vOTU-044045

Overview

No. of genomes 8

Genome length 38,167 bps

Completeness 100.00% (complete)

Host UBA660

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-044045
Number of genomes	8
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-02859 › vGENUS-03765 › vSUBGEN-18880 › vOTU-044045
Host taxonomy	Bacteria › Firmicutes › Bacilli › RF39 › UBA660
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0030134
BioSample	SAMEA4766295
Genome length	38,167 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	60
CDS density	93.07%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0030134_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0030134_1	PHROG	phrog_95	integrase	integration and excision
UHGV-0030134_1	UniRef90	UniRef90_R6HPK6	Resolvase	NA
UHGV-0030134_1	eggNOG-mapper	1128398.Curi_c22150	Resolvase, N terminal domain	NA
UHGV-0030134_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0030134_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-0030134_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0030134_1	Structural annotation	PF07508, PF00239, PF05384, NF041201, COG1961	NA	NA
UHGV-0030134_3	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0030134_3	UniRef90	UniRef90_A0A7V2ANN3	XRE family transcriptional regulator	NA
UHGV-0030134_3	eggNOG-mapper	1499683.CCFF01000017_gene2775	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0030134_3	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0030134_4	UniRef90	UniRef90_UPI0004801E75	helix-turn-helix transcriptional regulator	NA
UHGV-0030134_4	eggNOG-mapper	926692.AZYG01000066_gene2149	NA	NA
UHGV-0030134_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0030134_4	Structural annotation	PF05339, NF007271, COG3655	NA	NA
UHGV-0030134_7	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0030134_7	eggNOG-mapper	742733.HMPREF9469_01845	NA	NA
UHGV-0030134_7	Structural annotation	PF10771, MF_01177, TIGR01714, COG3935	NA	NA
UHGV-0030134_8	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0030134_8	UniRef90	UniRef90_A0A7X5DCK8	Recombinase	NA
UHGV-0030134_8	eggNOG-mapper	1121441.AUCX01000014_gene536	YqaJ-like viral recombinase domain	NA
UHGV-0030134_8	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0030134_8	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0030134_8	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0030134_8	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0030134_9	PHROG	phrog_674	NA	unknown function
UHGV-0030134_9	UniRef90	UniRef90_A0A4P9C8L7	NA	NA
UHGV-0030134_9	eggNOG-mapper	1121441.AUCX01000014_gene537	NA	NA
UHGV-0030134_9	Pfam	PF07083	NA	DUF1351
UHGV-0030134_9	Structural annotation	PF07083	NA	NA
UHGV-0030134_10	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0030134_10	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0030134_10	UniRef90	UniRef90_R6E1Z6	Recombinase phage RecT family	NA
UHGV-0030134_10	eggNOG-mapper	1095750.HMPREF9970_1675	RecT family	NA
UHGV-0030134_10	Pfam	PF03837	RecT family	RecT
UHGV-0030134_10	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0030134_10	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0030134_10	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0030134_12	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0030134_12	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0030134_12	UniRef90	UniRef90_A8MED5	Single-stranded DNA-binding protein	NA
UHGV-0030134_12	eggNOG-mapper	350688.Clos_0036	Single-stranded DNA-binding protein	NA
UHGV-0030134_12	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0030134_12	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0030134_12	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0030134_12	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0030134_12	Structural annotation	PF00436, MF_00984, NF005242, COG0629	NA	NA
