vOTU-043195

Overview

vOTU representative UHGV-0020123

No. of genomes 8

Genome length 39,487 bps

Completeness 100.00% (complete)

Host CAG-83 sp900555735

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-043195
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00486 › vGENUS-05687 › vSUBGEN-16708 › vOTU-043195
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83 › CAG-83 sp900555735
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020123
BioSample	NA
Genome length	39,487 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	51
CDS density	93.01%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0020123_1	eggNOG-mapper	1408437.JNJN01000002_gene1389	NA	NA
UHGV-0020123_2	PHROG	phrog_3287	virion structural protein	head and packaging
UHGV-0020123_2	eggNOG-mapper	693746.OBV_23870	NA	NA
UHGV-0020123_2	Structural annotation	PF11134, MF_01282, TIGR03300, COG5276	NA	NA
UHGV-0020123_3	eggNOG-mapper	693746.OBV_23880	NA	NA
UHGV-0020123_3	Structural annotation	PF20387	NA	NA
UHGV-0020123_4	PHROG	phrog_371	major head protein	head and packaging
UHGV-0020123_4	UniRef90	UniRef90_R6TFU9	Mu-like_gpT domain-containing protein	NA
UHGV-0020123_4	eggNOG-mapper	693746.OBV_23890	NA	NA
UHGV-0020123_4	Pfam	PF10124	Mu-like prophage major head subunit gpT	Mu-like_gpT
UHGV-0020123_4	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0020123_5	PHROG	phrog_24113	NA	unknown function
UHGV-0020123_5	eggNOG-mapper	1226322.HMPREF1545_03847	NA	NA
UHGV-0020123_5	Structural annotation	PF11133, COG5471	NA	NA
UHGV-0020123_6	PHROG	phrog_35275	NA	unknown function
UHGV-0020123_6	eggNOG-mapper	693746.OBV_23910	NA	NA
UHGV-0020123_8	Structural annotation	NF007241	NA	NA
UHGV-0020123_9	PHROG	phrog_156	portal protein	head and packaging
UHGV-0020123_9	eggNOG-mapper	693746.OBV_23930	NA	NA
UHGV-0020123_9	Structural annotation	PF12236, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0020123_10	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0020123_10	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0020123_10	UniRef90	UniRef90_G4KPV4	Terminase small subunit family protein	NA
UHGV-0020123_10	eggNOG-mapper	693746.OBV_23940	DNA packaging	NA
UHGV-0020123_10	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0020123_10	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0020123_10	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0020123_11	eggNOG-mapper	1226322.HMPREF1545_00288	NA	NA
UHGV-0020123_12	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0020123_12	eggNOG-mapper	1226322.HMPREF1545_03841	NA	NA
UHGV-0020123_12	Structural annotation	PF01446, NF041486	NA	NA
UHGV-0020123_14	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0020123_14	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0020123_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0020123_15	UniRef90	UniRef90_A0A174XWS3	Bacterial regulatory proteins, luxR family	NA
UHGV-0020123_15	eggNOG-mapper	485916.Dtox_2202	Plasmid pRiA4b ORF-3-like protein	NA
UHGV-0020123_15	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0020123_15	Structural annotation	PF00196, NF040595, COG2771	NA	NA
UHGV-0020123_16	Structural annotation	NF040595	NA	NA
UHGV-0020123_18	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0020123_18	PHROG	phrog_435	endolysin	lysis
UHGV-0020123_18	UniRef90	UniRef90_R6GV68	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020123_18	eggNOG-mapper	428125.CLOLEP_01588	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020123_18	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0020123_18	Pfam	PF05036	SPOR domain	SPOR
UHGV-0020123_18	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020123_18	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0020123_19	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0020123_19	eggNOG-mapper	397290.C810_05229	NA	NA
UHGV-0020123_20	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0020123_20	UniRef90	UniRef90_R6TQ60	Putative terminase large subunit	NA
UHGV-0020123_20	eggNOG-mapper	693746.OBV_23980	phage Terminase large subunit	NA
UHGV-0020123_20	COG	COG4373	Mu-like prophage FluMu protein gp28	NA
UHGV-0020123_20	Structural annotation	PF03237, PF17289, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0020123_25	PHROG	phrog_15609	NA	unknown function
UHGV-0020123_25	UniRef90	UniRef90_UPI001C102D5E	NA	NA
UHGV-0020123_25	eggNOG-mapper	693746.OBV_24000	NA	NA
