vOTU-043156

Overview

vOTU representative UHGV-0019848

No. of genomes 5

Genome length 35,773 bps

Completeness 100.00% (complete)

Host UBA4636 sp900770945

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-043156
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 › vSUBFAM-03089 › vGENUS-04230 › vSUBGEN-27374 › vOTU-043156
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › Borkfalkiaceae › UBA4636 › UBA4636 sp900770945
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019848
BioSample	SAMEA4765940
Genome length	35,773 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	57
CDS density	92.81%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0019848_1	KOfam	K14059	int; integrase	NA
UHGV-0019848_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0019848_1	UniRef90	UniRef90_A0A353EXX9	Tyr recombinase domain-containing protein	NA
UHGV-0019848_1	eggNOG-mapper	428127.EUBDOL_01497	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0019848_1	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0019848_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0019848_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0019848_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0019848_2	UniRef90	UniRef90_A0A354UMM3	HTH cro/C1-type domain-containing protein	NA
UHGV-0019848_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019848_2	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-0019848_2	Structural annotation	PF01381, NF040507, COG3655	NA	NA
UHGV-0019848_7	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0019848_7	UniRef90	UniRef90_R7FZN6	Putative helix-turn-helix protein	NA
UHGV-0019848_7	eggNOG-mapper	33035.JPJF01000055_gene1671	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0019848_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019848_7	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0019848_7	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0019848_8	PHROG	phrog_31564	NA	unknown function
UHGV-0019848_10	UniRef90	UniRef90_UPI001CA72E8D	helix-turn-helix domain-containing protein	NA
UHGV-0019848_10	eggNOG-mapper	1219035.NT2_09_00840	sequence-specific DNA binding	NA
UHGV-0019848_10	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0019848_10	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0019848_10	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0019848_14	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0019848_14	UniRef90	UniRef90_UPI0005BD945E	siphovirus Gp157 family protein	NA
UHGV-0019848_14	eggNOG-mapper	40522.A8ASN2_BPA50	Siphovirus Gp157	NA
UHGV-0019848_14	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0019848_14	Structural annotation	PF05565, NF002139	NA	NA
UHGV-0019848_15	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0019848_15	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0019848_15	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0019848_15	Structural annotation	PF04098, TIGR00607, COG5055	NA	NA
UHGV-0019848_16	PHROG	phrog_398	NA	unknown function
UHGV-0019848_16	UniRef90	UniRef90_UPI00137B6F1E	putative HNHc nuclease	NA
UHGV-0019848_16	eggNOG-mapper	1485543.JMME01000021_gene802	Putative HNHc nuclease	NA
UHGV-0019848_16	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0019848_16	Structural annotation	PF16784	NA	NA
UHGV-0019848_17	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0019848_17	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0019848_17	UniRef90	UniRef90_A0A3D5ZRJ4	Single-stranded DNA-binding protein	NA
UHGV-0019848_17	eggNOG-mapper	1042163.BRLA_c031440	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0019848_17	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0019848_17	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0019848_17	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0019848_17	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0019848_17	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0019848_18	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0019848_18	UniRef90	UniRef90_A0A316RKJ7	NA	NA
UHGV-0019848_18	eggNOG-mapper	742767.HMPREF9456_03267	NA	NA
UHGV-0019848_18	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0019848_18	Structural annotation	PF14297	NA	NA
UHGV-0019848_19	PHROG	phrog_9804	NA	unknown function