UHGV-0030134_13	PHROG	phrog_25509	NA	unknown function
UHGV-0030134_14	PHROG	phrog_7370	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0030134_14	UniRef90	UniRef90_A0A7K3ZA74	HNH endonuclease	NA
UHGV-0030134_14	eggNOG-mapper	1232449.BAHV02000016_gene1841	HNH nucleases	NA
UHGV-0030134_25	PHROG	phrog_625	NA	unknown function
UHGV-0030134_25	UniRef90	UniRef90_A0A373D1H8	ASCH domain-containing protein	NA
UHGV-0030134_25	eggNOG-mapper	411463.EUBVEN_00477	NA	NA
UHGV-0030134_25	Structural annotation	PF12961, NF003443, COG2947	NA	NA
UHGV-0030134_30	Pfam	PF04545	Sigma-70, region 4	Sigma70_r4
UHGV-0030134_30	Structural annotation	PF04545, MF_00674, NF008895, COG1595	NA	NA
UHGV-0030134_33	UniRef90	UniRef90_A0A353JAA0	Terminase_3 domain-containing protein (Fragment)	NA
UHGV-0030134_33	eggNOG-mapper	428125.CLOLEP_01805	NA	NA
UHGV-0030134_34	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0030134_34	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0030134_34	UniRef90	UniRef90_R6DVT6	Phage terminase large subunit PBSX family	NA
UHGV-0030134_34	eggNOG-mapper	1120998.AUFC01000030_gene2231	Phage terminase, large subunit, PBSX family	NA
UHGV-0030134_34	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0030134_34	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0030134_34	COG	COG1783	Phage terminase large subunit	NA
UHGV-0030134_34	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0030134_35	PHROG	phrog_533	portal protein	head and packaging
UHGV-0030134_35	UniRef90	UniRef90_UPI001F061150	phage portal protein	NA
UHGV-0030134_35	eggNOG-mapper	428127.EUBDOL_01228	phage minor capsid protein	NA
UHGV-0030134_35	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0030134_36	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0030134_36	UniRef90	UniRef90_R5XZV2	Protein gp4	NA
UHGV-0030134_36	eggNOG-mapper	525255.HMPREF0077_0390	Phage minor capsid protein 2	NA
UHGV-0030134_36	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0030134_36	Pfam	PF15542	Bacterial toxin 50	Ntox50
UHGV-0030134_36	COG	COG2369	NA	NA
UHGV-0030134_36	Structural annotation	PF06152	NA	NA
UHGV-0030134_37	Structural annotation	PF07073, MF_01077, NF037951, COG4568	NA	NA
UHGV-0030134_38	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0030134_38	UniRef90	UniRef90_UPI00088D90B8	phage scaffolding protein	NA
UHGV-0030134_38	eggNOG-mapper	1209989.TepiRe1_1150	Phage minor structural protein GP20	NA
UHGV-0030134_38	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0030134_38	Structural annotation	PF06810	NA	NA
UHGV-0030134_39	PHROG	phrog_212	major head protein	head and packaging
UHGV-0030134_39	UniRef90	UniRef90_A0A2N2DPS1	Phage capsid protein	NA
UHGV-0030134_39	eggNOG-mapper	1294142.CINTURNW_1029	NA	NA
UHGV-0030134_39	Structural annotation	PF05065, MF_04119, NF041162, COG4653	NA	NA
UHGV-0030134_40	PHROG	phrog_15682	NA	unknown function
UHGV-0030134_40	eggNOG-mapper	935836.JAEL01000086_gene51	NA	NA
UHGV-0030134_42	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0030134_42	UniRef90	UniRef90_I3DXZ4	Protein gp8	NA
UHGV-0030134_42	eggNOG-mapper	665959.HMPREF1013_00198	NA	NA
UHGV-0030134_43	PHROG	phrog_3366	NA	unknown function
UHGV-0030134_43	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0030134_43	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0030134_44	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0030134_44	UniRef90	UniRef90_A0A413FZ75	Minor capsid protein	NA
UHGV-0030134_44	eggNOG-mapper	552396.HMPREF0863_00274	Minor capsid protein	NA
