_R5G2T0	Terminase_3 domain-containing protein	NA
UHGV-0031973_31	eggNOG-mapper	1410650.JHWL01000003_gene2834	NA	NA
UHGV-0031973_31	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0031973_31	COG	COG1783	Phage terminase large subunit	NA
UHGV-0031973_31	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0031973_32	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0031973_32	UniRef90	UniRef90_UPI001D0950BA	helix-turn-helix domain-containing protein	NA
UHGV-0031973_32	eggNOG-mapper	411468.CLOSCI_00294	transposase activity	NA
UHGV-0031973_32	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0031973_32	Structural annotation	PF07141	NA	NA
UHGV-0031973_34	UniRef90	UniRef90_A0A7X9KZH7	Helix-turn-helix domain-containing protein	NA
UHGV-0031973_34	eggNOG-mapper	1280673.AUJJ01000020_gene1343	Nucleotidyltransferase domain	NA
UHGV-0031973_34	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0031973_34	COG	COG1669	Predicted nucleotidyltransferase MJ0435	NA
UHGV-0031973_34	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0031973_41	UniRef90	UniRef90_R5R2P7	DNA polymerase II large subunit	NA
UHGV-0031973_41	eggNOG-mapper	428127.EUBDOL_01238	NA	NA
UHGV-0031973_43	eggNOG-mapper	1410632.JHWW01000004_gene1673	NA	NA
UHGV-0031973_44	PHROG	phrog_111	DNA methyltransferase	other
UHGV-0031973_44	UniRef90	UniRef90_A0A5M8C197	Adenine methyltransferase	NA
UHGV-0031973_44	eggNOG-mapper	411468.CLOSCI_00567	DNA N-6-adenine-methyltransferase	NA
UHGV-0031973_44	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-0031973_44	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0031973_44	NCBIFam	TIGR01712.1	phage N-6-adenine-methyltransferase	NA
UHGV-0031973_44	Structural annotation	PF05869, MF_03187, TIGR01712, COG2263	NA	NA
UHGV-0031973_45	UniRef90	UniRef90_A0A3B8Y3Y5	Hydrolase_2 domain-containing protein	NA
UHGV-0031973_46	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0031973_46	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-0031973_46	Structural annotation	PF14359, COG3613	NA	NA
UHGV-0031973_49	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0031973_50	PHROG	phrog_15768	NA	unknown function
UHGV-0031973_50	UniRef90	UniRef90_G9WTJ4	NA	NA
UHGV-0031973_50	eggNOG-mapper	642492.Clole_1479	DnaD domain protein	NA
UHGV-0031973_50	Pfam	PF19808	NA	DUF6291
UHGV-0031973_50	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0031973_50	Structural annotation	PF19808	NA	NA
UHGV-0031973_52	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0031973_52	UniRef90	UniRef90_UPI001C0F5697	NA	NA
UHGV-0031973_52	eggNOG-mapper	1236514.BAKL01000051_gene3708	NA	NA
UHGV-0031973_52	Pfam	PF06356	NA	DUF1064
UHGV-0031973_52	Structural annotation	PF06356	NA	NA
UHGV-0031973_54	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0031973_54	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0031973_54	UniRef90	UniRef90_A0A1H4ERQ4	Single-stranded DNA-binding protein	NA
UHGV-0031973_54	eggNOG-mapper	1280685.AUKC01000081_gene1299	Single-strand binding protein family	NA
UHGV-0031973_54	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0031973_54	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0031973_54	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0031973_54	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0031973_54	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0031973_55	PHROG	phrog_7566	NA	unknown function
UHGV-0031973_55	eggNOG-mapper	1304866.K413DRAFT_1198	NA	NA
UHGV-0031973_56	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0031973_56	eggNOG-mapper	445972.ANACOL_00148	NA	NA
UHGV-0031973_56	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0031973_57	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0031973_57	UniRef90	UniRef90_UPI001BABF1B9	ERF family protein	NA
UHGV-0031973_57	eggNOG-mapper	929506.CbC4_1193	ERF superfamily	NA
UHGV-0031973_57	Pfam	PF04404	ERF superfamily	ERF
UHGV-0031973_57	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0031973_59	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0031973_59	UniRef90	UniRef90_UPI00188A68AB	siphovirus Gp157 family protein	NA
UHGV-0031973_59	eggNOG-mapper	1410650.JHWL01000003_gene2853	Siphovirus Gp157	NA
UHGV-0031973_59	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0031973_59	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0031973_67	UniRef90	UniRef90_A0A174QJI6	XRE family transcriptional regulator	NA
UHGV-0031973_67	eggNOG-mapper	478749.BRYFOR_07571	NA	NA
UHGV-0031973_67	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0031973_67	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0031973_68	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0031973_68	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0031973_68	UniRef90	UniRef90_A0A373CSW6	XRE family transcriptional regulator	NA
UHGV-0031973_68	eggNOG-mapper	642492.Clole_2801	Helix-turn-helix XRE-family like proteins	NA
UHGV-0031973_68	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0031973_68	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0031973_68	Structural annotation	PF01381, MF_00535, NF007257, COG1396	NA	NA
UHGV-0031973_70	UniRef90	UniRef90_R6GNZ5	DNA-binding helix-turn-helix protein	NA
UHGV-0031973_70	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0031973_70	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0031973_71	UniRef90	UniRef90_A0A1H3W3M1	KTSC domain-containing protein	NA
UHGV-0031973_71	eggNOG-mapper	251229.Chro_3064	KTSC domain	NA
UHGV-0031973_71	Pfam	PF13619	KTSC domain	KTSC
UHGV-0031973_71	Structural annotation	PF13619	NA	NA
UHGV-0031973_73	PHROG	phrog_24386	NA	unknown function
UHGV-0031973_73	UniRef90	UniRef90_A0A2K9V2Y7	Polynucleotide kinase	NA
UHGV-0031973_73	eggNOG-mapper	1235835.C814_01172	phosphatase activity	NA
UHGV-0031973_73	COG	COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	NA
UHGV-0031973_74	KOfam	K14059	int; integrase	NA
UHGV-0031973_74	PHROG	phrog_1	integrase	integration and excision
UHGV-0031973_74	UniRef90	UniRef90_A0A396MP09	Site-specific integrase	NA
UHGV-0031973_74	eggNOG-mapper	608534.GCWU000341_02323	Belongs to the 'phage' integrase family	NA
UHGV-0031973_74	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0031973_74	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0031973_74	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0031973	Yes	42,207 bps	44.58%	100.00%	0.9800
UHGV-0017326	No	42,207 bps	44.58%	100.00%	0.9796
UHGV-0025509	No	42,360 bps	44.53%	99.90%	0.9794
UHGV-0031938	No	42,260 bps	44.57%	99.90%	0.9801
UHGV-0025402	No	41,796 bps	44.67%	99.90%	0.9784