vOTU-045194

Overview

No. of genomes 18

Genome length 40,344 bps

Completeness 100.00% (complete)

Host Oscillospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-045194
Number of genomes	18
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-01179 › vGENUS-16181 › vSUBGEN-28861 › vOTU-045194
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1363703
BioSample	SAMEA2737793
Genome length	40,344 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	72
CDS density	87.96%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-1363703_1	PHROG	phrog_27197	NA	unknown function
UHGV-1363703_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1363703_2	eggNOG-mapper	1033743.CAES01000078_gene3736	Flagellar Assembly Protein A	NA
UHGV-1363703_2	COG	COG1315	Flagellar assembly protein FapA, interacts with EIIAGlc	NA
UHGV-1363703_2	Structural annotation	PF03961	NA	NA
UHGV-1363703_5	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-1363703_5	UniRef90	UniRef90_A0A1C6J8G0	ERF superfamily	NA
UHGV-1363703_5	eggNOG-mapper	1268072.PSAB_05935	ERF superfamily	NA
UHGV-1363703_5	Pfam	PF04404	ERF superfamily	ERF
UHGV-1363703_5	Structural annotation	PF04404, COG4712	NA	NA
UHGV-1363703_6	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-1363703_6	UniRef90	UniRef90_UPI001F3F3E5C	recombination protein NinB	NA
UHGV-1363703_6	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-1363703_6	Structural annotation	PF05772, NF007281	NA	NA
UHGV-1363703_7	PHROG	phrog_7566	NA	unknown function
UHGV-1363703_7	eggNOG-mapper	1280698.AUJS01000007_gene1020	NA	NA
UHGV-1363703_8	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-1363703_8	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-1363703_8	UniRef90	UniRef90_A0A0S2W7E3	Single-stranded DNA-binding protein	NA
UHGV-1363703_8	eggNOG-mapper	1297617.JPJD01000076_gene1093	Single-strand binding protein family	NA
UHGV-1363703_8	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-1363703_8	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-1363703_8	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-1363703_8	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-1363703_8	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-1363703_9	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-1363703_9	UniRef90	UniRef90_UPI00095201A6	NA	NA
UHGV-1363703_9	eggNOG-mapper	1235790.C805_00030	NA	NA
UHGV-1363703_9	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-1363703_9	COG	COG3935	DNA replication protein DnaD	NA
UHGV-1363703_10	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-1363703_10	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-1363703_10	UniRef90	UniRef90_UPI0009529D7E	AAA family ATPase	NA
UHGV-1363703_10	eggNOG-mapper	742738.HMPREF9460_00852	Participates in initiation and elongation during chromosome replication	NA
UHGV-1363703_10	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-1363703_10	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-1363703_10	COG	COG0305	Replicative DNA helicase	NA
UHGV-1363703_10	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-1363703_12	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-1363703_12	PHROG	phrog_4632	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-1363703_12	UniRef90	UniRef90_A0A7X8IB41	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-1363703_12	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-1363703_14	PHROG	phrog_9298	radical SAM domain protein	other
UHGV-1363703_14	UniRef90	UniRef90_UPI001C3BADA7	Radical SAM protein	NA
UHGV-1363703_14	eggNOG-mapper	1235797.C816_00412	NA	NA
UHGV-1363703_14	COG	COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	NA
UHGV-1363703_14	Structural annotation	MF_01865, NF010916, COG0621	NA	NA