UHGV-0030134_44	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0030134_44	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0030134_45	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0030134_46	PHROG	phrog_820	major tail protein	tail
UHGV-0030134_46	UniRef90	UniRef90_A0A174M1L1	S-l_SbsC_C domain-containing protein	NA
UHGV-0030134_46	eggNOG-mapper	573061.Clocel_3536	NA	NA
UHGV-0030134_46	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0030134_48	PHROG	phrog_706	NA	unknown function
UHGV-0030134_48	UniRef90	UniRef90_UPI000CF9A546	Gp15 family bacteriophage protein	NA
UHGV-0030134_48	eggNOG-mapper	642492.Clole_0828	Bacteriophage Gp15 protein	NA
UHGV-0030134_48	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0030134_48	Structural annotation	PF06854	NA	NA
UHGV-0030134_49	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0030134_49	UniRef90	UniRef90_E0IBU3	Phage-related protein-like protein	NA
UHGV-0030134_49	eggNOG-mapper	717606.PaecuDRAFT_3132	Phage-related minor tail protein	NA
UHGV-0030134_49	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0030134_49	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0030134_50	PHROG	phrog_1194	NA	unknown function
UHGV-0030134_51	PHROG	phrog_2929	tail fiber protein	tail
UHGV-0030134_51	eggNOG-mapper	469596.HMPREF9488_01330	NA	NA
UHGV-0030134_51	Pfam	PF04862	NA	DUF642
UHGV-0030134_51	Structural annotation	PF04862, PF05113, NF033848, NF033675, COG4379	NA	NA
UHGV-0030134_52	PHROG	phrog_372	tail protein	tail
UHGV-0030134_52	UniRef90	UniRef90_UPI001DD29580	NA	NA
UHGV-0030134_52	eggNOG-mapper	1406785.U5PU90_9CAUD	N-acetylmuramoyl-L-alanine amidase activity	NA
UHGV-0030134_52	Pfam	PF05895	NA	DUF859
UHGV-0030134_52	Structural annotation	PF05895, MF_04116, NF010681, NF012201, COG3291	NA	NA
UHGV-0030134_53	eggNOG-mapper	1123075.AUDP01000020_gene1531	NA	NA
UHGV-0030134_55	PHROG	phrog_5302	tail protein	tail
UHGV-0030134_55	UniRef90	UniRef90_A0A564TJE3	BppU_N domain-containing protein	NA
UHGV-0030134_55	eggNOG-mapper	411470.RUMGNA_00248	Phage tail-collar fibre protein	NA
UHGV-0030134_55	Pfam	PF18454	Major tropism determinant N-terminal domain	Mtd_N
UHGV-0030134_55	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0030134_55	Structural annotation	PF18454	NA	NA
UHGV-0030134_56	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0030134_56	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0030134_56	UniRef90	UniRef90_A0A7X0LXI1	Reverse transcriptase domain-containing protein	NA
UHGV-0030134_56	eggNOG-mapper	755164.D6PSR5_9CAUD	RNA-directed DNA polymerase activity	NA
UHGV-0030134_56	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0030134_56	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0030134_56	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0030134_57	PHROG	phrog_4912	tail fiber assembly	tail
UHGV-0030134_57	Pfam	PF16778	Phage tail assembly chaperone protein	Phage_tail_APC
UHGV-0030134_57	Structural annotation	PF16778	NA	NA
UHGV-0030134_60	UniRef90	UniRef90_A0A3B9T5N2	Peptidase C51 domain-containing protein	NA
UHGV-0030134_60	eggNOG-mapper	1118055.CAGU01000013_gene758	Cpl-7 lysozyme C-terminal domain protein	NA
UHGV-0030134_60	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0030134_60	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0030134_60	Structural annotation	COG3942	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0030134	Yes	38,167 bps	32.75%	100.00%	0.9806
UHGV-0018159	No	38,318 bps	32.79%	99.90%	0.9803
UHGV-0016439	No	38,104 bps	32.76%	99.90%	0.9801
UHGV-1507729	No	37,789 bps	32.78%	99.90%	0.9795
UHGV-0006701	No	34,470 bps	32.98%	91.38%	0.9805
UHGV-1531848	No	34,202 bps	32.71%	90.67%	0.9797
UHGV-1465187	No	20,448 bps	33.40%	54.21%	0.9818
UHGV-1671982	No	11,124 bps	33.33%	29.49%	0.9827