vOTU-045823

Overview

vOTU representative UHGV-0120830

No. of genomes 13

Genome length 43,492 bps

Completeness 100.00% (complete)

Host Acutalibacteraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-045823
Number of genomes	13
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00136 › vGENUS-02234 › vSUBGEN-36299 › vOTU-045823
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0120830
BioSample	SAMEA103958167
Genome length	43,492 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	63
CDS density	93.17%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0120830_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0120830_1	PHROG	phrog_95	integrase	integration and excision
UHGV-0120830_1	UniRef90	UniRef90_A0A1C6L066	Recombinase	NA
UHGV-0120830_1	eggNOG-mapper	445972.ANACOL_03320	NA	NA
UHGV-0120830_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0120830_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-0120830_1	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0120830_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0120830_1	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0120830_2	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0120830_2	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0120830_2	UniRef90	UniRef90_A0A1C6L0N4	HTH cro/C1-type domain-containing protein	NA
UHGV-0120830_2	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0120830_2	Structural annotation	PF08667, NF041951, COG3655	NA	NA
UHGV-0120830_5	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-0120830_5	PHROG	phrog_19349	NA	unknown function
UHGV-0120830_5	UniRef90	UniRef90_A0A1C6L0M2	Transglycosylase SLT domain	NA
UHGV-0120830_5	eggNOG-mapper	742740.HMPREF9474_02375	lytic transglycosylase activity	NA
UHGV-0120830_5	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0120830_5	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0120830_5	Structural annotation	PF01464, MF_01616, NF011856, COG0741	NA	NA
UHGV-0120830_7	UniRef90	UniRef90_D7GXC2	Archaeal holliday junction resolvase (Hjc)	NA
UHGV-0120830_7	eggNOG-mapper	1232453.BAIF02000010_gene3342	Recombination protein U	NA
UHGV-0120830_7	Pfam	PF01870	Archaeal holliday junction resolvase (hjc)	Hjc
UHGV-0120830_7	Structural annotation	PF03838, MF_01490, NF002581, COG1591	NA	NA
UHGV-0120830_8	KOfam	K18959	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	NA
UHGV-0120830_8	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0120830_8	UniRef90	UniRef90_A0A1C6L0A3	Predicted HKD family nuclease	NA
UHGV-0120830_8	eggNOG-mapper	1449050.JNLE01000003_gene3908	Type III restriction protein res subunit	NA
UHGV-0120830_8	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0120830_8	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0120830_8	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0120830_8	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0120830_8	Structural annotation	PF04851, PF16203, MF_01489, TIGR00603, COG1061	NA	NA
UHGV-0120830_9	KOfam	K02319	pol; DNA polymerase, archaea type [EC:2.7.7.7]	NA
UHGV-0120830_9	PHROG	phrog_1252	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0120830_9	UniRef90	UniRef90_A0A1C6L082	DNA polymerase II	NA
UHGV-0120830_9	eggNOG-mapper	1121866.AUGK01000003_gene1403	DNA replication proofreading	NA
UHGV-0120830_9	Pfam	PF04404	ERF superfamily	ERF
UHGV-0120830_9	COG	COG0417	DNA polymerase B elongation subunit	NA
UHGV-0120830_9	Structural annotation	PF04404, PF08490, MF_04100, TIGR00592, COG0417	NA	NA
UHGV-0120830_10	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0120830_10	UniRef90	UniRef90_A0A1C6L0E5	Putative phage-type endonuclease	NA
