vOTU-047277

Overview

vOTU representative UHGV-0194522

No. of genomes 15

Genome length 59,639 bps

Completeness 100.00% (complete)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047277
Number of genomes	15
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-00439 › vGENUS-00414 › vSUBGEN-07841 › vOTU-047277
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0194522
BioSample	SAMN05827072
Genome length	59,639 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	108
CDS density	85.38%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0194522_2	PHROG	phrog_4105	NA	unknown function
UHGV-0194522_2	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-0194522_3	PHROG	phrog_1129	holin	lysis
UHGV-0194522_3	UniRef90	UniRef90_A0A8D9UII9	Holin	NA
UHGV-0194522_3	eggNOG-mapper	411461.DORFOR_00721	NA	NA
UHGV-0194522_3	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0194522_3	Structural annotation	PF06946	NA	NA
UHGV-0194522_4	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0194522_5	PHROG	phrog_1233	NA	unknown function
UHGV-0194522_5	eggNOG-mapper	357809.Cphy_2967	NA	NA
UHGV-0194522_6	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0194522_6	UniRef90	UniRef90_UPI001BBD4500	HK97 gp10 family phage protein	NA
UHGV-0194522_6	eggNOG-mapper	397290.C810_01411	NA	NA
UHGV-0194522_6	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-0194522_7	Structural annotation	PF05657	NA	NA
UHGV-0194522_8	eggNOG-mapper	476272.RUMHYD_01968	NA	NA
UHGV-0194522_8	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0194522_11	KOfam	K07273	acm; lysozyme	NA
UHGV-0194522_11	PHROG	phrog_291	endolysin	lysis
UHGV-0194522_11	UniRef90	UniRef90_UPI001D05F2B6	peptidoglycan-binding protein	NA
UHGV-0194522_11	eggNOG-mapper	1235800.C819_00458	Glycosyl hydrolases family 25	NA
UHGV-0194522_11	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0194522_11	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0194522_11	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0194522_11	Structural annotation	PF01183, PF01471, MF_02227, NF007360, COG3757, COG3409	NA	NA
UHGV-0194522_12	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0194522_12	eggNOG-mapper	1298920.KI911353_gene2649	tape measure	NA
UHGV-0194522_12	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0194522_15	eggNOG-mapper	1304866.K413DRAFT_0769	NA	NA
UHGV-0194522_16	PHROG	phrog_1194	NA	unknown function
UHGV-0194522_16	eggNOG-mapper	1298920.KI911353_gene4840	NA	NA
UHGV-0194522_16	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0194522_17	PHROG	phrog_13879	NA	unknown function
UHGV-0194522_17	eggNOG-mapper	742740.HMPREF9474_03516	NA	NA
UHGV-0194522_17	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0194522_18	PHROG	phrog_18725	NA	unknown function
UHGV-0194522_18	eggNOG-mapper	1235800.C819_00473	NA	NA
UHGV-0194522_18	Structural annotation	PF19077	NA	NA
UHGV-0194522_19	KOfam	K13276	bpr; bacillopeptidase F [EC:3.4.21.-]	NA
UHGV-0194522_19	PHROG	phrog_11157	NA	unknown function
UHGV-0194522_19	UniRef90	UniRef90_D3ABG9	Big_13 domain-containing protein	NA
UHGV-0194522_19	eggNOG-mapper	1304866.K413DRAFT_0771	NA	NA
UHGV-0194522_19	Pfam	PF19077	Bacterial Ig-like domain	Big_13
UHGV-0194522_19	Pfam	PF09136	Glucodextranase, domain B	Glucodextran_B
UHGV-0194522_19	COG	COG3292	Periplasmic ligand-binding sensor domain	NA
UHGV-0194522_19	Structural annotation	PF09136, PF13205, PF13754, MF_04116, NF032891, COG2372, COG5456	NA	NA
UHGV-0194522_21	eggNOG-mapper	1304866.K413DRAFT_0769	NA	NA
UHGV-0194522_22	UniRef90	UniRef90_A0A417WCN8	Acyl carrier protein	NA
UHGV-0194522_22	eggNOG-mapper	1235799.C818_04237	NA	NA
UHGV-0194522_22	Structural annotation	PF14301	NA	NA
UHGV-0194522_24	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0194522_24	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0194522_24	UniRef90	UniRef90_UPI001D029144	transcriptional regulator	NA
UHGV-0194522_24	eggNOG-mapper	457412.RSAG_00795	sequence-specific DNA binding	NA