UHGV-1363703_15	PHROG	phrog_25732	NA	unknown function
UHGV-1363703_15	UniRef90	UniRef90_UPI001898061F	NA	NA
UHGV-1363703_19	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-1363703_19	UniRef90	UniRef90_A0A1C6J908	NA	NA
UHGV-1363703_19	eggNOG-mapper	551790.B5BTW0_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-1363703_19	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-1363703_20	PHROG	phrog_924	NA	unknown function
UHGV-1363703_20	UniRef90	UniRef90_UPI00189DCC57	NA	NA
UHGV-1363703_20	Pfam	PF04448	NA	DUF551
UHGV-1363703_20	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-1363703_20	Structural annotation	PF04448	NA	NA
UHGV-1363703_21	UniRef90	UniRef90_A0A2U1BEG9	Helix-turn-helix protein	NA
UHGV-1363703_21	eggNOG-mapper	742738.HMPREF9460_04059	Helix-turn-helix XRE-family like proteins	NA
UHGV-1363703_21	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1363703_21	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1363703_21	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1363703_25	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-1363703_25	UniRef90	UniRef90_A0A1C6J963	Helix-turn-helix	NA
UHGV-1363703_25	eggNOG-mapper	1226322.HMPREF1545_00039	sequence-specific DNA binding	NA
UHGV-1363703_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1363703_25	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1363703_25	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-1363703_26	UniRef90	UniRef90_UPI0009523D83	helix-turn-helix domain containing protein	NA
UHGV-1363703_26	eggNOG-mapper	1226322.HMPREF1545_00042	NA	NA
UHGV-1363703_26	Structural annotation	PF13542	NA	NA
UHGV-1363703_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-1363703_27	PHROG	phrog_10250	NA	unknown function
UHGV-1363703_27	UniRef90	UniRef90_A0A3D3Y0N9	PBSX family phage terminase large subunit	NA
UHGV-1363703_27	eggNOG-mapper	1226322.HMPREF1545_00043	Phage terminase large subunit	NA
UHGV-1363703_27	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-1363703_27	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-1363703_27	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-1363703_27	COG	COG1783	Phage terminase large subunit	NA
UHGV-1363703_27	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-1363703_28	PHROG	phrog_64	portal protein	head and packaging
UHGV-1363703_28	UniRef90	UniRef90_A0A285PU84	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1363703_28	eggNOG-mapper	1408437.JNJN01000045_gene595	Phage portal protein, SPP1 Gp6-like	NA
UHGV-1363703_28	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-1363703_28	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-1363703_29	PHROG	phrog_2468	head morphogenesis	head and packaging
UHGV-1363703_29	UniRef90	UniRef90_A0A4D7AUA1	Phage head morphogenesis protein	NA
UHGV-1363703_29	eggNOG-mapper	1111121.HMPREF1247_0797	cell adhesion	NA
UHGV-1363703_29	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-1363703_29	COG	COG2369	NA	NA
UHGV-1363703_29	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-1363703_30	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-1363703_30	UniRef90	UniRef90_UPI0018AA0B5A	HK97 gp10 family phage protein	NA
UHGV-1363703_30	eggNOG-mapper	1280685.AUKC01000004_gene1630	NA	NA
UHGV-1363703_30	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-1363703_30	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-1363703_30	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-1363703_31	KOfam	K18843	hicB; antitoxin HicB	NA
UHGV-1363703_31	PHROG	phrog_497	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UHGV-1363703_31	UniRef90	UniRef90_UPI001D0756FD	type II toxin-antitoxin system HicB family antitoxin	NA
