vOTU-043217

Overview

vOTU representative UHGV-0020410

No. of genomes 3

Genome length 53,355 bps

Completeness 100.00% (complete)

Host Agathobaculum butyriciproducens

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-043217
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00027 › vSUBFAM-00446 › vGENUS-06098 › vSUBGEN-21608 › vOTU-043217
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Butyricicoccaceae › Agathobaculum › Agathobaculum butyriciproducens
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020410
BioSample	SAMEA4766064
Genome length	53,355 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	80
CDS density	89.80%
tRNA count	5
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0020410_1	KOfam	K00560	thyA, TYMS; thymidylate synthase [EC:2.1.1.45]	NA
UHGV-0020410_1	PHROG	phrog_5131	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0020410_1	UniRef90	UniRef90_UPI001C7DCF4C	thymidylate synthase	NA
UHGV-0020410_1	eggNOG-mapper	1084719.G3MA60_9CAUD	Thymidylate synthase	NA
UHGV-0020410_1	Pfam	PF00303	Thymidylate synthase	Thymidylat_synt
UHGV-0020410_2	Pfam	PF02223	Thymidylate kinase	Thymidylate_kin
UHGV-0020410_3	UniRef90	UniRef90_A0A5C7Q5I7	Radical SAM/SPASM domain-containing protein	NA
UHGV-0020410_3	Pfam	PF04055	Radical SAM superfamily	Radical_SAM
UHGV-0020410_3	Pfam	PF13186	Iron-sulfur cluster-binding domain	SPASM
UHGV-0020410_3	COG	COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	NA
UHGV-0020410_4	PHROG	phrog_4519	glycosyltransferase	moron, auxiliary metabolic gene and host takeover
UHGV-0020410_4	Pfam	PF20691	TET-Associated Glycosyltransferase	TAGT
UHGV-0020410_4	Structural annotation	PF20691, MF_01072, TIGR03965, COG1216	NA	NA
UHGV-0020410_5	PHROG	phrog_4519	glycosyltransferase	moron, auxiliary metabolic gene and host takeover
UHGV-0020410_5	UniRef90	UniRef90_A0A7G9A312	Glycosyltransferase	NA
UHGV-0020410_5	Pfam	PF20691	TET-Associated Glycosyltransferase	TAGT
UHGV-0020410_5	Structural annotation	PF20691, MF_01072, TIGR03965, COG1216	NA	NA
UHGV-0020410_6	PHROG	phrog_3724	NA	unknown function
UHGV-0020410_6	eggNOG-mapper	1403819.BATR01000122_gene4276	NA	NA
UHGV-0020410_6	Pfam	PF05037	NA	DUF669
UHGV-0020410_6	Structural annotation	PF05037, MF_00292, NF011800, COG2053	NA	NA
UHGV-0020410_7	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0020410_7	UniRef90	UniRef90_A0A2I6PI81	Nucleotide-binding protein	NA
UHGV-0020410_7	Pfam	PF13479	AAA domain	AAA_24
UHGV-0020410_7	Structural annotation	PF13479, MF_00350, TIGR01618, COG2874	NA	NA
UHGV-0020410_8	KOfam	K16899	addB; ATP-dependent helicase/nuclease subunit B [EC:5.6.2.4 3.1.-.-]	NA
UHGV-0020410_8	PHROG	phrog_1218	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0020410_8	UniRef90	UniRef90_A0A3M2CC25	PD-(D/E)XK nuclease family protein	NA
UHGV-0020410_8	Pfam	PF12705	PD-(D/E)XK nuclease superfamily	PDDEXK_1
UHGV-0020410_8	Structural annotation	PF12705, TIGR00372, COG2887	NA	NA
UHGV-0020410_11	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0020410_11	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0020410_11	UniRef90	UniRef90_A0A316P160	DNA polymerase I (Fragment)	NA
UHGV-0020410_11	eggNOG-mapper	1340829.S5Y5D9_9CAUD	DNA polymerase family A	NA
UHGV-0020410_11	PADLOC	drt-cluster58	DRT	DRT
UHGV-0020410_11	Pfam	PF01612	3'-5' exonuclease	DNA_pol_A_exo1
UHGV-0020410_11	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0020410_11	Structural annotation	PF00476, PF01612, MF_04101, NF011539, COG0749	NA	NA
UHGV-0020410_12	Pfam	PF13556	PucR C-terminal helix-turn-helix domain	HTH_30
UHGV-0020410_17	Structural annotation	PF07463	NA	NA
UHGV-0020410_18	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0020410_18	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0020410_18	UniRef90	UniRef90_UPI00148AFDEB	phage/plasmid primase, P4 family	NA
UHGV-0020410_18	eggNOG-mapper	478749.BRYFOR_09102	Phage plasmid primase, P4 family	NA
