vOTU-043170

Overview

vOTU representative UHGV-0019931

No. of genomes 5

Genome length 38,909 bps

Completeness 100.00% (complete)

Host Dorea formicigenerans

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-043170
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00321 › vGENUS-00985 › vSUBGEN-23081 › vOTU-043170
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Dorea › Dorea formicigenerans
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019931
BioSample	NA
Genome length	38,909 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	66
CDS density	92.87%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0019931_1	UniRef90	UniRef90_A0A374JR06	DNA-binding protein	NA
UHGV-0019931_1	eggNOG-mapper	1226325.HMPREF1548_06746	NA	NA
UHGV-0019931_3	PHROG	phrog_6996	NA	unknown function
UHGV-0019931_4	PHROG	phrog_4392	NA	unknown function
UHGV-0019931_4	UniRef90	UniRef90_UPI000E489044	membrane lipoprotein lipid attachment site-containing protein	NA
UHGV-0019931_5	PHROG	phrog_36464	NA	unknown function
UHGV-0019931_5	eggNOG-mapper	411461.DORFOR_01136	NA	NA
UHGV-0019931_5	Structural annotation	PF09035	NA	NA
UHGV-0019931_7	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0019931_7	eggNOG-mapper	411461.DORFOR_01138	NA	NA
UHGV-0019931_7	Structural annotation	PF01446	NA	NA
UHGV-0019931_9	PHROG	phrog_531	Rnase H	DNA, RNA and nucleotide metabolism
UHGV-0019931_9	UniRef90	UniRef90_A0A1M6MV17	Ribonuclease HI	NA
UHGV-0019931_9	eggNOG-mapper	411461.DORFOR_01140	RNA-DNA hybrid ribonuclease activity	NA
UHGV-0019931_9	COG	COG0328	Ribonuclease HI	NA
UHGV-0019931_9	Structural annotation	PF00075, MF_00042, NF001236, COG0328	NA	NA
UHGV-0019931_10	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0019931_10	PHROG	phrog_5696	NA	unknown function
UHGV-0019931_10	UniRef90	UniRef90_A0A1C5WE14	Type I restriction-modification system methyltransferase subunit	NA
UHGV-0019931_10	eggNOG-mapper	500632.CLONEX_03432	N-6 DNA Methylase	NA
UHGV-0019931_10	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0019931_10	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0019931_10	Structural annotation	COG0286	NA	NA
UHGV-0019931_11	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0019931_11	PHROG	phrog_1	integrase	integration and excision
UHGV-0019931_11	UniRef90	UniRef90_UPI00156E0BE9	tyrosine-type recombinase/integrase	NA
UHGV-0019931_11	eggNOG-mapper	471870.BACINT_03996	Belongs to the 'phage' integrase family	NA
UHGV-0019931_11	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0019931_11	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0019931_11	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0019931_11	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0019931_13	PHROG	phrog_954	DNA methyltransferase	other
UHGV-0019931_13	UniRef90	UniRef90_UPI0004115370	methyltransferase	NA
UHGV-0019931_13	eggNOG-mapper	411461.DORFOR_01143	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	NA
UHGV-0019931_13	PADLOC	MTase_II_00074	Type II methyltransferase	RM
UHGV-0019931_13	Pfam	PF08241	Methyltransferase domain	Methyltransf_11
UHGV-0019931_13	COG	COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	NA
UHGV-0019931_13	Structural annotation	PF05148, MF_03044, NF033398, COG1041	NA	NA
UHGV-0019931_14	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0019931_14	PHROG	phrog_6218	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0019931_14	UniRef90	UniRef90_B0G4F7	ParB-like protein	NA
UHGV-0019931_14	eggNOG-mapper	411461.DORFOR_01144	Belongs to the ParB family	NA
UHGV-0019931_14	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0019931_14	NCBIFam	TIGR00180.1	ParB/RepB/Spo0J family partition protein	NA
UHGV-0019931_14	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0019931_14	Structural annotation	PF02195, PF18579, MF_02015, TIGR00180, COG1475	NA	NA
UHGV-0019931_15	PHROG	phrog_7566	NA	unknown function
UHGV-0019931_15	eggNOG-mapper	411461.DORFOR_01145	NA	NA
UHGV-0019931_16	Structural annotation	PF08169, MF_01549, TIGR00405	NA	NA
UHGV-0019931_17	PHROG	phrog_24386	NA	unknown function
UHGV-0019931_17	eggNOG-mapper	411461.DORFOR_01147	COG NOG28949 non supervised orthologous group	NA
UHGV-0019931_17	COG	COG0241	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	NA
UHGV-0019931_17	Structural annotation	TIGR01689, COG0241	NA	NA
UHGV-0019931_18	PHROG	phrog_31991	NA	unknown function
UHGV-0019931_19	PHROG	phrog_38110	NA	unknown function
UHGV-0019931_20	UniRef90	UniRef90_A0A8B3AJ48	AsnC family protein	NA
UHGV-0019931_20	eggNOG-mapper	97139.C824_05982	NA	NA
UHGV-0019931_20	Structural annotation	PF00196, TIGR04381, COG2771	NA	NA
UHGV-0019931_21	Structural annotation	PF09297, MF_00327	NA	NA
UHGV-0019931_26	PHROG	phrog_38560	NA	unknown function
UHGV-0019931_26	eggNOG-mapper	610130.Closa_0723	NA	NA
UHGV-0019931_27	PHROG	phrog_33451	NA	unknown function
