vOTU-044437

Overview

No. of genomes 22

Genome length 32,355 bps

Completeness 100.00% (complete)

Host CAG-508

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-044437
Number of genomes	22
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00162 › vSUBFAM-05254 › vGENUS-10977 › vSUBGEN-15109 › vOTU-044437
Host taxonomy	Bacteria › Firmicutes A › Clostridia › TANB77 › CAG-508
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0035256
BioSample	SAMEA4969121
Genome length	32,355 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	50
CDS density	92.66%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0035256_2	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0035256_2	UniRef90	UniRef90_A0A1Q6L450	HTH cro/C1-type domain-containing protein	NA
UHGV-0035256_2	eggNOG-mapper	1121289.JHVL01000002_gene2467	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0035256_2	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0035256_2	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0035256_3	KOfam	K08737	MSH6; DNA mismatch repair protein MSH6	NA
UHGV-0035256_3	UniRef90	UniRef90_R7F9J1	DNA mismatch repair protein MutS	NA
UHGV-0035256_3	Pfam	PF01624	MutS domain I	MutS_I
UHGV-0035256_3	COG	COG0249	DNA mismatch repair ATPase MutS	NA
UHGV-0035256_3	Structural annotation	PF01624, NF006536	NA	NA
UHGV-0035256_4	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0035256_4	PHROG	phrog_7698	endolysin	lysis
UHGV-0035256_4	UniRef90	UniRef90_A0A7D7GJS2	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0035256_4	eggNOG-mapper	1123315.AUIP01000001_gene1438	Cpl-7 lysozyme C-terminal domain protein	NA
UHGV-0035256_4	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0035256_4	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0035256_4	COG	COG1388	LysM repeat	NA
UHGV-0035256_6	PHROG	phrog_1863	NA	unknown function
UHGV-0035256_6	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-0035256_7	PHROG	phrog_4912	tail fiber assembly	tail
UHGV-0035256_7	UniRef90	UniRef90_A0A843GPS8	Phage tail assembly chaperone	NA
UHGV-0035256_7	Pfam	PF16778	Phage tail assembly chaperone protein	Phage_tail_APC
UHGV-0035256_7	Structural annotation	PF16778	NA	NA
UHGV-0035256_8	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0035256_8	UniRef90	UniRef90_A0A354MD61	Reverse transcriptase domain-containing protein	NA
UHGV-0035256_8	eggNOG-mapper	755164.D6PSR5_9CAUD	RNA-directed DNA polymerase activity	NA
UHGV-0035256_8	Structural annotation	NF038233	NA	NA
UHGV-0035256_9	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0035256_9	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0035256_9	UniRef90	UniRef90_R6Z282	Putative reverse transcriptase	NA
UHGV-0035256_9	eggNOG-mapper	755164.D6PSR5_9CAUD	RNA-directed DNA polymerase activity	NA
UHGV-0035256_9	PADLOC	drt-UG17	DRT	DRT
UHGV-0035256_10	PHROG	phrog_5302	tail protein	tail
UHGV-0035256_10	UniRef90	UniRef90_UPI001951D0C2	fibronectin type III domain-containing protein	NA
UHGV-0035256_10	eggNOG-mapper	411470.RUMGNA_00248	Phage tail-collar fibre protein	NA
UHGV-0035256_10	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0035256_11	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0035256_11	UniRef90	UniRef90_UPI0006925FC0	phage tail protein	NA
UHGV-0035256_11	eggNOG-mapper	1408823.AXUS01000025_gene2634	Phage minor structural protein	NA
UHGV-0035256_11	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0035256_11	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0035256_11	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0035256_11	COG	COG4926	Phage-related protein	NA
UHGV-0035256_11	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0035256_12	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0035256_12	UniRef90	UniRef90_A0A358PXF7	Phage tail protein	NA
UHGV-0035256_12	eggNOG-mapper	1487921.DP68_11370	tail component	NA
UHGV-0035256_12	COG	COG4722	Phage-related protein YomH	NA
UHGV-0035256_12	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0035256_13	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0035256_13	UniRef90	UniRef90_R6TR60	Phage tail tape measure protein TP901 family	NA
UHGV-0035256_13	eggNOG-mapper	768704.Desmer_4455	tail tape measure protein TP901	NA
UHGV-0035256_13	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0035256_13	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0035256_13	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0035256_15	eggNOG-mapper	411465.PEPMIC_00742	NA	NA
UHGV-0035256_16	PHROG	phrog_885	major tail protein	tail
UHGV-0035256_16	UniRef90	UniRef90_A0A7C6X6S5	Ig-like domain-containing protein	NA
UHGV-0035256_16	eggNOG-mapper	768704.Desmer_4457	NA	NA