UHGV-0020123_25	Pfam	PF11300	NA	DUF3102
UHGV-0020123_25	COG	COG2433	Possible nuclease of RNase H fold, RuvC/YqgF family	NA
UHGV-0020123_25	Structural annotation	PF11300, NF038070	NA	NA
UHGV-0020123_26	PHROG	phrog_8470	NA	unknown function
UHGV-0020123_26	UniRef90	UniRef90_UPI00195E492B	PcfJ domain-containing protein	NA
UHGV-0020123_26	eggNOG-mapper	1378168.N510_01842	PcfJ-like protein	NA
UHGV-0020123_26	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0020123_26	Structural annotation	PF14284	NA	NA
UHGV-0020123_27	PHROG	phrog_38338	NA	unknown function
UHGV-0020123_27	eggNOG-mapper	693746.OBV_24020	NA	NA
UHGV-0020123_31	Structural annotation	PF15591, MF_01549, NF007981	NA	NA
UHGV-0020123_32	eggNOG-mapper	693746.OBV_21850	NA	NA
UHGV-0020123_33	Structural annotation	PF21291, TIGR03070, COG3655	NA	NA
UHGV-0020123_35	PHROG	phrog_14088	NA	unknown function
UHGV-0020123_35	UniRef90	UniRef90_A0A3E5GTA5	Carboxypeptidase	NA
UHGV-0020123_35	eggNOG-mapper	626523.GCWU000342_01045	NA	NA
UHGV-0020123_39	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0020123_39	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0020123_39	UniRef90	UniRef90_A0A2U1BEG8	Helix-turn-helix protein	NA
UHGV-0020123_39	eggNOG-mapper	445972.ANACOL_03315	NA	NA
UHGV-0020123_39	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0020123_39	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0020123_39	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0020123_41	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0020123_41	PHROG	phrog_5823	transcriptional regulator	transcription regulation
UHGV-0020123_41	UniRef90	UniRef90_A0A810QAJ3	HTH cro/C1-type domain-containing protein	NA
UHGV-0020123_41	eggNOG-mapper	477974.Daud_0777	PFAM helix-turn-helix domain protein	NA
UHGV-0020123_41	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0020123_41	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0020123_42	KOfam	K14059	int; integrase	NA
UHGV-0020123_42	PHROG	phrog_1	integrase	integration and excision
UHGV-0020123_42	UniRef90	UniRef90_UPI001EDEB0AD	site-specific integrase	NA
UHGV-0020123_42	eggNOG-mapper	1226322.HMPREF1545_00144	Belongs to the 'phage' integrase family	NA
UHGV-0020123_42	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0020123_42	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0020123_42	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0020123_44	PHROG	phrog_14770	NA	unknown function
UHGV-0020123_44	eggNOG-mapper	445971.ANASTE_00728	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	NA
UHGV-0020123_44	Pfam	PF18838	Large polyvalent protein associated domain 23	LPD23
UHGV-0020123_44	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-0020123_44	COG	COG0503	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	NA
UHGV-0020123_45	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0020123_46	PHROG	phrog_1129	holin	lysis
UHGV-0020123_46	UniRef90	UniRef90_A0A8D9PDD4	Holin	NA
UHGV-0020123_46	eggNOG-mapper	1007096.BAGW01000036_gene2663	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0020123_46	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0020123_46	Structural annotation	PF06946	NA	NA
UHGV-0020123_47	PHROG	phrog_1863	NA	unknown function
UHGV-0020123_47	eggNOG-mapper	1226322.HMPREF1545_04027	NA	NA
UHGV-0020123_48	KOfam	K03651	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	NA
UHGV-0020123_48	PHROG	phrog_7158	NA	unknown function
UHGV-0020123_48	UniRef90	UniRef90_A0A1E8F0N5	3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA	NA
UHGV-0020123_48	eggNOG-mapper	1151292.QEW_0668	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0020123_48	Pfam	PF00149	Calcineurin-like phosphoesterase	Metallophos
UHGV-0020123_48	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0020123_48	Structural annotation	PF14582, MF_00905, NF008359, COG2129	NA	NA
UHGV-0020123_51	PHROG	phrog_25979	NA	unknown function
UHGV-0020123_51	eggNOG-mapper	483218.BACPEC_01141	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0020123	Yes	39,487 bps	59.98%	100.00%	0.9809
UHGV-0010429	No	41,617 bps	59.24%	99.90%	0.9781
UHGV-0011991	No	40,630 bps	59.60%	99.90%	0.9797
UHGV-0012103	No	39,644 bps	59.99%	99.90%	0.9800
UHGV-0001443	No	39,393 bps	60.06%	99.90%	0.9793
UHGV-0002941	No	39,393 bps	60.06%	99.90%	0.9793
UHGV-0000913	No	35,160 bps	61.00%	90.99%	0.9820
UHGV-0002963	No	21,682 bps	61.31%	56.72%	0.9828