UHGV-0019931_27	UniRef90	UniRef90_A0A414QEQ0	NA	NA
UHGV-0019931_27	eggNOG-mapper	411461.DORFOR_01155	NA	NA
UHGV-0019931_27	Pfam	PF04448	NA	DUF551
UHGV-0019931_27	Structural annotation	PF04448	NA	NA
UHGV-0019931_28	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0019931_28	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0019931_28	UniRef90	UniRef90_UPI0015711440	type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0019931_28	eggNOG-mapper	411461.DORFOR_01157	NA	NA
UHGV-0019931_28	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0019931_28	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0019931_28	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0019931_30	PHROG	phrog_8684	NA	unknown function
UHGV-0019931_30	UniRef90	UniRef90_UPI000677CD2A	YopX family protein	NA
UHGV-0019931_30	eggNOG-mapper	457412.RSAG_01162	YopX protein	NA
UHGV-0019931_30	Pfam	PF09643	YopX protein	YopX
UHGV-0019931_30	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0019931_30	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0019931_32	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0019931_32	UniRef90	UniRef90_UPI00148AE65B	NA	NA
UHGV-0019931_32	eggNOG-mapper	568816.Acin_1354	sigma factor activity	NA
UHGV-0019931_32	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0019931_32	Structural annotation	PF07374, MF_00674, NF007227, COG1342	NA	NA
UHGV-0019931_34	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0019931_34	UniRef90	UniRef90_A0A415MTD9	HNH endonuclease	NA
UHGV-0019931_34	eggNOG-mapper	768710.DesyoDRAFT_1275	HNH nucleases	NA
UHGV-0019931_34	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0019931_34	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0019931_36	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0019931_36	UniRef90	UniRef90_UPI00156D89BA	P27 family phage terminase small subunit	NA
UHGV-0019931_36	eggNOG-mapper	610130.Closa_0740	NA	NA
UHGV-0019931_36	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0019931_36	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0019931_37	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0019931_37	UniRef90	UniRef90_A0A415MTC4	Terminase large subunit	NA
UHGV-0019931_37	eggNOG-mapper	1211817.CCAT010000053_gene2129	Phage Terminase	NA
UHGV-0019931_37	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0019931_37	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0019931_37	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0019931_37	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0019931_38	PHROG	phrog_12	portal protein	head and packaging
UHGV-0019931_38	UniRef90	UniRef90_A0A415MTC5	Phage portal protein	NA
UHGV-0019931_38	eggNOG-mapper	349161.Dred_2606	Phage portal protein, HK97 family	NA
UHGV-0019931_38	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0019931_38	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0019931_38	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0019931_39	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0019931_39	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0019931_39	UniRef90	UniRef90_A0A415MTD8	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0019931_39	eggNOG-mapper	1235792.C808_00085	Clp protease	NA
UHGV-0019931_39	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0019931_39	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0019931_39	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0019931_40	PHROG	phrog_10	major head protein	head and packaging
UHGV-0019931_40	UniRef90	UniRef90_A0A415MTA6	Phage major capsid protein	NA
UHGV-0019931_40	eggNOG-mapper	1384484.AEQU_1180	Phage capsid family	NA
UHGV-0019931_40	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0019931_40	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0019931_40	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0019931_40	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0019931_42	PHROG	phrog_5635	head-tail adaptor	connector
UHGV-0019931_42	eggNOG-mapper	1384484.AEQU_1178	NA	NA
UHGV-0019931_42	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0019931_42	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0019931_43	Structural annotation	PF05657, COG3167	NA	NA
UHGV-0019931_44	PHROG	phrog_5509	neck protein	connector
UHGV-0019931_44	UniRef90	UniRef90_W0FMR6	Gp9 protein	NA
UHGV-0019931_44	eggNOG-mapper	1450694.BTS2_0537	NA	NA
UHGV-0019931_44	Structural annotation	TIGR01725	NA	NA
UHGV-0019931_45	UniRef90	UniRef90_UPI00156FB996	phage tail protein	NA
UHGV-0019931_45	eggNOG-mapper	1384484.AEQU_1175	NA	NA
UHGV-0019931_45	Structural annotation	PF04630, TIGR01603, COG5437	NA	NA
UHGV-0019931_46	PHROG	phrog_3281	endonuclease VII	DNA, RNA and nucleotide metabolism
UHGV-0019931_46	UniRef90	UniRef90_UPI00040253E3	SAP domain-containing protein	NA
UHGV-0019931_46	Pfam	PF02037	SAP domain	SAP
UHGV-0019931_46	Structural annotation	PF21169	NA	NA
