vOTU-047192

Overview

vOTU representative UHGV-0191865

No. of genomes 3

Genome length 46,157 bps

Completeness 100.00% (complete)

Host Holdemanella

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047192
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00062 › vSUBFAM-00170 › vGENUS-00088 › vSUBGEN-32283 › vOTU-047192
Host taxonomy	Bacteria › Firmicutes › Bacilli › Erysipelotrichales › Erysipelotrichaceae › Holdemanella
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0191865
BioSample	SAMEA2737773
Genome length	46,157 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	77
CDS density	87.65%
tRNA count	2
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0191865_2	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0191865_2	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0191865_2	UniRef90	UniRef90_A0A395WER8	Bac_DnaA domain-containing protein	NA
UHGV-0191865_2	eggNOG-mapper	1211844.CBLM010000016_gene1509	NA	NA
UHGV-0191865_2	Pfam	PF00308	Bacterial dnaA protein	Bac_DnaA
UHGV-0191865_2	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0191865_2	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-0191865_3	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0191865_3	UniRef90	UniRef90_A0A395WBX6	Phg_2220_C domain-containing protein	NA
UHGV-0191865_3	eggNOG-mapper	279808.SH2379	Conserved phage C-terminus (Phg_2220_C)	NA
UHGV-0191865_3	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-0191865_3	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-0191865_3	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0191865_3	Structural annotation	PF09524, PF08679, MF_01909, TIGR02220, NF040939, COG1675	NA	NA
UHGV-0191865_7	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0191865_7	PHROG	phrog_1	integrase	integration and excision
UHGV-0191865_7	UniRef90	UniRef90_A0A395W9T7	Site-specific integrase	NA
UHGV-0191865_7	eggNOG-mapper	908340.HMPREF9406_2589	Belongs to the 'phage' integrase family	NA
UHGV-0191865_7	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0191865_7	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0191865_7	Structural annotation	PF00589, PF13495, MF_02055, NF040815, COG4974	NA	NA
UHGV-0191865_9	UniRef90	UniRef90_UPI001D14AAA4	NA	NA
UHGV-0191865_12	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0191865_12	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0191865_12	UniRef90	UniRef90_A0A413CSI3	XRE family transcriptional regulator	NA
UHGV-0191865_12	eggNOG-mapper	999413.HMPREF1094_02045	Helix-turn-helix XRE-family like proteins	NA
UHGV-0191865_12	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0191865_12	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0191865_12	Structural annotation	PF01381, MF_00535, NF007257, COG1476	NA	NA
UHGV-0191865_13	UniRef90	UniRef90_UPI000E43E2F6	heavy metal-binding domain-containing protein	NA
UHGV-0191865_13	eggNOG-mapper	517418.Ctha_1419	Putative heavy-metal-binding	NA
UHGV-0191865_13	Pfam	PF01906	Putative heavy-metal-binding	YbjQ_1
UHGV-0191865_13	COG	COG0393	NA	NA
UHGV-0191865_14	KOfam	K18841	chpB, chpBK; mRNA interferase ChpB [EC:3.1.-.-]	NA
UHGV-0191865_14	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0191865_14	UniRef90	UniRef90_A0A6N7VH90	Type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0191865_14	eggNOG-mapper	457405.FSDG_01637	Toxic component of a toxin-antitoxin (TA) module	NA
UHGV-0191865_14	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0191865_14	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0191865_14	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0191865_15	KOfam	K07172	mazE, chpAI; antitoxin MazE	NA
UHGV-0191865_15	PHROG	phrog_4324	NA	unknown function
UHGV-0191865_15	UniRef90	UniRef90_A0A6N7V4Q9	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA
UHGV-0191865_15	eggNOG-mapper	1122173.AXVL01000008_gene1112	PFAM SpoVT AbrB	NA
UHGV-0191865_15	Pfam	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
UHGV-0191865_15	COG	COG2336	Antitoxin component MazE of the MazEF toxin-antitoxin module	NA
UHGV-0191865_15	Structural annotation	PF04014, MF_01193, NF008463, COG2336	NA	NA
UHGV-0191865_16	PHROG	phrog_5059	NA	unknown function
UHGV-0191865_16	UniRef90	UniRef90_A0A395WDV4	NA	NA
UHGV-0191865_16	eggNOG-mapper	1232446.BAIE02000002_gene792	NA	NA
UHGV-0191865_16	Pfam	PF08861	NA	DUF1828
UHGV-0191865_16	Pfam	PF08862	NA	DUF1829
UHGV-0191865_16	Structural annotation	PF08862, PF08861, MF_00722, COG3372	NA	NA
UHGV-0191865_17	PHROG	phrog_21094	NA	unknown function
UHGV-0191865_17	UniRef90	UniRef90_A0A2A2EE23	NA	NA