UHGV-1363703_31	eggNOG-mapper	1042156.CXIVA_01880	Toxin-antitoxin system, antitoxin component, HicB family	NA
UHGV-1363703_31	Pfam	PF15919	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
UHGV-1363703_31	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-1363703_31	Structural annotation	PF15919, COG1598	NA	NA
UHGV-1363703_32	KOfam	K07339	hicA; mRNA interferase HicA [EC:3.1.-.-]	NA
UHGV-1363703_32	UniRef90	UniRef90_A0A173T1A3	YcfA-like protein	NA
UHGV-1363703_32	eggNOG-mapper	397287.C807_02203	NA	NA
UHGV-1363703_32	Structural annotation	PF07927, COG1724	NA	NA
UHGV-1363703_33	Structural annotation	PF06810	NA	NA
UHGV-1363703_34	PHROG	phrog_544	major head protein	head and packaging
UHGV-1363703_34	UniRef90	UniRef90_A0A1C6B5R0	S-l_SbsC_C domain-containing protein	NA
UHGV-1363703_34	eggNOG-mapper	476272.RUMHYD_01776	NA	NA
UHGV-1363703_34	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-1363703_36	PHROG	phrog_17977	NA	unknown function
UHGV-1363703_36	UniRef90	UniRef90_UPI00141211AB	head-tail adaptor protein	NA
UHGV-1363703_36	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-1363703_37	PHROG	phrog_1233	NA	unknown function
UHGV-1363703_37	eggNOG-mapper	936375.HMPREF1152_1074	NA	NA
UHGV-1363703_37	Pfam	PF04450	Peptidase of plants and bacteria	BSP
UHGV-1363703_38	PHROG	phrog_17405	head protein	head and packaging
UHGV-1363703_38	Structural annotation	PF11367	NA	NA
UHGV-1363703_39	PHROG	phrog_885	major tail protein	tail
UHGV-1363703_39	UniRef90	UniRef90_A0A843J9F0	Ig-like domain-containing protein	NA
UHGV-1363703_39	eggNOG-mapper	1504822.CCNO01000012_gene492	NA	NA
UHGV-1363703_39	Structural annotation	PF06488, TIGR01603, COG5437	NA	NA
UHGV-1363703_40	UniRef90	UniRef90_A0A285PXU7	Consensus disorder prediction	NA
UHGV-1363703_42	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-1363703_42	eggNOG-mapper	1499683.CCFF01000017_gene2565	tape measure	NA
UHGV-1363703_42	COG	COG1511	NA	NA
UHGV-1363703_44	PHROG	phrog_32744	NA	unknown function
UHGV-1363703_44	eggNOG-mapper	1120998.AUFC01000030_gene2247	NA	NA
UHGV-1363703_44	Structural annotation	PF14594, PF21722, NF033848, COG4379	NA	NA
UHGV-1363703_45	eggNOG-mapper	2754.EH55_00535	NA	NA
UHGV-1363703_45	Structural annotation	PF03426, NF033675	NA	NA
UHGV-1363703_46	PHROG	phrog_24451	NA	unknown function
UHGV-1363703_46	eggNOG-mapper	1408437.JNJN01000040_gene189	NA	NA
UHGV-1363703_47	Structural annotation	PF09693, TIGR01669	NA	NA
UHGV-1363703_49	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-1363703_49	PHROG	phrog_18955	NA	unknown function
UHGV-1363703_49	UniRef90	UniRef90_A0A1C6JAB9	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1363703_49	eggNOG-mapper	1121344.JHZO01000003_gene744	Ami_3	NA
UHGV-1363703_49	Pfam	PF09992	Phosphodiester glycosidase	NAGPA
UHGV-1363703_49	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-1363703_49	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-1363703_49	Structural annotation	PF01520, PF09992, MF_00417, TIGR02883, COG0860, COG4632	NA	NA
UHGV-1363703_50	PHROG	phrog_1129	holin	lysis
UHGV-1363703_50	UniRef90	UniRef90_A0A3D4QXE9	Enolase	NA
UHGV-1363703_50	eggNOG-mapper	1226322.HMPREF1545_00069	Phage holin family Hol44, in holin superfamily V	NA
UHGV-1363703_50	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-1363703_50	Structural annotation	PF06946	NA	NA
UHGV-1363703_51	eggNOG-mapper	97138.C820_00248	NA	NA
UHGV-1363703_52	UniRef90	UniRef90_A0A1C6JAI6	RNA polymerase sigma factor, sigma-70 family	NA
UHGV-1363703_52	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-1363703_54	PHROG	phrog_3754	NA	unknown function
UHGV-1363703_54	eggNOG-mapper	476272.RUMHYD_01764	NA	NA
UHGV-1363703_56	PHROG	phrog_21718	NA	unknown function