UHGV-0120830_10	eggNOG-mapper	1219626.HMPREF1639_07320	YqaJ viral recombinase family	NA
UHGV-0120830_10	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0120830_10	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0120830_10	Structural annotation	PF09588, TIGR03033, COG5377	NA	NA
UHGV-0120830_12	Structural annotation	PF05037	NA	NA
UHGV-0120830_13	PHROG	phrog_236	nucleotide kinase	other
UHGV-0120830_13	UniRef90	UniRef90_A0A1C6L091	NA	NA
UHGV-0120830_13	eggNOG-mapper	1123263.AUKY01000015_gene1590	NA	NA
UHGV-0120830_13	Pfam	PF11753	NA	DUF3310
UHGV-0120830_13	Structural annotation	PF11753	NA	NA
UHGV-0120830_14	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-0120830_14	PHROG	phrog_5889	NA	unknown function
UHGV-0120830_14	UniRef90	UniRef90_A0A1C6L075	Predicted HD-superfamily hydrolase	NA
UHGV-0120830_14	eggNOG-mapper	1219626.HMPREF1639_07345	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-0120830_14	Pfam	PF01966	HD domain	HD
UHGV-0120830_14	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0120830_14	Structural annotation	PF21447, MF_01427, NF010007, COG3481	NA	NA
UHGV-0120830_17	Structural annotation	PF06530, TIGR01636	NA	NA
UHGV-0120830_18	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0120830_18	UniRef90	UniRef90_A0A1C0AE21	DNA primase	NA
UHGV-0120830_18	eggNOG-mapper	1121866.AUGK01000003_gene1409	Phage plasmid primase, P4 family domain protein	NA
UHGV-0120830_18	Pfam	PF08708	Primase C terminal 1 (PriCT-1)	PriCT_1
UHGV-0120830_18	COG	COG4983	Primase-polymerase (Primpol) domain protein	NA
UHGV-0120830_18	Structural annotation	PF08708, PF09250, COG4983	NA	NA
UHGV-0120830_19	PHROG	phrog_21980	NA	unknown function
UHGV-0120830_19	UniRef90	UniRef90_A0A1C6L0C5	NA	NA
UHGV-0120830_19	eggNOG-mapper	1410650.JHWL01000003_gene2843	NA	NA
UHGV-0120830_19	Pfam	PF19789	NA	DUF6273
UHGV-0120830_19	Structural annotation	PF19789	NA	NA
UHGV-0120830_21	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0120830_21	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0120830_21	UniRef90	UniRef90_A0A1C6L030	mRNA interferase EndoA	NA
UHGV-0120830_21	eggNOG-mapper	411461.DORFOR_01157	NA	NA
UHGV-0120830_21	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0120830_21	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0120830_21	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0120830_22	PHROG	phrog_1156	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0120830_22	UniRef90	UniRef90_D7GNU9	Phage/plasmid primase, P4 family, C-terminal domain	NA
UHGV-0120830_22	eggNOG-mapper	649747.HMPREF0083_00553	Phage plasmid primase, P4 family	NA
UHGV-0120830_22	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0120830_22	Pfam	PF19263	NA	DUF5906
UHGV-0120830_22	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0120830_22	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0120830_22	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0120830_22	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF005477, COG3378	NA	NA
UHGV-0120830_23	eggNOG-mapper	742740.HMPREF9474_02291	phosphatase activity	NA
UHGV-0120830_23	COG	COG0561	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	NA
UHGV-0120830_25	eggNOG-mapper	457424.BFAG_02413	NA	NA
UHGV-0120830_26	PHROG	phrog_13414	NA	unknown function
UHGV-0120830_27	UniRef90	UniRef90_UPI001D08D6B6	DNA-packaging protein	NA
UHGV-0120830_27	eggNOG-mapper	536233.CLO_1560	DNA-packaging protein gp3	NA
UHGV-0120830_28	PHROG	phrog_4264	NA	unknown function
UHGV-0120830_32	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0120830_32	eggNOG-mapper	1519439.JPJG01000054_gene2128	NA	NA
UHGV-0120830_33	UniRef90	UniRef90_A0A1C6L0N3	HTH cro/C1-type domain-containing protein	NA
UHGV-0120830_33	eggNOG-mapper	1235800.C819_01469	NA	NA