UHGV-0020410_18	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0020410_18	Pfam	PF19263	NA	DUF5906
UHGV-0020410_18	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0020410_18	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0020410_18	Structural annotation	PF19263, PF08706, PF03288, PF09250, MF_04000, TIGR01613, COG3378	NA	NA
UHGV-0020410_19	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0020410_20	KOfam	K01493	comEB; dCMP deaminase [EC:3.5.4.12]	NA
UHGV-0020410_20	PHROG	phrog_174	dCMP deaminase	DNA, RNA and nucleotide metabolism
UHGV-0020410_20	UniRef90	UniRef90_A0A4Z0W2C4	dCMP deaminase family protein	NA
UHGV-0020410_20	eggNOG-mapper	443254.Marpi_1578	PFAM CMP dCMP deaminase zinc-binding	NA
UHGV-0020410_20	PADLOC	dCTPase	NA	NA
UHGV-0020410_20	Pfam	PF14437	MafB19-like deaminase	MafB19-deam
UHGV-0020410_20	COG	COG2131	Deoxycytidylate deaminase	NA
UHGV-0020410_20	Structural annotation	PF00383, MF_00972, TIGR02571, COG2131	NA	NA
UHGV-0020410_22	PHROG	phrog_2396	NA	unknown function
UHGV-0020410_22	UniRef90	UniRef90_G8GDM9	aGPT-Pplase1 domain-containing protein	NA
UHGV-0020410_22	eggNOG-mapper	637730.C8XUN9_9CAUD	NA	NA
UHGV-0020410_22	Pfam	PF18723	5-hmdU DNA kinase, helical domain	HMUDK_hel
UHGV-0020410_22	Structural annotation	PF18723	NA	NA
UHGV-0020410_24	PHROG	phrog_5889	NA	unknown function
UHGV-0020410_24	UniRef90	UniRef90_A0A7W3SX10	HD superfamily phosphohydrolase YqeK	NA
UHGV-0020410_24	eggNOG-mapper	1219626.HMPREF1639_07345	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-0020410_24	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0020410_25	PHROG	phrog_421	NA	unknown function
UHGV-0020410_25	UniRef90	UniRef90_UPI00098002A8	NA	NA
UHGV-0020410_25	eggNOG-mapper	768706.Desor_3312	NA	NA
UHGV-0020410_25	Pfam	PF10979	NA	DUF2786
UHGV-0020410_25	COG	COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	NA
UHGV-0020410_25	Structural annotation	PF10979	NA	NA
UHGV-0020410_30	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0020410_30	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0020410_30	Structural annotation	PF16677	NA	NA
UHGV-0020410_33	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0020410_33	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0020410_33	UniRef90	UniRef90_UPI00101D64CF	PBSX family phage terminase large subunit	NA
UHGV-0020410_33	eggNOG-mapper	1443122.Z958_p0035	Phage terminase, large subunit, PBSX family	NA
UHGV-0020410_33	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0020410_33	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0020410_33	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0020410_33	COG	COG1783	Phage terminase large subunit	NA
UHGV-0020410_33	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0020410_35	PHROG	phrog_64	portal protein	head and packaging
UHGV-0020410_35	UniRef90	UniRef90_UPI0008331C88	phage portal protein	NA
UHGV-0020410_35	eggNOG-mapper	1121342.AUCO01000012_gene1700	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0020410_35	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0020410_35	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0020410_37	PHROG	phrog_419	NA	unknown function
UHGV-0020410_37	UniRef90	UniRef90_UPI0011A81AA2	potassium-transporting ATPase subunit KdpA	NA
UHGV-0020410_37	eggNOG-mapper	588581.Cpap_1462	NA	NA
UHGV-0020410_37	Structural annotation	PF14083	NA	NA
UHGV-0020410_40	KOfam	K11044	spyA; C3 family ADP-ribosyltransferase [EC:2.4.2.-]	NA
UHGV-0020410_40	PHROG	phrog_21401	pilot protein for DNA ejection	tail
UHGV-0020410_40	UniRef90	UniRef90_A0A349YJR5	ADPrib_exo_Tox domain-containing protein	NA
UHGV-0020410_40	eggNOG-mapper	748727.CLJU_c31360	Portal protein	NA
UHGV-0020410_40	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0020410_40	Pfam	PF03496	ADP-ribosyltransferase exoenzyme	ADPrib_exo_Tox
UHGV-0020410_40	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0020410_40	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0020410_40	Structural annotation	PF03496, NF040688	NA	NA