UHGV-1363703_57	PHROG	phrog_22984	NA	unknown function
UHGV-1363703_58	PHROG	phrog_16490	NA	unknown function
UHGV-1363703_58	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-1363703_59	PHROG	phrog_20016	NA	unknown function
UHGV-1363703_59	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-1363703_59	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-1363703_59	Structural annotation	PF18573, NF033147	NA	NA
UHGV-1363703_61	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-1363703_62	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-1363703_62	PHROG	phrog_95	integrase	integration and excision
UHGV-1363703_62	UniRef90	UniRef90_A0A1C6HT72	Resolvase, N terminal domain	NA
UHGV-1363703_62	eggNOG-mapper	903814.ELI_4654	Resolvase, N terminal domain	NA
UHGV-1363703_62	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-1363703_62	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-1363703_62	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-1363703_62	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-1363703_63	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1363703_63	Structural annotation	PF01381, MF_02017, TIGR03070, COG3655	NA	NA
UHGV-1363703_64	UniRef90	UniRef90_UPI001956EF77	stalk domain-containing protein	NA
UHGV-1363703_64	eggNOG-mapper	1226322.HMPREF1545_01476	Copper amine oxidase N-terminal domain	NA
UHGV-1363703_64	Pfam	PF07833	Copper amine oxidase N-terminal domain	Cu_amine_oxidN1
UHGV-1363703_66	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-1363703_66	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-1363703_66	UniRef90	UniRef90_UPI00195DE29C	helix-turn-helix domain-containing protein	NA
UHGV-1363703_66	eggNOG-mapper	411471.SUBVAR_05818	sequence-specific DNA binding	NA
UHGV-1363703_66	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-1363703_66	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-1363703_66	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-1363703_71	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-1363703_71	PHROG	phrog_32437	NA	unknown function
UHGV-1363703_71	UniRef90	UniRef90_A0A1C6J857	Transglycosylase SLT domain	NA
UHGV-1363703_71	eggNOG-mapper	1121413.JMKT01000012_gene610	PFAM Lytic transglycosylase catalytic	NA
UHGV-1363703_71	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-1363703_71	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-1363703_71	Structural annotation	PF01464, MF_01616, NF011856, COG0741	NA	NA
UHGV-1363703_72	PHROG	phrog_4433	NA	unknown function
UHGV-1363703_72	UniRef90	UniRef90_UPI00045B9709	collagen-like protein	NA
UHGV-1363703_72	eggNOG-mapper	439375.Oant_2324	regulation of DNA-templated transcription, elongation	NA
UHGV-1363703_72	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-1363703_72	Structural annotation	NF000318	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-1363703	Yes	40,344 bps	52.60%	100.00%	0.9798
UHGV-0082834	No	40,344 bps	52.60%	100.00%	0.9798
UHGV-0110501	No	41,163 bps	52.31%	95.20%	0.9811
UHGV-1386502	No	40,542 bps	52.66%	93.75%	0.9801
UHGV-1391204	No	40,359 bps	52.40%	93.32%	0.9811
UHGV-1504111	No	39,802 bps	52.51%	92.07%	0.9805
UHGV-2015970	No	38,912 bps	52.23%	89.96%	0.9780
UHGV-1490589	No	36,724 bps	53.00%	84.91%	0.9807
UHGV-1505044	No	32,661 bps	52.82%	75.47%	0.9797
UHGV-1479975	No	31,811 bps	53.50%	73.52%	0.9816
UHGV-1691831	No	18,878 bps	52.67%	46.94%	0.9825
UHGV-1663956	No	18,393 bps	52.35%	45.74%	0.9833
UHGV-1805121	No	16,026 bps	52.85%	39.86%	0.9830
UHGV-1686423	No	14,523 bps	53.17%	36.18%	0.9746
UHGV-1665828	No	14,244 bps	53.28%	35.46%	0.9826
UHGV-1677704	No	12,641 bps	52.80%	31.47%	0.9827
UHGV-1792452	No	11,184 bps	52.75%	27.87%	0.9832
UHGV-1715674	No	10,531 bps	49.55%	24.39%	0.9738