vOTU-043338

Overview

vOTU representative UHGV-0022094

No. of genomes 2

Genome length 39,344 bps

Completeness 100.00% (complete)

Host CAG-41 sp900066215

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-043338
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00837 › vGENUS-20011 › vSUBGEN-39117 › vOTU-043338
Host taxonomy	Bacteria › Firmicutes A › Clostridia › UBA1381 › UBA1381 › CAG-41 › CAG-41 sp900066215
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0022094
BioSample	SAMEA4766240
Genome length	39,344 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	92.69%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0022094_2	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-0022094_2	UniRef90	UniRef90_A0A1C6FU84	Putative zinc finger/helix-turn-helix protein, YgiT family	NA
UHGV-0022094_2	eggNOG-mapper	1033802.SSPSH_001482	Helix-turn-helix XRE-family like proteins	NA
UHGV-0022094_2	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0022094_2	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0022094_2	Structural annotation	PF01381, NF040522, COG2944	NA	NA
UHGV-0022094_3	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0022094_3	PHROG	phrog_435	endolysin	lysis
UHGV-0022094_3	UniRef90	UniRef90_A0A1C6FU16	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0022094_3	eggNOG-mapper	272563.CD630_09720	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0022094_3	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0022094_3	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0022094_3	Structural annotation	PF01520, PF18342, MF_00417, TIGR02883, COG0860, COG4991	NA	NA
UHGV-0022094_4	PHROG	phrog_443	holin	lysis
UHGV-0022094_4	UniRef90	UniRef90_UPI0009B98E42	holin	NA
UHGV-0022094_4	eggNOG-mapper	1235800.C819_01425	Putative lactococcus lactis phage r1t holin	NA
UHGV-0022094_4	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0022094_4	Structural annotation	PF16945	NA	NA
UHGV-0022094_5	PHROG	phrog_937	hemolysin	other
UHGV-0022094_5	eggNOG-mapper	693746.OBV_19000	NA	NA
UHGV-0022094_8	PHROG	phrog_21765	NA	unknown function
UHGV-0022094_8	UniRef90	UniRef90_A0A1C6CU08	Pectate_lyase_3 domain-containing protein	NA
UHGV-0022094_8	eggNOG-mapper	483218.BACPEC_01141	NA	NA
UHGV-0022094_9	UniRef90	UniRef90_A0A316P9E8	Cu_amine_oxidN1 domain-containing protein	NA
UHGV-0022094_9	eggNOG-mapper	1408422.JHYF01000017_gene1892	NA	NA
UHGV-0022094_9	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-0022094_10	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0022094_10	UniRef90	UniRef90_A0A1C6E329	Phage-related protein	NA
UHGV-0022094_10	eggNOG-mapper	755731.Clo1100_1175	Phage minor structural protein	NA
UHGV-0022094_10	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0022094_10	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0022094_10	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0022094_10	COG	COG4926	Phage-related protein	NA
UHGV-0022094_10	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0022094_11	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0022094_11	UniRef90	UniRef90_R6NBX8	Phage-related protein	NA
UHGV-0022094_11	eggNOG-mapper	86416.Clopa_3365	PFAM Phage tail protein	NA
UHGV-0022094_11	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0022094_11	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0022094_11	COG	COG4722	Phage-related protein YomH	NA
UHGV-0022094_11	Structural annotation	PF05709, PF21766, TIGR01633, COG4722	NA	NA
UHGV-0022094_12	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-0022094_12	PHROG	phrog_17321	NA	unknown function
UHGV-0022094_12	UniRef90	UniRef90_A0A416CW06	Phage tail tape measure protein	NA
UHGV-0022094_12	eggNOG-mapper	536232.CLM_2046	phage tail tape measure protein	NA
UHGV-0022094_12	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0022094_12	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0022094_12	COG	COG1340	NA	NA
UHGV-0022094_12	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0022094_14	PHROG	phrog_88	major tail protein	tail
UHGV-0022094_14	UniRef90	UniRef90_A0A1C6E366	Phage major tail protein, phi13 family	NA
UHGV-0022094_14	eggNOG-mapper	1295642.H839_15928	NA	NA
UHGV-0022094_14	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0022094_14	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0022094_15	PHROG	phrog_78	tail terminator	connector
UHGV-0022094_15	Structural annotation	PF05657	NA	NA
UHGV-0022094_16	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0022094_16	UniRef90	UniRef90_A0A7X5KS36	HK97 gp10 family phage protein	NA
UHGV-0022094_16	eggNOG-mapper	562981.HMPREF0428_01816	NA	NA
