vOTU-044180

Overview

vOTU representative UHGV-0031936

No. of genomes 1

Genome length 40,945 bps

Completeness 100.00% (complete)

Host UBA10281 sp900767815

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-044180
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 › vSUBFAM-00832 › vGENUS-01527 › vSUBGEN-23183 › vOTU-044180
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › Borkfalkiaceae › UBA10281 › UBA10281 sp900767815
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0031936
BioSample	NA
Genome length	40,945 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	68
CDS density	91.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0031936_1	PHROG	phrog_4433	NA	unknown function
UHGV-0031936_1	eggNOG-mapper	886882.PPSC2_p0048	regulation of DNA-templated transcription, elongation	NA
UHGV-0031936_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0031936_4	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0031936_4	UniRef90	UniRef90_A0A3C2DW28	HTH cro/C1-type domain-containing protein	NA
UHGV-0031936_4	eggNOG-mapper	1246448.ANAZ01000008_gene2507	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0031936_4	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0031936_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0031936_4	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0031936_6	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0031936_6	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0031936_6	UniRef90	UniRef90_A0A3C2DVT6	XRE family transcriptional regulator	NA
UHGV-0031936_6	eggNOG-mapper	717605.Theco_0932	Helix-turn-helix	NA
UHGV-0031936_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0031936_6	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0031936_6	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0031936_7	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0031936_7	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0031936_7	UniRef90	UniRef90_A0A3C2DVT6	XRE family transcriptional regulator	NA
UHGV-0031936_7	eggNOG-mapper	1005704.HMPREF9968_1459	Peptidase S24-like	NA
UHGV-0031936_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0031936_7	COG	COG2932	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	NA
UHGV-0031936_7	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0031936_10	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0031936_10	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0031936_10	UniRef90	UniRef90_A0A2Z4GUA9	Helix-turn-helix XRE-family like protein	NA
UHGV-0031936_10	eggNOG-mapper	558169.AGAV01000019_gene3220	transcriptional	NA
UHGV-0031936_10	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0031936_10	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0031936_10	Structural annotation	PF12844, NF041951, COG1396	NA	NA
UHGV-0031936_11	PHROG	phrog_4085	NA	unknown function
UHGV-0031936_11	UniRef90	UniRef90_A0A316SCS9	CopG family transcriptional regulator	NA
UHGV-0031936_11	eggNOG-mapper	1123511.KB905839_gene496	NA	NA
UHGV-0031936_11	Pfam	PF19807	NA	DUF6290
UHGV-0031936_11	Structural annotation	PF19807, NF041418, COG4710	NA	NA
UHGV-0031936_12	KOfam	K06218	relE, stbE; mRNA interferase RelE/StbE	NA
UHGV-0031936_12	PHROG	phrog_1213	RelE-like toxin	moron, auxiliary metabolic gene and host takeover
UHGV-0031936_12	UniRef90	UniRef90_A0A3D0XZ19	Type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA
UHGV-0031936_12	eggNOG-mapper	1095750.HMPREF9970_0882	ParE toxin of type II toxin-antitoxin system, parDE	NA
UHGV-0031936_12	Pfam	PF05016	ParE toxin of type II toxin-antitoxin system, parDE	ParE_toxin
UHGV-0031936_12	NCBIFam	TIGR02385.1	type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family	NA
UHGV-0031936_12	COG	COG2026	mRNA-degrading endonuclease RelE, toxin component of the RelBE toxin-antitoxin system	NA
UHGV-0031936_12	Structural annotation	PF05016, TIGR00053, COG2026	NA	NA
UHGV-0031936_14	UniRef90	UniRef90_A0A354UMM3	HTH cro/C1-type domain-containing protein	NA
UHGV-0031936_14	eggNOG-mapper	1410631.JHWZ01000001_gene1054	Putative restriction endonuclease	NA
UHGV-0031936_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0031936_14	COG	COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	NA
UHGV-0031936_14	Structural annotation	PF13560, MF_00535, NF041677, COG1396	NA	NA
UHGV-0031936_15	KOfam	K14059	int; integrase	NA
UHGV-0031936_15	PHROG	phrog_1	integrase	integration and excision
UHGV-0031936_15	UniRef90	UniRef90_A0A354UN09	Tyr recombinase domain-containing protein	NA
UHGV-0031936_15	eggNOG-mapper	469618.FVAG_01276	Belongs to the 'phage' integrase family	NA
UHGV-0031936_15	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0031936_15	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0031936_15	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0031936_18	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0031936_20	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0031936_21	PHROG	phrog_16490	NA	unknown function
UHGV-0031936_21	eggNOG-mapper	641112.ACOK01000103_gene525	NA	NA
UHGV-0031936_23	PHROG	phrog_21718	NA	unknown function
UHGV-0031936_28	Structural annotation	PF10651	NA	NA
UHGV-0031936_30	Structural annotation	PF04721, TIGR03711	NA	NA
UHGV-0031936_31	PHROG	phrog_38707	NA	unknown function
UHGV-0031936_31	eggNOG-mapper	552398.HMPREF0866_01593	tail collar domain protein	NA
