vOTU-043095

Overview

vOTU representative UHGV-0019084

No. of genomes 1

Genome length 35,137 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-043095
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-00476 › vGENUS-04160 › vSUBGEN-36750 › vOTU-043095
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0019084
BioSample	SAMEA4765932
Genome length	35,137 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	93.95%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0019084_2	PHROG	phrog_22984	NA	unknown function
UHGV-0019084_4	Structural annotation	PF04545, MF_00674, NF008895, COG1342	NA	NA
UHGV-0019084_5	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0019084_5	PHROG	phrog_435	endolysin	lysis
UHGV-0019084_5	UniRef90	UniRef90_A0A351MWN4	SPOR domain-containing protein	NA
UHGV-0019084_5	eggNOG-mapper	697281.Mahau_0053	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0019084_5	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0019084_5	Pfam	PF05036	SPOR domain	SPOR
UHGV-0019084_5	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0019084_5	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0019084_6	PHROG	phrog_1129	holin	lysis
UHGV-0019084_6	UniRef90	UniRef90_A0A8D9PDD4	Holin	NA
UHGV-0019084_6	eggNOG-mapper	1007096.BAGW01000036_gene2663	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0019084_6	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0019084_6	Structural annotation	PF06946	NA	NA
UHGV-0019084_8	PHROG	phrog_30034	NA	unknown function
UHGV-0019084_8	UniRef90	UniRef90_R6RWR8	Carbohydrate binding domain protein	NA
UHGV-0019084_8	eggNOG-mapper	411460.RUMTOR_02099	NA	NA
UHGV-0019084_8	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0019084_8	Structural annotation	PF14600	NA	NA
UHGV-0019084_9	eggNOG-mapper	1408437.JNJN01000040_gene189	NA	NA
UHGV-0019084_10	PHROG	phrog_19280	NA	unknown function
UHGV-0019084_10	eggNOG-mapper	2754.EH55_00535	NA	NA
UHGV-0019084_10	Structural annotation	PF10651, PF04862, TIGR04362, COG5513	NA	NA
UHGV-0019084_11	Structural annotation	PF17642	NA	NA
UHGV-0019084_12	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0019084_12	UniRef90	UniRef90_A0A316NPB5	Peptidase S74 domain-containing protein	NA
UHGV-0019084_12	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0019084_12	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0019084_12	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0019084_12	COG	COG4926	Phage-related protein	NA
UHGV-0019084_12	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0019084_13	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0019084_13	UniRef90	UniRef90_A0A1C6H6D2	Phage-related protein	NA
UHGV-0019084_13	eggNOG-mapper	1160721.RBI_I01575	Phage tail protein	NA
UHGV-0019084_13	COG	COG4722	Phage-related protein YomH	NA
UHGV-0019084_13	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0019084_14	PHROG	phrog_3981	tail length tape measure protein	tail
UHGV-0019084_14	UniRef90	UniRef90_UPI000C7A2D83	phage tail tape measure protein	NA
UHGV-0019084_14	eggNOG-mapper	1121334.KB911068_gene2299	Phage tail tape measure protein, TP901 family	NA
UHGV-0019084_14	COG	COG5283	Phage-related tail protein	NA
UHGV-0019084_14	Structural annotation	COG5280	NA	NA
UHGV-0019084_15	PHROG	phrog_3033	NA	unknown function
UHGV-0019084_15	eggNOG-mapper	1235799.C818_01010	NA	NA
UHGV-0019084_16	PHROG	phrog_709	NA	unknown function
UHGV-0019084_16	eggNOG-mapper	411471.SUBVAR_05858	NA	NA
UHGV-0019084_16	Structural annotation	PF11836	NA	NA
UHGV-0019084_17	PHROG	phrog_88	major tail protein	tail
UHGV-0019084_17	UniRef90	UniRef90_D1PND6	Phage major tail protein, phi13 family	NA
UHGV-0019084_17	eggNOG-mapper	411471.SUBVAR_05857	phage major tail protein, phi13 family	NA
UHGV-0019084_17	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0019084_17	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0019084_18	eggNOG-mapper	1408311.JNJM01000036_gene52	NA	NA
UHGV-0019084_18	Structural annotation	PF20765	NA	NA
UHGV-0019084_19	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0019084_19	UniRef90	UniRef90_UPI00195A86A6	HK97 gp10 family phage protein	NA
UHGV-0019084_19	eggNOG-mapper	1123298.KB904077_gene463	NA	NA
UHGV-0019084_19	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0019084_19	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0019084_20	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0019084_20	UniRef90	UniRef90_U2R2J1	Putative phage head-tail adaptor	NA