UHGV-0022094_16	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0022094_16	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0022094_16	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0022094_17	eggNOG-mapper	931276.Cspa_c26940	NA	NA
UHGV-0022094_17	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0022094_17	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0022094_18	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0022094_18	UniRef90	UniRef90_UPI00195DE3AA	phage head-tail connector protein	NA
UHGV-0022094_18	eggNOG-mapper	97138.C820_00227	Phage gp6-like head-tail connector protein	NA
UHGV-0022094_18	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0022094_18	Structural annotation	PF05135	NA	NA
UHGV-0022094_19	PHROG	phrog_10	major head protein	head and packaging
UHGV-0022094_19	UniRef90	UniRef90_A0A1C6E4H6	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0022094_19	eggNOG-mapper	1123250.KB908414_gene2105	Phage capsid family	NA
UHGV-0022094_19	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0022094_19	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0022094_19	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0022094_19	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0022094_19	Structural annotation	PF05065, PF13620, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0022094_20	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0022094_20	UniRef90	UniRef90_A0A416CVN6	NA	NA
UHGV-0022094_20	eggNOG-mapper	1123250.KB908414_gene2104	NA	NA
UHGV-0022094_20	Pfam	PF14265	NA	DUF4355
UHGV-0022094_20	Structural annotation	PF14265	NA	NA
UHGV-0022094_22	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0022094_22	UniRef90	UniRef90_A0A416CW54	Phage_Mu_F domain-containing protein	NA
UHGV-0022094_22	eggNOG-mapper	1294142.CINTURNW_1685	Phage Mu protein F like protein	NA
UHGV-0022094_22	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0022094_22	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0022094_22	COG	COG2369	NA	NA
UHGV-0022094_22	Structural annotation	PF04233, PF00583, TIGR01641, NF000487, COG1246, COG2369	NA	NA
UHGV-0022094_23	PHROG	phrog_64	portal protein	head and packaging
UHGV-0022094_23	UniRef90	UniRef90_A0A416CW21	Phage portal protein	NA
UHGV-0022094_23	eggNOG-mapper	1461246.X2KPH1_9VIRU	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0022094_23	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0022094_23	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0022094_23	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0022094_24	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0022094_24	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0022094_24	UniRef90	UniRef90_A0A416CVQ3	PBSX family phage terminase large subunit	NA
UHGV-0022094_24	eggNOG-mapper	1256908.HMPREF0373_00486	Phage terminase, large subunit, PBSX family	NA
UHGV-0022094_24	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0022094_24	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0022094_24	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0022094_24	COG	COG1783	Phage terminase large subunit	NA
UHGV-0022094_24	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0022094_25	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0022094_25	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0022094_25	UniRef90	UniRef90_UPI00051C2283	terminase small subunit	NA
UHGV-0022094_25	eggNOG-mapper	1256908.HMPREF0373_00489	Terminase small subunit	NA
UHGV-0022094_25	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0022094_25	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0022094_25	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0022094_26	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0022094_26	UniRef90	UniRef90_A0A3D3FGT2	Sigma70_r4 domain-containing protein	NA
UHGV-0022094_26	eggNOG-mapper	1120978.KB894081_gene99	NA	NA
UHGV-0022094_26	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0022094_26	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0022094_29	eggNOG-mapper	1235802.C823_04654	NA	NA
UHGV-0022094_30	PHROG	phrog_8684	NA	unknown function
UHGV-0022094_30	UniRef90	UniRef90_A0A1C6BLK1	YopX protein	NA
UHGV-0022094_30	eggNOG-mapper	411473.RUMCAL_00280	YopX protein	NA
UHGV-0022094_30	Pfam	PF09643	YopX protein	YopX
UHGV-0022094_30	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0022094_30	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0022094_32	PHROG	phrog_3032	NA	unknown function
UHGV-0022094_32	eggNOG-mapper	610130.Closa_1374	NA	NA
UHGV-0022094_34	Structural annotation	PF08141, MF_00667, TIGR02861, COG0231	NA	NA