UHGV-0020410_42	KOfam	K05521	draG; ADP-ribosyl-[dinitrogen reductase] hydrolase [EC:3.2.2.24]	NA
UHGV-0020410_42	PHROG	phrog_6572	ADP-ribosylglycohydrolase	other
UHGV-0020410_42	UniRef90	UniRef90_A0A095XFD7	Adhesin	NA
UHGV-0020410_42	eggNOG-mapper	525282.HMPREF0391_10767	ADP-ribosylglycohydrolase	NA
UHGV-0020410_42	Pfam	PF03747	ADP-ribosylglycohydrolase	ADP_ribosyl_GH
UHGV-0020410_42	COG	COG1397	ADP-ribosylglycohydrolase	NA
UHGV-0020410_43	eggNOG-mapper	658655.HMPREF0988_00863	NA	NA
UHGV-0020410_46	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0020410_46	eggNOG-mapper	1460640.JCM19046_3518	NA	NA
UHGV-0020410_46	Structural annotation	PF10788, MF_02110	NA	NA
UHGV-0020410_47	PHROG	phrog_909	major head protein	head and packaging
UHGV-0020410_47	UniRef90	UniRef90_A0A4D6A2S3	Major capsid protein	NA
UHGV-0020410_47	eggNOG-mapper	1158612.I580_01911	NA	NA
UHGV-0020410_47	Structural annotation	PF02924	NA	NA
UHGV-0020410_48	PHROG	phrog_29	major head protein	head and packaging
UHGV-0020410_48	UniRef90	UniRef90_A0A845LLD6	Phage capsid protein	NA
UHGV-0020410_48	eggNOG-mapper	1158612.I580_01912	Phage major capsid protein E	NA
UHGV-0020410_48	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0020410_48	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0020410_49	Structural annotation	PF07498	NA	NA
UHGV-0020410_50	PHROG	phrog_4020	NA	unknown function
UHGV-0020410_50	eggNOG-mapper	1443122.Z958_05850	NA	NA
UHGV-0020410_51	PHROG	phrog_8435	NA	unknown function
UHGV-0020410_51	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0020410_52	eggNOG-mapper	1567015.A0A0A7RUL9_9VIRU	NA	NA
UHGV-0020410_52	Structural annotation	PF04883, TIGR01725	NA	NA
UHGV-0020410_53	PHROG	phrog_7585	NA	unknown function
UHGV-0020410_53	eggNOG-mapper	1121342.AUCO01000012_gene1689	NA	NA
UHGV-0020410_53	Structural annotation	PF05657, COG5003	NA	NA
UHGV-0020410_54	PHROG	phrog_6686	tail tube protein	tail
UHGV-0020410_54	UniRef90	UniRef90_A0A1C6KI12	S-l_SbsC_C domain-containing protein	NA
UHGV-0020410_54	eggNOG-mapper	1304880.JAGB01000002_gene2211	NA	NA
UHGV-0020410_54	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0020410_55	PHROG	phrog_6280	NA	unknown function
UHGV-0020410_55	UniRef90	UniRef90_UPI00164A5347	esterase	NA
UHGV-0020410_55	eggNOG-mapper	332101.JIBU02000023_gene4728	NA	NA
UHGV-0020410_56	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0020410_56	UniRef90	UniRef90_UPI0018A93F3A	phage tail tape measure protein	NA
UHGV-0020410_56	eggNOG-mapper	1410624.JNKK01000017_gene1985	Phage-related minor tail protein	NA
UHGV-0020410_56	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0020410_56	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0020410_56	COG	COG5283	Phage-related tail protein	NA
UHGV-0020410_56	Structural annotation	PF10145, TIGR01760, COG3941	NA	NA
UHGV-0020410_57	PHROG	phrog_36410	NA	unknown function
UHGV-0020410_57	UniRef90	UniRef90_A0A7X9C3E1	Phage tail family protein	NA
UHGV-0020410_57	eggNOG-mapper	431943.CKL_4056	Phage tail protein	NA
UHGV-0020410_57	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0020410_57	COG	COG4722	Phage-related protein YomH	NA
UHGV-0020410_57	Structural annotation	PF20753, PF16774, TIGR01633, COG4722	NA	NA
UHGV-0020410_58	PHROG	phrog_538	minor tail protein	tail
UHGV-0020410_58	UniRef90	UniRef90_UPI00051407C7	siphovirus ReqiPepy6 Gp37-like family protein	NA
UHGV-0020410_58	eggNOG-mapper	536232.CLM_2044	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-0020410_58	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0020410_58	Structural annotation	PF14594, TIGR01665, COG4379	NA	NA
UHGV-0020410_59	PHROG	phrog_1220	head protein	head and packaging
UHGV-0020410_59	eggNOG-mapper	1033737.CAEV01000028_gene283	NA	NA
UHGV-0020410_60	PHROG	phrog_1348	tail fiber protein	tail
UHGV-0020410_60	UniRef90	UniRef90_A0A417WCN8	Acyl carrier protein	NA