UHGV-0019848_19	UniRef90	UniRef90_UPI001966DA72	replicative helicase loader/inhibitor	NA
UHGV-0019848_19	eggNOG-mapper	903814.ELI_3550	Loader and inhibitor of phage G40P	NA
UHGV-0019848_19	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0019848_19	Structural annotation	PF11417	NA	NA
UHGV-0019848_22	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0019848_22	eggNOG-mapper	658655.HMPREF0988_00884	NA	NA
UHGV-0019848_22	AcrCatalog	cluster_47493	NA	NA
UHGV-0019848_22	Structural annotation	PF00145, MF_00341, COG0270	NA	NA
UHGV-0019848_24	Structural annotation	PF02888, MF_01506, NF009256, COG3461	NA	NA
UHGV-0019848_25	PHROG	phrog_3136	NA	unknown function
UHGV-0019848_25	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0019848_25	eggNOG-mapper	1235793.C809_02645	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0019848_25	Pfam	PF04266	ASCH domain	ASCH
UHGV-0019848_25	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0019848_25	Structural annotation	PF12961, NF008917, COG4933	NA	NA
UHGV-0019848_26	PHROG	phrog_1374	NA	unknown function
UHGV-0019848_26	UniRef90	UniRef90_A0A8F3EDV3	Membrane protein	NA
UHGV-0019848_26	eggNOG-mapper	445972.ANACOL_03351	NA	NA
UHGV-0019848_26	Pfam	PF10269	Transmembrane Fragile-X-F protein	Tmemb_185A
UHGV-0019848_27	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0019848_27	UniRef90	UniRef90_R6E548	Prophage pi1 protein 29	NA
UHGV-0019848_27	eggNOG-mapper	1123263.AUKY01000096_gene1821	NA	NA
UHGV-0019848_34	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0019848_34	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0019848_34	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0019848_34	Structural annotation	PF06530, PF21662, NF007224, COG1595	NA	NA
UHGV-0019848_35	PHROG	phrog_4728	head morphogenesis	head and packaging
UHGV-0019848_37	Structural annotation	PF02796, NF040785	NA	NA
UHGV-0019848_38	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0019848_38	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0019848_38	UniRef90	UniRef90_A0A3C1A8K4	PBSX family phage terminase large subunit	NA
UHGV-0019848_38	eggNOG-mapper	476272.RUMHYD_01756	NA	NA
UHGV-0019848_38	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0019848_38	COG	COG1783	Phage terminase large subunit	NA
UHGV-0019848_38	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0019848_39	PHROG	phrog_533	portal protein	head and packaging
UHGV-0019848_39	Structural annotation	PF05133, MF_04120, TIGR01542, COG3567	NA	NA
UHGV-0019848_40	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0019848_40	UniRef90	UniRef90_A0A2Z4GUI4	Minor capsid protein 2	NA
UHGV-0019848_40	eggNOG-mapper	1395587.P364_0122075	Phage minor capsid protein 2	NA
UHGV-0019848_40	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0019848_40	COG	COG2369	NA	NA
UHGV-0019848_42	UniRef90	UniRef90_A0A2Z4GUC0	Chitobiase/beta-hexosaminidase	NA
UHGV-0019848_42	eggNOG-mapper	1123257.AUFV01000010_gene3349	amine dehydrogenase activity	NA
UHGV-0019848_42	Pfam	PF13290	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
UHGV-0019848_42	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0019848_42	Structural annotation	PF05065, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0019848_44	Structural annotation	PF07405, TIGR01563	NA	NA
UHGV-0019848_45	UniRef90	UniRef90_A0A2Z4GU91	Minor capsid protein	NA
UHGV-0019848_46	Structural annotation	PF09393, PF05561, TIGR02126, COG5437	NA	NA
UHGV-0019848_48	Structural annotation	PF09097, TIGR02126	NA	NA
UHGV-0019848_49	PHROG	phrog_6717	NA	unknown function
UHGV-0019848_49	UniRef90	UniRef90_A0A2Z4GUB1	Crystallin beta/gamma motif-containing protein	NA
UHGV-0019848_49	eggNOG-mapper	1163745.HCD_00970	NA	NA
UHGV-0019848_49	Pfam	PF18809	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease1	PBECR1
UHGV-0019848_49	Structural annotation	PF18809	NA	NA
UHGV-0019848_51	Structural annotation	PF06013, MF_00683, NF003844, COG4842	NA	NA
UHGV-0019848_52	Pfam	PF13306	BspA type Leucine rich repeat region (6 copies)	LRR_5
UHGV-0019848_52	Structural annotation	PF10651	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0019848	Yes	35,773 bps	45.20%	100.00%	0.9669
UHGV-0034321	No	35,773 bps	45.20%	100.00%	0.9653
UHGV-0017134	No	34,818 bps	45.09%	97.76%	0.9635
UHGV-0022960	No	31,929 bps	45.73%	89.66%	0.9641
UHGV-0018860	No	21,855 bps	46.23%	61.33%	0.9665