UHGV-0019084_20	eggNOG-mapper	1226322.HMPREF1545_00118	NA	NA
UHGV-0019084_20	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0019084_21	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0019084_22	PHROG	phrog_10	major head protein	head and packaging
UHGV-0019084_22	UniRef90	UniRef90_A0A2V2FJ37	Phage major capsid protein	NA
UHGV-0019084_22	eggNOG-mapper	398512.JQKC01000009_gene451	Phage capsid family	NA
UHGV-0019084_22	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0019084_22	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0019084_22	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0019084_22	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0019084_22	Structural annotation	PF05065, PF18316, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0019084_23	KOfam	K06904	NA	NA
UHGV-0019084_23	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0019084_23	UniRef90	UniRef90_A0A3D1VA27	HK97 family phage prohead protease	NA
UHGV-0019084_23	eggNOG-mapper	1232446.BAIE02000002_gene825	Phage prohead protease, HK97 family	NA
UHGV-0019084_23	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0019084_23	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0019084_23	COG	COG3740	Phage head maturation protease	NA
UHGV-0019084_23	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0019084_24	PHROG	phrog_12	portal protein	head and packaging
UHGV-0019084_24	UniRef90	UniRef90_R5ENV9	Phage portal protein	NA
UHGV-0019084_24	eggNOG-mapper	491915.Aflv_0662	Phage portal protein	NA
UHGV-0019084_24	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0019084_24	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0019084_24	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0019084_24	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0019084_25	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0019084_25	UniRef90	UniRef90_R5EM34	Phage terminase large subunit	NA
UHGV-0019084_25	eggNOG-mapper	1226322.HMPREF1545_00113	Phage Terminase	NA
UHGV-0019084_25	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0019084_25	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0019084_25	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0019084_25	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-0019084_26	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0019084_27	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0019084_27	UniRef90	UniRef90_G4L1I0	Putative terminase small subunit	NA
UHGV-0019084_27	eggNOG-mapper	693746.OBV_19990	Phage terminase, small subunit	NA
UHGV-0019084_27	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0019084_27	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0019084_28	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0019084_28	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0019084_28	UniRef90	UniRef90_G4L1H9	Methyltransferase	NA
UHGV-0019084_28	eggNOG-mapper	693746.OBV_19980	DNA methylase	NA
UHGV-0019084_28	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0019084_28	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0019084_28	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0019084_28	COG	COG0863	DNA modification methylase	NA
UHGV-0019084_28	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0019084_29	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0019084_29	UniRef90	UniRef90_A0A316P1K8	HNH endonuclease	NA
UHGV-0019084_29	eggNOG-mapper	755731.Clo1100_0542	HNH nucleases	NA
UHGV-0019084_29	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0019084_30	UniRef90	UniRef90_A0A844E741	Conjugal transfer protein	NA
UHGV-0019084_30	eggNOG-mapper	478749.BRYFOR_06541	Cysteine-rich KTR	NA
UHGV-0019084_30	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-0019084_30	Structural annotation	PF14205	NA	NA
UHGV-0019084_31	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0019084_31	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-0019084_31	Structural annotation	PF11726	NA	NA
UHGV-0019084_35	Pfam	PF04448	NA	DUF551
UHGV-0019084_35	COG	COG5581	Cyclic di-GMP-binding flagellar brake protein FlgZ/YcgR, contains PilZNR(YcgR) and PilZ domains	NA
UHGV-0019084_35	Structural annotation	NF041588	NA	NA
UHGV-0019084_38	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0019084_38	PHROG	phrog_27290	NA	unknown function