UHGV-0020410_60	eggNOG-mapper	1297617.JPJD01000014_gene875	NA	NA
UHGV-0020410_60	Structural annotation	PF14301	NA	NA
UHGV-0020410_61	PHROG	phrog_20274	NA	unknown function
UHGV-0020410_61	UniRef90	UniRef90_A0A174IH88	Membrane protein	NA
UHGV-0020410_61	eggNOG-mapper	1203606.HMPREF1526_00964	Putative ABC-transporter type IV	NA
UHGV-0020410_61	Pfam	PF06541	Putative ABC-transporter type IV	ABC_trans_CmpB
UHGV-0020410_61	COG	COG4905	NA	NA
UHGV-0020410_61	Structural annotation	PF06541, COG4905	NA	NA
UHGV-0020410_62	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0020410_62	PHROG	phrog_435	endolysin	lysis
UHGV-0020410_62	UniRef90	UniRef90_UPI00164B89AA	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020410_62	eggNOG-mapper	1408437.JNJN01000047_gene708	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0020410_62	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0020410_62	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0020410_63	PHROG	phrog_10091	holin	lysis
UHGV-0020410_63	UniRef90	UniRef90_UPI001D0F1682	phage holin	NA
UHGV-0020410_63	eggNOG-mapper	97139.C824_05950	Bacteriophage holin	NA
UHGV-0020410_63	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0020410_63	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0020410_63	COG	COG5546	NA	NA
UHGV-0020410_63	Structural annotation	COG5546	NA	NA
UHGV-0020410_67	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0020410_67	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0020410_67	Structural annotation	PF04545, MF_00674, NF008895, COG2739	NA	NA
UHGV-0020410_70	PHROG	phrog_16490	NA	unknown function
UHGV-0020410_70	eggNOG-mapper	1408437.JNJN01000043_gene803	NA	NA
UHGV-0020410_71	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0020410_73	Structural annotation	PF00210, MF_01441, NF011597, COG1528	NA	NA
UHGV-0020410_74	PHROG	phrog_30451	NA	unknown function
UHGV-0020410_74	UniRef90	UniRef90_UPI0006A7B5FD	zinc finger-like domain-containing protein	NA
UHGV-0020410_74	eggNOG-mapper	879630.E1A2C1_9CAUD	NA	NA
UHGV-0020410_76	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0020410_76	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0020410_76	UniRef90	UniRef90_A0A1V5E5D6	Helicase ATP-binding domain-containing protein	NA
UHGV-0020410_76	eggNOG-mapper	545696.HOLDEFILI_03763	SNF2 family N-terminal domain	NA
UHGV-0020410_76	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0020410_76	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0020410_76	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0020410_76	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0020410_76	Structural annotation	PF00176, PF00271, MF_01821, NF041790, COG0553	NA	NA
UHGV-0020410_77	eggNOG-mapper	720554.Clocl_3606	pfam vrr-nuc	NA
UHGV-0020410_77	COG	COG1591	Holliday junction resolvase Hjc, archaeal type	NA
UHGV-0020410_77	Structural annotation	PF01870, MF_01490, NF002581, COG1591	NA	NA
UHGV-0020410_78	PHROG	phrog_24386	NA	unknown function
UHGV-0020410_78	UniRef90	UniRef90_A0A2K9V2Y7	Polynucleotide kinase	NA
UHGV-0020410_78	eggNOG-mapper	478749.BRYFOR_08546	UMP catabolic process	NA
UHGV-0020410_78	COG	COG0647	Ribonucleotide monophosphatase NagD, HAD superfamily	NA
UHGV-0020410_78	Structural annotation	TIGR01689, COG0241	NA	NA
UHGV-0020410_80	KOfam	K00560	thyA, TYMS; thymidylate synthase [EC:2.1.1.45]	NA
UHGV-0020410_80	PHROG	phrog_5131	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0020410_80	UniRef90	UniRef90_A0A0F9AS08	Thymidylat_synt domain-containing protein	NA
UHGV-0020410_80	eggNOG-mapper	1136417.AZWE01000077_gene278	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis	NA
UHGV-0020410_80	Pfam	PF00303	Thymidylate synthase	Thymidylat_synt
UHGV-0020410_80	COG	COG0207	Thymidylate synthase	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0020410	Yes	53,355 bps	43.61%	100.00%	0.9778
UHGV-0324168	No	26,058 bps	43.27%	50.40%	0.9792
UHGV-0284065	No	10,052 bps	44.41%	19.82%	0.9780