UHGV-0022094_35	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0022094_35	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0022094_35	UniRef90	UniRef90_A0A1C6CSJ7	Holliday junction resolvase	NA
UHGV-0022094_35	eggNOG-mapper	478749.BRYFOR_07588	endodeoxyribonuclease RusA	NA
UHGV-0022094_35	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0022094_35	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0022094_35	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0022094_36	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-0022094_36	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0022094_36	UniRef90	UniRef90_A0A1C6CSE0	Regulatory protein repA	NA
UHGV-0022094_36	eggNOG-mapper	1232449.BAHV02000008_gene621	Primase C terminal 2 (PriCT-2)	NA
UHGV-0022094_36	Pfam	PF08707	Primase C terminal 2 (PriCT-2)	PriCT_2
UHGV-0022094_36	Pfam	PF13481	AAA domain	AAA_25
UHGV-0022094_36	COG	COG3598	RecA-family ATPase	NA
UHGV-0022094_36	Structural annotation	PF13481, PF16793, PF08220, MF_00350, MF_00700, NF006606, NF001641, COG3598, COG3285	NA	NA
UHGV-0022094_37	KOfam	K17677	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	NA
UHGV-0022094_37	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0022094_37	UniRef90	UniRef90_A0A1C6CSB9	Excinuclease ABC subunit B	NA
UHGV-0022094_37	eggNOG-mapper	1235798.C817_03499	helicase superfamily c-terminal domain	NA
UHGV-0022094_37	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0022094_37	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0022094_37	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0022094_37	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0022094_37	Structural annotation	PF04851, PF16203, MF_01489, NF008521, COG1061	NA	NA
UHGV-0022094_38	PHROG	phrog_2698	NA	unknown function
UHGV-0022094_38	UniRef90	UniRef90_UPI001106D01D	NA	NA
UHGV-0022094_38	eggNOG-mapper	394503.Ccel_3308	NA	NA
UHGV-0022094_38	Structural annotation	PF05037	NA	NA
UHGV-0022094_39	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0022094_39	UniRef90	UniRef90_A0A2N0UXR5	Phage nucleotide-binding protein	NA
UHGV-0022094_39	eggNOG-mapper	645991.Sgly_0321	AAA domain	NA
UHGV-0022094_39	Pfam	PF13479	AAA domain	AAA_24
UHGV-0022094_39	Structural annotation	PF13479, MF_00268, TIGR01618, COG0468	NA	NA
UHGV-0022094_40	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-0022094_40	PHROG	phrog_1499	NA	unknown function
UHGV-0022094_40	UniRef90	UniRef90_A0A1C6CT75	Chromosome segregation protein	NA
UHGV-0022094_40	eggNOG-mapper	645991.Sgly_0320	domain protein	NA
UHGV-0022094_40	Pfam	PF13476	AAA domain	AAA_23
UHGV-0022094_40	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0022094_40	Structural annotation	PF11398, MF_00365, TIGR00634, COG0497	NA	NA
UHGV-0022094_41	Structural annotation	PF17574	NA	NA
UHGV-0022094_42	Structural annotation	PF10922	NA	NA
UHGV-0022094_46	UniRef90	UniRef90_A0A1C6FWP6	Helix-turn-helix domain	NA
UHGV-0022094_46	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0022094_46	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0022094_46	Structural annotation	PF12728, TIGR01764, COG3311	NA	NA
UHGV-0022094_48	PHROG	phrog_585	NA	unknown function
UHGV-0022094_48	UniRef90	UniRef90_UPI000DEA6389	NA	NA
UHGV-0022094_48	eggNOG-mapper	1035189.HMPREF9954_1966	NA	NA
UHGV-0022094_48	Pfam	PF10711	NA	DUF2513
UHGV-0022094_48	Structural annotation	PF10711, MF_01819, TIGR03433, COG3432	NA	NA
UHGV-0022094_50	eggNOG-mapper	929506.CbC4_1187	NA	NA
UHGV-0022094_50	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0022094_51	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0022094_51	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0022094_51	UniRef90	UniRef90_A0A1C6FWX3	LexA repressor	NA
UHGV-0022094_51	eggNOG-mapper	887929.HMP0721_0588	Cytoplasmic, score 8.87	NA
UHGV-0022094_51	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0022094_51	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0022094_51	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-0022094_52	KOfam	K14059	int; integrase	NA
UHGV-0022094_52	PHROG	phrog_1	integrase	integration and excision
UHGV-0022094_52	UniRef90	UniRef90_A0A1C6FW60	Tyrosine recombinase XerD	NA
UHGV-0022094_52	eggNOG-mapper	1235799.C818_03513	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0022094_52	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0022094_52	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0022094_52	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0022094_52	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0022094	Yes	39,344 bps	39.83%	100.00%	0.9783
UHGV-0096378	No	11,556 bps	38.79%	28.47%	0.9702