UHGV-0191865_17	eggNOG-mapper	428127.EUBDOL_01263	NA	NA
UHGV-0191865_18	KOfam	K14059	int; integrase	NA
UHGV-0191865_18	PHROG	phrog_1	integrase	integration and excision
UHGV-0191865_18	UniRef90	UniRef90_A0A395WBW7	Site-specific integrase	NA
UHGV-0191865_18	eggNOG-mapper	1235796.C815_00955	DNA integration	NA
UHGV-0191865_18	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0191865_18	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0191865_18	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0191865_19	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0191865_19	PHROG	phrog_3088	amidase	lysis
UHGV-0191865_19	UniRef90	UniRef90_A0A413UF85	N-acetylmuramoyl-L-alanine amidase domain-containing protein	NA
UHGV-0191865_19	eggNOG-mapper	428125.CLOLEP_01782	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0191865_19	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0191865_19	Pfam	PF08460	Bacterial SH3 domain	SH3_5
UHGV-0191865_19	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0191865_19	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0191865_20	PHROG	phrog_443	holin	lysis
UHGV-0191865_20	UniRef90	UniRef90_A0A2U2ELA1	Membrane protein	NA
UHGV-0191865_20	eggNOG-mapper	476272.RUMHYD_01759	Putative lactococcus lactis phage r1t holin	NA
UHGV-0191865_20	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0191865_20	Structural annotation	PF16945	NA	NA
UHGV-0191865_22	PHROG	phrog_20016	NA	unknown function
UHGV-0191865_22	UniRef90	UniRef90_A0A395WF88	BclA_C domain-containing protein	NA
UHGV-0191865_22	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0191865_22	Pfam	PF18573	BclA C-terminal domain	BclA_C
UHGV-0191865_22	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0191865_23	UniRef90	UniRef90_A0A8F0WFQ8	Outer capsid protein/viral fiber	NA
UHGV-0191865_23	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0191865_30	PHROG	phrog_19280	NA	unknown function
UHGV-0191865_30	UniRef90	UniRef90_A0A413UF00	NA	NA
UHGV-0191865_30	Pfam	PF19789	NA	DUF6273
UHGV-0191865_30	Structural annotation	PF19789	NA	NA
UHGV-0191865_32	Structural annotation	PF16407, TIGR02657, COG3794	NA	NA
UHGV-0191865_33	Structural annotation	PF05895, MF_04116, NF010681, COG1361	NA	NA
UHGV-0191865_34	Structural annotation	PF10651, COG5513	NA	NA
UHGV-0191865_35	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0191865_35	eggNOG-mapper	1232446.BAIE02000002_gene836	Phage minor structural protein	NA
UHGV-0191865_35	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0191865_35	COG	COG4926	Phage-related protein	NA
UHGV-0191865_35	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0191865_36	Structural annotation	PF05939, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0191865_37	KOfam	K20478	GOLGB1; golgin subfamily B member 1	NA
UHGV-0191865_37	PHROG	phrog_13339	tail length tape measure protein	tail
UHGV-0191865_37	UniRef90	UniRef90_A0A395WD11	Phage tail tape measure protein	NA
UHGV-0191865_37	eggNOG-mapper	423476.A3F654_9CAUD	peptidoglycan catabolic process	NA
UHGV-0191865_37	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0191865_37	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0191865_37	Structural annotation	PF10145, TIGR01760, TIGR02971, COG5280	NA	NA
UHGV-0191865_38	PHROG	phrog_3033	NA	unknown function
UHGV-0191865_39	Structural annotation	PF11836	NA	NA
UHGV-0191865_40	PHROG	phrog_88	major tail protein	tail
UHGV-0191865_40	UniRef90	UniRef90_A0A395WA58	Phage tail protein	NA
UHGV-0191865_40	eggNOG-mapper	1111134.HMPREF1253_0377	Phage major tail protein, phi13 family	NA
UHGV-0191865_40	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0191865_40	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0191865_41	UniRef90	UniRef90_A0A374RUJ8	HK97 gp10 family phage protein	NA
UHGV-0191865_41	eggNOG-mapper	86416.Clopa_0344	NA	NA
UHGV-0191865_41	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0191865_41	Structural annotation	PF20039, TIGR01725, COG5005	NA	NA
UHGV-0191865_42	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-0191865_43	PHROG	phrog_1951	head-tail adaptor	connector
UHGV-0191865_43	UniRef90	UniRef90_A0A395WC07	Head-tail adaptor protein	NA
UHGV-0191865_43	eggNOG-mapper	588581.Cpap_1270	NA	NA
UHGV-0191865_43	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0191865_44	PHROG	phrog_5223	neck protein	connector
UHGV-0191865_44	UniRef90	UniRef90_A0A374RXD1	DNA-packaging protein	NA
UHGV-0191865_44	Structural annotation	TIGR01560	NA	NA
UHGV-0191865_45	PHROG	phrog_10	major head protein	head and packaging