UHGV-0120830_33	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0120830_33	Structural annotation	PF20075, TIGR03070, COG1396	NA	NA
UHGV-0120830_36	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0120830_36	PHROG	phrog_95	integrase	integration and excision
UHGV-0120830_36	UniRef90	UniRef90_A0A1C6L0M1	Transposon Tn3 resolvase	NA
UHGV-0120830_36	eggNOG-mapper	697329.Rumal_3466	resolvase	NA
UHGV-0120830_36	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0120830_36	Pfam	PF07508	Recombinase	Recombinase
UHGV-0120830_36	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0120830_36	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0120830_37	UniRef90	UniRef90_A0A1C6L056	NA	NA
UHGV-0120830_37	eggNOG-mapper	411459.RUMOBE_01319	NA	NA
UHGV-0120830_37	Pfam	PF16729	NA	DUF5067
UHGV-0120830_37	Structural annotation	PF16729, MF_00791, COG3353	NA	NA
UHGV-0120830_39	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0120830_39	UniRef90	UniRef90_A0A810QA10	Terminase	NA
UHGV-0120830_39	eggNOG-mapper	1298920.KI911353_gene2682	TIGRFAM Phage	NA
UHGV-0120830_39	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0120830_39	COG	COG5410	NA	NA
UHGV-0120830_39	Structural annotation	PF17289, PF04466, MF_04147, NF033889, COG5410, COG5362	NA	NA
UHGV-0120830_40	PHROG	phrog_64	portal protein	head and packaging
UHGV-0120830_40	UniRef90	UniRef90_A0A1C6L010	Phage portal protein, SPP1 family	NA
UHGV-0120830_40	eggNOG-mapper	1121866.AUGK01000003_gene1429	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0120830_40	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0120830_40	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0120830_42	PHROG	phrog_544	major head protein	head and packaging
UHGV-0120830_42	UniRef90	UniRef90_UPI001884046F	N4-gp56 family major capsid protein	NA
UHGV-0120830_42	eggNOG-mapper	428127.EUBDOL_01555	NA	NA
UHGV-0120830_42	Structural annotation	PF06673, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0120830_43	UniRef90	UniRef90_D7GNV9	Phage QLRG family, putative DNA packaging	NA
UHGV-0120830_43	eggNOG-mapper	1298920.KI911353_gene2658	NA	NA
UHGV-0120830_43	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0120830_43	Structural annotation	TIGR01560	NA	NA
UHGV-0120830_44	eggNOG-mapper	1298920.KI911353_gene2656	NA	NA
UHGV-0120830_45	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-0120830_46	eggNOG-mapper	1121333.JMLH01000047_gene1014	NA	NA
UHGV-0120830_46	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-0120830_47	PHROG	phrog_158	major tail protein	tail
UHGV-0120830_47	UniRef90	UniRef90_A0A1C6L0H9	Phage tail protein	NA
UHGV-0120830_47	eggNOG-mapper	1232453.BAIF02000058_gene1634	NA	NA
UHGV-0120830_47	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-0120830_47	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0120830_48	UniRef90	UniRef90_A0A1C0ADY7	NA	NA
UHGV-0120830_48	eggNOG-mapper	469596.HMPREF9488_01311	NA	NA
UHGV-0120830_48	Pfam	PF16478	NA	DUF5055
UHGV-0120830_48	Structural annotation	PF16478	NA	NA
UHGV-0120830_49	eggNOG-mapper	1121333.JMLH01000047_gene1011	NA	NA
UHGV-0120830_50	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0120830_50	UniRef90	UniRef90_A0A1C6L0H4	Phage-related protein	NA
UHGV-0120830_50	eggNOG-mapper	1121866.AUGK01000003_gene1437	phage tail tape measure protein	NA
UHGV-0120830_50	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0120830_51	PHROG	phrog_1194	NA	unknown function
UHGV-0120830_51	eggNOG-mapper	742740.HMPREF9474_03515	NA	NA
UHGV-0120830_51	Pfam	PF20458	NA	DUF6711
UHGV-0120830_51	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0120830_52	PHROG	phrog_13879	NA	unknown function