UHGV-0031936_31	COG	COG4675	Phage tail collar domain	NA
UHGV-0031936_32	Structural annotation	PF14594, TIGR01646, COG4379	NA	NA
UHGV-0031936_36	Structural annotation	PF06199, PF08873, TIGR02126, COG5437	NA	NA
UHGV-0031936_37	Structural annotation	PF11114	NA	NA
UHGV-0031936_40	PHROG	phrog_422	major head protein	head and packaging
UHGV-0031936_40	UniRef90	UniRef90_A0A3C2DU69	Capsid protein	NA
UHGV-0031936_40	eggNOG-mapper	545697.HMPREF0216_02849	NA	NA
UHGV-0031936_40	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0031936_41	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0031936_41	UniRef90	UniRef90_UPI0001E39A27	phage scaffolding protein	NA
UHGV-0031936_41	eggNOG-mapper	1444310.JANV01000162_gene1175	Phage minor structural protein GP20	NA
UHGV-0031936_41	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0031936_41	Structural annotation	PF06810	NA	NA
UHGV-0031936_43	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0031936_43	eggNOG-mapper	1160721.RBI_II00541	NA	NA
UHGV-0031936_43	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0031936_43	COG	COG2369	NA	NA
UHGV-0031936_44	PHROG	phrog_533	portal protein	head and packaging
UHGV-0031936_44	UniRef90	UniRef90_A0A345BNV5	Putative portal protein	NA
UHGV-0031936_44	eggNOG-mapper	33035.JPJF01000093_gene2257	NA	NA
UHGV-0031936_44	Structural annotation	PF05133, MF_04120, TIGR01542, COG3567	NA	NA
UHGV-0031936_45	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0031936_45	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0031936_45	UniRef90	UniRef90_A0A345BNW5	Terminase large subunit	NA
UHGV-0031936_45	eggNOG-mapper	552396.HMPREF0863_01628	Phage terminase, large subunit, PBSX family	NA
UHGV-0031936_45	COG	COG1783	Phage terminase large subunit	NA
UHGV-0031936_46	Structural annotation	PF07141, NF012144	NA	NA
UHGV-0031936_47	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0031936_47	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0031936_47	UniRef90	UniRef90_A0A6J5KJQ5	DNA methylase N-4/N-6	NA
UHGV-0031936_47	eggNOG-mapper	1423758.BN55_01455	DNA methylase	NA
UHGV-0031936_47	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0031936_47	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0031936_47	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0031936_47	COG	COG0863	DNA modification methylase	NA
UHGV-0031936_47	Structural annotation	PF01555, PF02195, NF010253, TIGR00180, COG0863, COG5119	NA	NA
UHGV-0031936_48	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0031936_49	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0031936_49	eggNOG-mapper	1123302.KB904167_gene507	NA	NA
UHGV-0031936_51	Structural annotation	PF10842, MF_00436, NF011232, COG1923	NA	NA
UHGV-0031936_54	Structural annotation	PF18350, MF_01354, TIGR00405, COG2139	NA	NA
UHGV-0031936_55	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0031936_55	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0031936_55	UniRef90	UniRef90_R9KEA8	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0031936_55	eggNOG-mapper	397290.C810_05213	C-5 cytosine-specific DNA methylase	NA
UHGV-0031936_55	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0031936_55	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0031936_55	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0031936_55	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0031936_55	Structural annotation	PF00145, MF_02100, TIGR00675, COG0270	NA	NA
UHGV-0031936_61	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0031936_61	UniRef90	UniRef90_A0A3D4VRX2	NA	NA
UHGV-0031936_61	eggNOG-mapper	910314.HMPREF9220_1107	NA	NA
UHGV-0031936_61	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0031936_61	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0031936_61	Structural annotation	PF14297	NA	NA
UHGV-0031936_62	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0031936_62	UniRef90	UniRef90_UPI000C817A46	NA	NA
UHGV-0031936_62	eggNOG-mapper	445974.CLORAM_02947	NA	NA
UHGV-0031936_62	Pfam	PF06356	NA	DUF1064
UHGV-0031936_62	Structural annotation	PF06356, MF_04160, NF033179, COG1591	NA	NA
UHGV-0031936_63	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0031936_63	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0031936_63	UniRef90	UniRef90_R7FWV6	Single-stranded DNA-binding protein	NA
UHGV-0031936_63	eggNOG-mapper	264732.Moth_0129	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0031936_63	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0031936_63	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0031936_63	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0031936_63	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0031936_63	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0031936_66	PHROG	phrog_1366	NA	unknown function
UHGV-0031936_66	UniRef90	UniRef90_A0A850RF01	ATP-binding protein	NA
UHGV-0031936_66	eggNOG-mapper	1123288.SOV_1c03840	AAA domain	NA
UHGV-0031936_66	Pfam	PF13479	AAA domain	AAA_24
UHGV-0031936_66	COG	COG0468	RecA/RadA recombinase	NA
UHGV-0031936_66	Structural annotation	PF13479, MF_00350, TIGR01618, COG0468	NA	NA
UHGV-0031936_68	PHROG	phrog_27197	NA	unknown function
UHGV-0031936_68	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0031936_68	Structural annotation	NF007410	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0031936	Yes	40,945 bps	41.80%	100.00%	0.9628