UHGV-0019931_49	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0019931_49	UniRef90	UniRef90_A0A415MTD4	Phage tail tape measure protein	NA
UHGV-0019931_49	eggNOG-mapper	1336234.JAGN01000004_gene517	Phage-related minor tail protein	NA
UHGV-0019931_49	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0019931_49	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0019931_49	COG	COG5283	Phage-related tail protein	NA
UHGV-0019931_49	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0019931_50	UniRef90	UniRef90_A0A415MTE8	Phage tail protein	NA
UHGV-0019931_50	eggNOG-mapper	411461.DORFOR_01176	NA	NA
UHGV-0019931_50	Structural annotation	PF16774, TIGR01633, COG4722	NA	NA
UHGV-0019931_51	PHROG	phrog_538	minor tail protein	tail
UHGV-0019931_51	UniRef90	UniRef90_UPI001E2C8064	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0019931_51	eggNOG-mapper	411461.DORFOR_01177	NA	NA
UHGV-0019931_51	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0019931_51	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0019931_52	PHROG	phrog_13141	NA	unknown function
UHGV-0019931_52	UniRef90	UniRef90_UPI00156D68EE	H-type lectin domain-containing protein	NA
UHGV-0019931_52	eggNOG-mapper	411461.DORFOR_01178	NA	NA
UHGV-0019931_52	Structural annotation	PF20747	NA	NA
UHGV-0019931_53	PHROG	phrog_19111	NA	unknown function
UHGV-0019931_53	eggNOG-mapper	756499.Desde_3162	nuclear chromosome segregation	NA
UHGV-0019931_53	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0019931_54	Structural annotation	PF16323	NA	NA
UHGV-0019931_56	PHROG	phrog_17147	NA	unknown function
UHGV-0019931_56	eggNOG-mapper	657322.FPR_27150	NA	NA
UHGV-0019931_57	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0019931_57	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0019931_57	UniRef90	UniRef90_D4J8M1	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0019931_57	eggNOG-mapper	657322.FPR_27160	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0019931_57	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0019931_57	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0019931_57	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-0019931_59	PHROG	phrog_28526	NA	unknown function
UHGV-0019931_59	UniRef90	UniRef90_A0A415D4T1	NA	NA
UHGV-0019931_59	eggNOG-mapper	411462.DORLON_00769	NA	NA
UHGV-0019931_60	PHROG	phrog_4105	NA	unknown function
UHGV-0019931_60	eggNOG-mapper	537013.CLOSTMETH_01753	NA	NA
UHGV-0019931_61	PHROG	phrog_443	holin	lysis
UHGV-0019931_61	UniRef90	UniRef90_UPI001570A68C	holin	NA
UHGV-0019931_61	eggNOG-mapper	742733.HMPREF9469_01797	Putative lactococcus lactis phage r1t holin	NA
UHGV-0019931_61	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0019931_61	Structural annotation	PF16945	NA	NA
UHGV-0019931_62	PHROG	phrog_2742	endolysin	lysis
UHGV-0019931_62	UniRef90	UniRef90_A0A415H551	MurNAc-LAA domain-containing protein	NA
UHGV-0019931_62	eggNOG-mapper	411462.DORLON_00764	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0019931_62	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0019931_62	Pfam	PF07538	Clostridial hydrophobic W	ChW
UHGV-0019931_62	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0019931_62	Structural annotation	PF01520, TIGR02883, COG5492, COG0860	NA	NA
UHGV-0019931_63	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0019931_63	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0019931_63	UniRef90	UniRef90_B0G4K1	DNA-binding helix-turn-helix protein	NA
UHGV-0019931_63	eggNOG-mapper	411461.DORFOR_01188	transcriptional regulator, XRE family	NA
UHGV-0019931_63	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0019931_63	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0019931_63	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0019931_64	KOfam	K14059	int; integrase	NA
UHGV-0019931_64	PHROG	phrog_1	integrase	integration and excision
UHGV-0019931_64	UniRef90	UniRef90_B0G4D9	Site-specific recombinase, phage integrase family	NA
UHGV-0019931_64	eggNOG-mapper	411461.DORFOR_01126	Phage integrase family	NA
UHGV-0019931_64	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0019931_64	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0019931_64	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0019931_64	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0019931_65	Pfam	PF08797	HIRAN domain	HIRAN
UHGV-0019931_66	UniRef90	UniRef90_A0A415MTA4	XRE family transcriptional regulator	NA
UHGV-0019931_66	eggNOG-mapper	1226325.HMPREF1548_06747	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0019931_66	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0019931	Yes	38,909 bps	42.08%	100.00%	0.9807
UHGV-0030725	No	37,269 bps	42.11%	99.90%	0.9816
UHGV-0020474	No	36,987 bps	42.16%	99.90%	0.9818
UHGV-0030790	No	36,154 bps	42.04%	99.90%	0.9819
UHGV-0014008	No	34,820 bps	42.06%	99.90%	0.9804