UHGV-0120830_52	eggNOG-mapper	1235800.C819_00474	NA	NA
UHGV-0120830_52	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0120830_53	PHROG	phrog_18725	NA	unknown function
UHGV-0120830_53	eggNOG-mapper	1235800.C819_00473	NA	NA
UHGV-0120830_54	PHROG	phrog_25620	tail collar fiber protein	tail
UHGV-0120830_54	eggNOG-mapper	365659.smi_0469	NA	NA
UHGV-0120830_55	UniRef90	UniRef90_A0A1C6L0B1	NA	NA
UHGV-0120830_55	eggNOG-mapper	1235802.C823_01049	NA	NA
UHGV-0120830_55	Pfam	PF19789	NA	DUF6273
UHGV-0120830_56	eggNOG-mapper	97139.C824_00240	NA	NA
UHGV-0120830_56	Structural annotation	PF05635, NF008912	NA	NA
UHGV-0120830_57	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0120830_57	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0120830_57	UniRef90	UniRef90_A0A1C6L099	Retron-type reverse transcriptase	NA
UHGV-0120830_57	eggNOG-mapper	742740.HMPREF9474_02253	Reverse transcriptase (RNA-dependent DNA polymerase)	NA
UHGV-0120830_57	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0120830_57	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0120830_57	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0120830_57	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0120830_58	eggNOG-mapper	742740.HMPREF9474_02256	NA	NA
UHGV-0120830_58	Structural annotation	PF07238	NA	NA
UHGV-0120830_59	PHROG	phrog_1382	NA	unknown function
UHGV-0120830_59	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0120830_59	Structural annotation	NF040910	NA	NA
UHGV-0120830_60	PHROG	phrog_1382	NA	unknown function
UHGV-0120830_60	eggNOG-mapper	411902.CLOBOL_00118	NA	NA
UHGV-0120830_60	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0120830_61	PHROG	phrog_4105	NA	unknown function
UHGV-0120830_61	UniRef90	UniRef90_A0A8D9UHA9	Holin protein	NA
UHGV-0120830_61	eggNOG-mapper	742733.HMPREF9469_05011	NA	NA
UHGV-0120830_62	KOfam	K03749	dedD; DedD protein	NA
UHGV-0120830_62	PHROG	phrog_20388	endolysin	lysis
UHGV-0120830_62	UniRef90	UniRef90_A0A1C6L016	Sporulation-specific N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0120830_62	eggNOG-mapper	665956.HMPREF1032_00684	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0120830_62	Pfam	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	Glucosaminidase
UHGV-0120830_62	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0120830_62	Pfam	PF05036	SPOR domain	SPOR
UHGV-0120830_62	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0120830_62	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0120830_62	Structural annotation	PF01832, PF01510, PF08230, MF_04111, NF038016, NF008758, COG1705, COG3023	NA	NA
UHGV-0120830_63	PHROG	phrog_10091	holin	lysis
UHGV-0120830_63	UniRef90	UniRef90_A0A1C6KZS6	Small integral membrane protein	NA
UHGV-0120830_63	eggNOG-mapper	428127.EUBDOL_01206	COG5546 Small integral membrane protein	NA
UHGV-0120830_63	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0120830_63	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0120830_63	COG	COG5546	NA	NA
UHGV-0120830_63	Structural annotation	COG5546	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0120830	Yes	43,492 bps	43.06%	100.00%	0.9798
UHGV-0391803	No	43,492 bps	43.06%	100.00%	0.9798
UHGV-0080140	No	48,973 bps	43.30%	99.90%	0.9751
UHGV-1548881	No	45,901 bps	43.21%	99.90%	0.9794
UHGV-1271731	No	24,016 bps	43.54%	53.14%	0.9829
UHGV-1666557	No	18,694 bps	43.62%	41.63%	0.9830
UHGV-0182504	No	18,605 bps	43.62%	41.44%	0.9831
UHGV-0272282	No	18,605 bps	43.62%	41.44%	0.9831
UHGV-1313231	No	14,745 bps	42.46%	32.62%	0.9736
UHGV-1813798	No	12,829 bps	42.02%	28.22%	0.9793
UHGV-0074512	No	11,647 bps	42.31%	25.69%	0.9807
UHGV-1630617	No	11,445 bps	42.22%	25.15%	0.9798
UHGV-2197994	No	10,519 bps	43.95%	23.23%	0.9832