UHGV-0019084_38	UniRef90	UniRef90_UPI001C029D7C	ParB N-terminal domain-containing protein	NA
UHGV-0019084_38	eggNOG-mapper	742738.HMPREF9460_00856	ParB-like nuclease domain	NA
UHGV-0019084_38	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0019084_38	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0019084_38	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0019084_40	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0019084_40	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0019084_40	UniRef90	UniRef90_UPI000318E277	ParA family protein	NA
UHGV-0019084_40	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0019084_40	Pfam	PF13614	AAA domain	AAA_31
UHGV-0019084_40	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0019084_40	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0019084_41	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0019084_41	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0019084_41	UniRef90	UniRef90_A0A1Y3RP11	DNA helicase	NA
UHGV-0019084_41	eggNOG-mapper	1007096.BAGW01000033_gene1616	DnaB-like helicase N terminal domain	NA
UHGV-0019084_41	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0019084_41	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0019084_41	COG	COG0305	Replicative DNA helicase	NA
UHGV-0019084_41	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-0019084_42	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0019084_42	UniRef90	UniRef90_UPI00103046FE	helix-turn-helix domain-containing protein	NA
UHGV-0019084_42	eggNOG-mapper	742738.HMPREF9460_00851	Helix-turn-helix domain	NA
UHGV-0019084_42	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0019084_42	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0019084_42	Structural annotation	PF04182, NF040939, COG3355	NA	NA
UHGV-0019084_45	Structural annotation	PF13560, MF_00535, NF041951, COG3655	NA	NA
UHGV-0019084_46	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0019084_46	UniRef90	UniRef90_A0A1Y4UUM6	DNA-binding protein	NA
UHGV-0019084_46	eggNOG-mapper	742738.HMPREF9460_00847	Helix-turn-helix XRE-family like proteins	NA
UHGV-0019084_46	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0019084_46	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0019084_46	Structural annotation	PF01381, MF_00535, NF040522, COG1476	NA	NA
UHGV-0019084_47	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0019084_47	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0019084_47	UniRef90	UniRef90_A0A352DNS0	XRE family transcriptional regulator	NA
UHGV-0019084_47	eggNOG-mapper	1206744.BAGL01000002_gene4127	Cupin domain	NA
UHGV-0019084_47	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019084_47	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0019084_47	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0019084_48	UniRef90	UniRef90_UPI001E54DE4F	helix-turn-helix domain-containing protein	NA
UHGV-0019084_48	eggNOG-mapper	1226322.HMPREF1545_00148	Transcriptional	NA
UHGV-0019084_48	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0019084_48	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0019084_49	PHROG	phrog_8043	NA	unknown function
UHGV-0019084_49	UniRef90	UniRef90_A0A374JQK3	HIRAN domain-containing protein	NA
UHGV-0019084_49	eggNOG-mapper	411471.SUBVAR_05817	NA	NA
UHGV-0019084_49	Pfam	PF08797	HIRAN domain	HIRAN
UHGV-0019084_49	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0019084_50	UniRef90	UniRef90_A0A8D9UHA6	Helix-turn-helix XRE-family like protein	NA
UHGV-0019084_50	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019084_50	Structural annotation	PF12844, MF_00535, TIGR03070, COG1396	NA	NA
UHGV-0019084_51	KOfam	K14059	int; integrase	NA
UHGV-0019084_51	PHROG	phrog_1	integrase	integration and excision
UHGV-0019084_51	UniRef90	UniRef90_A0A174HFN7	Site-specific tyrosine recombinase XerC	NA
UHGV-0019084_51	eggNOG-mapper	742738.HMPREF9460_01344	Phage integrase family	NA
UHGV-0019084_51	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0019084_51	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0019084_51	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0019084_52	UniRef90	UniRef90_A0A843GWV6	Rubrerythrin domain-containing protein	NA
UHGV-0019084_53	Structural annotation	PF18573, NF033147	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0019084	Yes	35,137 bps	60.49%	100.00%	0.9804