UHGV-0191865_45	UniRef90	UniRef90_A0A395WF70	Phage major capsid protein	NA
UHGV-0191865_45	eggNOG-mapper	1536774.H70357_10630	Phage capsid family	NA
UHGV-0191865_45	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0191865_45	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0191865_45	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0191865_45	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0191865_46	KOfam	K06904	NA	NA
UHGV-0191865_46	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0191865_46	UniRef90	UniRef90_A0A413UET6	HK97 family phage prohead protease	NA
UHGV-0191865_46	eggNOG-mapper	445975.COLSTE_02163	Caudovirus prohead serine protease	NA
UHGV-0191865_46	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0191865_46	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0191865_46	COG	COG3740	Phage head maturation protease	NA
UHGV-0191865_46	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0191865_47	PHROG	phrog_12	portal protein	head and packaging
UHGV-0191865_47	UniRef90	UniRef90_A0A395W9X2	Phage portal protein	NA
UHGV-0191865_47	eggNOG-mapper	1203606.HMPREF1526_01337	Portal protein	NA
UHGV-0191865_47	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0191865_47	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0191865_47	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0191865_48	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0191865_48	UniRef90	UniRef90_A0A395WD03	Terminase large subunit	NA
UHGV-0191865_48	eggNOG-mapper	742740.HMPREF9474_04307	COG COG4626 Phage terminase-like protein, large subunit	NA
UHGV-0191865_48	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0191865_48	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0191865_48	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0191865_48	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0191865_49	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-0191865_49	UniRef90	UniRef90_A0A7C6YMQ8	P27 family phage terminase small subunit	NA
UHGV-0191865_49	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0191865_49	COG	COG3747	Phage terminase, small subunit	NA
UHGV-0191865_49	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0191865_50	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0191865_50	UniRef90	UniRef90_A0A395WA48	HNH endonuclease	NA
UHGV-0191865_50	eggNOG-mapper	1211814.CAPG01000074_gene3460	HNH endonuclease	NA
UHGV-0191865_50	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0191865_50	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0191865_51	eggNOG-mapper	502558.EGYY_11910	NA	NA
UHGV-0191865_61	PHROG	phrog_2316	NA	unknown function
UHGV-0191865_61	UniRef90	UniRef90_A0A3E4YBW5	NA	NA
UHGV-0191865_61	eggNOG-mapper	1280676.AUJO01000024_gene3262	NA	NA
UHGV-0191865_61	Structural annotation	PF16475, MF_00436, NF033216	NA	NA
UHGV-0191865_62	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0191865_62	UniRef90	UniRef90_A0A0J8Z1B9	Prophage pi1 protein 29	NA
UHGV-0191865_62	eggNOG-mapper	272623.L62008	NA	NA
UHGV-0191865_63	UniRef90	UniRef90_A0A413UEX6	NA	NA
UHGV-0191865_63	Pfam	PF07374	NA	DUF1492
UHGV-0191865_63	Structural annotation	PF07374, NF008895	NA	NA
UHGV-0191865_67	PHROG	phrog_22292	NA	unknown function
UHGV-0191865_69	Structural annotation	PF17399	NA	NA
UHGV-0191865_73	Structural annotation	PF17888	NA	NA
UHGV-0191865_74	PHROG	phrog_173	nucleoside triphosphate pyrophosphohydrolase	DNA, RNA and nucleotide metabolism
UHGV-0191865_74	UniRef90	UniRef90_UPI001C25836D	dUTPase	NA
UHGV-0191865_74	eggNOG-mapper	1174504.AJTN02000191_gene4276	dUTPase	NA
UHGV-0191865_74	Pfam	PF08761	dUTPase	dUTPase_2
UHGV-0191865_74	COG	COG4508	Dimeric dUTPase, all-alpha-NTP-PPase (MazG) superfamily	NA
UHGV-0191865_74	Structural annotation	PF08761, COG4508	NA	NA
UHGV-0191865_75	Structural annotation	PF11184	NA	NA
UHGV-0191865_76	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0191865_76	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0191865_76	UniRef90	UniRef90_A0A374RXA8	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0191865_76	eggNOG-mapper	1410650.JHWL01000037_gene595	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0191865_76	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0191865_76	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0191865_76	Structural annotation	PF01507, MF_00063, NF006327, COG0175	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0191865	Yes	46,157 bps	32.76%	100.00%	0.9713
UHGV-0074866	No	46,210 bps	32.74%	99.90%	0.9728
UHGV-1536379	No	42,166 bps	32.97%	93.92%	0.9717