UHGV-0035256_16	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-0035256_17	PHROG	phrog_957	head protein	head and packaging
UHGV-0035256_17	Structural annotation	PF11367, COG4722	NA	NA
UHGV-0035256_18	UniRef90	UniRef90_UPI001A9B6FBF	HK97 gp10 family phage protein	NA
UHGV-0035256_18	eggNOG-mapper	642492.Clole_0747	NA	NA
UHGV-0035256_18	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0035256_18	Structural annotation	TIGR01725	NA	NA
UHGV-0035256_19	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0035256_19	UniRef90	UniRef90_A0A3D9HZ89	SPP1 family predicted phage head-tail adaptor	NA
UHGV-0035256_19	eggNOG-mapper	315730.BcerKBAB4_3425	Phage head-tail joining protein	NA
UHGV-0035256_19	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0035256_19	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0035256_19	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0035256_20	PHROG	phrog_5223	neck protein	connector
UHGV-0035256_20	UniRef90	UniRef90_UPI000F062078	head-tail connector protein	NA
UHGV-0035256_22	PHROG	phrog_10	major head protein	head and packaging
UHGV-0035256_22	UniRef90	UniRef90_A0A2Z3U015	Phage major capsid protein	NA
UHGV-0035256_22	eggNOG-mapper	642492.Clole_1858	phage major capsid protein, HK97 family	NA
UHGV-0035256_22	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0035256_22	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0035256_22	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0035256_22	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0035256_23	KOfam	K06904	NA	NA
UHGV-0035256_23	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0035256_23	UniRef90	UniRef90_A0A0U1L0V7	Phage head maturation protease	NA
UHGV-0035256_23	eggNOG-mapper	1123288.SOV_2c03620	Caudovirus prohead serine protease	NA
UHGV-0035256_23	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0035256_23	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0035256_23	COG	COG3740	Phage head maturation protease	NA
UHGV-0035256_23	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0035256_24	PHROG	phrog_12	portal protein	head and packaging
UHGV-0035256_24	UniRef90	UniRef90_UPI0009FB2E5E	phage portal protein	NA
UHGV-0035256_24	eggNOG-mapper	293826.Amet_2412	Portal protein	NA
UHGV-0035256_24	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0035256_24	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0035256_24	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0035256_25	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0035256_25	UniRef90	UniRef90_A0A2N1Q9V0	Terminase large subunit	NA
UHGV-0035256_25	eggNOG-mapper	441768.ACL_0608	Phage Terminase	NA
UHGV-0035256_25	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0035256_25	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0035256_25	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0035256_25	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0035256_26	PHROG	phrog_1066	NA	unknown function
UHGV-0035256_26	UniRef90	UniRef90_A0A841KX40	Regulator of replication initiation timing	NA
UHGV-0035256_26	eggNOG-mapper	293826.Amet_2410	NA	NA
UHGV-0035256_26	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0035256_27	PHROG	phrog_4581	terminase small subunit	head and packaging
UHGV-0035256_27	UniRef90	UniRef90_UPI001E535C34	HNH endonuclease	NA
UHGV-0035256_27	eggNOG-mapper	1211817.CCAT010000007_gene1042	HNH endonuclease	NA
UHGV-0035256_27	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0035256_27	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0035256_27	Structural annotation	PF13671, MF_03171, NF005251, NF008448, COG4639	NA	NA
UHGV-0035256_28	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0035256_28	UniRef90	UniRef90_UPI00189C1E69	Xaa-His dipeptidase	NA
UHGV-0035256_28	eggNOG-mapper	457396.CSBG_01043	transposase activity	NA
UHGV-0035256_28	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0035256_28	Structural annotation	PF07141	NA	NA
UHGV-0035256_30	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0035256_30	UniRef90	UniRef90_UPI001C9AEC20	RNA polymerase subunit sigma-24	NA
UHGV-0035256_30	eggNOG-mapper	1291050.JAGE01000001_gene1333	NA	NA
UHGV-0035256_30	Structural annotation	PF02996	NA	NA
UHGV-0035256_33	KOfam	K01520	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	NA
UHGV-0035256_33	PHROG	phrog_135	dUTPase	DNA, RNA and nucleotide metabolism
UHGV-0035256_33	UniRef90	UniRef90_A0A3B9ZB71	dUTP diphosphatase	NA
UHGV-0035256_33	eggNOG-mapper	246194.CHY_0300	dUTP diphosphatase	NA
UHGV-0035256_33	Pfam	PF00692	dUTPase	dUTPase
UHGV-0035256_33	COG	COG0756	dUTP pyrophosphatase (dUTPase)	NA
UHGV-0035256_33	Structural annotation	PF00692, MF_00116, NF010561, COG0756	NA	NA
UHGV-0035256_34	PHROG	phrog_3392	NA	unknown function
UHGV-0035256_34	UniRef90	UniRef90_A8AT45	Gp21	NA
UHGV-0035256_34	eggNOG-mapper	1126950.G9J1S7_9CAUD	NA	NA
UHGV-0035256_38	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0035256_38	UniRef90	UniRef90_UPI00195E30EE	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0035256_38	eggNOG-mapper	469617.FUAG_00816	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0035256_38	PADLOC	SspD_00001	SspD	SSP
UHGV-0035256_38	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0035256_38	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0035256_38	Structural annotation	PF01507, MF_00064, NF006327, COG0175	NA	NA
UHGV-0035256_39	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0035256_39	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0035256_39	UniRef90	UniRef90_A0A7J2R9P4	DNA cytosine methyltransferase	NA
UHGV-0035256_39	eggNOG-mapper	742767.HMPREF9456_03404	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0035256_39	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0035256_39	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0035256_39	Structural annotation	PF01189, MF_02057, NF001556, COG4123	NA	NA
UHGV-0035256_41	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0035256_41	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0035256_41	UniRef90	UniRef90_R6H754	NA	NA
UHGV-0035256_41	eggNOG-mapper	262071.A3QSG6_9CAUD	Endodeoxyribonuclease RusA	NA
UHGV-0035256_41	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0035256_41	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0035256_42	PHROG	phrog_421	NA	unknown function
UHGV-0035256_42	UniRef90	UniRef90_A0A172JHR5	NA	NA
UHGV-0035256_42	eggNOG-mapper	1121871.AUAT01000004_gene1121	NA	NA
UHGV-0035256_42	Pfam	PF10979	NA	DUF2786
UHGV-0035256_42	COG	COG1451	UTP pyrophosphatase, metal-dependent hydrolase family	NA
UHGV-0035256_42	Structural annotation	PF10979	NA	NA
UHGV-0035256_44	PHROG	phrog_19658	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0035256_44	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0035256_44	Structural annotation	PF04492, TIGR01610, COG5529	NA	NA
UHGV-0035256_45	UniRef90	UniRef90_A0A354MDC3	LysM domain-containing protein	NA
UHGV-0035256_45	eggNOG-mapper	509191.AEDB02000003_gene1050	Lysin motif	NA
UHGV-0035256_45	Pfam	PF01476	LysM domain	LysM
UHGV-0035256_45	COG	COG1388	LysM repeat	NA
UHGV-0035256_45	Structural annotation	PF01476, MF_02014, NF010723, COG1388	NA	NA
UHGV-0035256_48	Structural annotation	PF05339, NF007271, COG3655	NA	NA
UHGV-0035256_49	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0035256_49	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0035256_49	UniRef90	UniRef90_UPI00188A6E6E	XRE family transcriptional regulator	NA
UHGV-0035256_49	eggNOG-mapper	1134413.ANNK01000054_gene2207	Peptidase S24-like	NA
UHGV-0035256_49	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0035256_49	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0035256_49	Structural annotation	PF00717, PF15943, MF_00015, TIGR00498, COG2932	NA	NA
UHGV-0035256_50	KOfam	K14059	int; integrase	NA
UHGV-0035256_50	PHROG	phrog_1	integrase	integration and excision
UHGV-0035256_50	UniRef90	UniRef90_R5LCS8	Phage integrase family site specific recombinase	NA
UHGV-0035256_50	eggNOG-mapper	1033738.CAEP01000017_gene3738	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0035256_50	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0035256_50	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0035256_50	Structural annotation	PF00589, PF13102, MF_01808, TIGR02224, COG4974	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0035256	Yes	32,355 bps	28.99%	100.00%	0.9722
UHGV-0040712	No	35,748 bps	28.88%	98.93%	0.9704
UHGV-0071983	No	32,930 bps	29.04%	97.06%	0.9730
UHGV-1426428	No	32,930 bps	29.04%	96.74%	0.9730
UHGV-0188830	No	31,891 bps	29.21%	94.00%	0.9740
UHGV-0108492	No	31,588 bps	29.18%	92.40%	0.9716
UHGV-1442770	No	32,211 bps	29.08%	88.98%	0.9741
UHGV-1478509	No	31,885 bps	29.11%	88.23%	0.9728
UHGV-1392045	No	31,587 bps	29.18%	87.23%	0.9725
UHGV-2031363	No	30,314 bps	29.36%	83.64%	0.9707
UHGV-1387726	No	30,172 bps	29.45%	83.12%	0.9736
UHGV-1390854	No	30,172 bps	29.45%	83.12%	0.9736
UHGV-1488777	No	25,418 bps	29.90%	74.62%	0.9789
UHGV-1379285	No	22,280 bps	29.75%	61.23%	0.9766
UHGV-1345248	No	19,763 bps	30.19%	54.14%	0.9796
UHGV-1584935	No	18,223 bps	30.41%	49.63%	0.9783
UHGV-1813651	No	14,902 bps	29.81%	41.06%	0.9747
UHGV-1631792	No	13,210 bps	29.85%	39.51%	0.9762
UHGV-1590463	No	11,868 bps	30.17%	32.86%	0.9794
UHGV-1613566	No	10,507 bps	30.08%	31.99%	0.9779
UHGV-1653935	No	10,045 bps	30.15%	31.38%	0.9777
UHGV-0264828	No	11,348 bps	28.82%	29.31%	0.9601