UHGV-0194522_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0194522_24	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0194522_24	Structural annotation	PF01381, NF007257, COG3655	NA	NA
UHGV-0194522_25	UniRef90	UniRef90_UPI001D0090A6	NA	NA
UHGV-0194522_25	eggNOG-mapper	411470.RUMGNA_03231	NA	NA
UHGV-0194522_25	Pfam	PF05339	NA	DUF739
UHGV-0194522_25	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0194522_25	Structural annotation	PF05339, NF002773, COG1476	NA	NA
UHGV-0194522_28	PHROG	phrog_4608	anti-repressor	transcription regulation
UHGV-0194522_28	UniRef90	UniRef90_UPI001D00AF42	ORF6N domain-containing protein	NA
UHGV-0194522_28	eggNOG-mapper	926561.KB900622_gene670	ORF6N domain	NA
UHGV-0194522_28	Pfam	PF10543	ORF6N domain	ORF6N
UHGV-0194522_28	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0194522_28	Structural annotation	PF10543, TIGR02681, COG3561	NA	NA
UHGV-0194522_30	PHROG	phrog_22292	NA	unknown function
UHGV-0194522_33	Pfam	PF08769	Sporulation initiation factor Spo0A C terminal	Spo0A_C
UHGV-0194522_33	Structural annotation	PF08769, TIGR02875	NA	NA
UHGV-0194522_34	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0194522_34	PHROG	phrog_26861	NA	unknown function
UHGV-0194522_34	UniRef90	UniRef90_UPI000D39D54D	single-stranded DNA-binding protein	NA
UHGV-0194522_34	eggNOG-mapper	556261.HMPREF0240_03736	PFAM single-strand binding protein	NA
UHGV-0194522_34	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0194522_34	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0194522_34	Structural annotation	PF00436, PF13567, MF_00984, NF004476, COG0629	NA	NA
UHGV-0194522_36	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0194522_36	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0194522_36	UniRef90	UniRef90_A0A8D9PGW5	Chromosome partition protein	NA
UHGV-0194522_36	eggNOG-mapper	1298920.KI911353_gene2731	nuclear chromosome segregation	NA
UHGV-0194522_36	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0194522_36	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0194522_37	Structural annotation	PF18597	NA	NA
UHGV-0194522_38	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0194522_38	UniRef90	UniRef90_UPI001BC46C39	Recombinase RecT	NA
UHGV-0194522_38	eggNOG-mapper	658655.HMPREF0988_00886	NA	NA
UHGV-0194522_38	Pfam	PF03837	RecT family	RecT
UHGV-0194522_38	Structural annotation	NF007351, COG3723	NA	NA
UHGV-0194522_39	PHROG	phrog_25456	NA	unknown function
UHGV-0194522_40	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0194522_40	UniRef90	UniRef90_A0A416G2C4	MBL fold metallo-hydrolase	NA
UHGV-0194522_40	eggNOG-mapper	397290.C810_01486	May be involved in the transport of PQQ or its precursor to the periplasm	NA
UHGV-0194522_40	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0194522_40	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0194522_40	Structural annotation	PF02112, MF_00457, NF041851, COG2220	NA	NA
UHGV-0194522_42	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0194522_42	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0194522_42	UniRef90	UniRef90_R9KL32	Single-stranded DNA-binding protein	NA
UHGV-0194522_42	eggNOG-mapper	397290.C810_01495	Single-strand binding protein family	NA
UHGV-0194522_42	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0194522_42	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0194522_42	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0194522_42	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0194522_42	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0194522_43	PHROG	phrog_19106	NA	unknown function
UHGV-0194522_43	UniRef90	UniRef90_A0A173RDE6	Group I intron endonuclease	NA
UHGV-0194522_43	eggNOG-mapper	658655.HMPREF0988_00875	NA	NA
UHGV-0194522_43	Structural annotation	TIGR01453	NA	NA
UHGV-0194522_44	eggNOG-mapper	397288.C806_00098	NA	NA
UHGV-0194522_47	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0194522_49	PHROG	phrog_8684	NA	unknown function
UHGV-0194522_49	UniRef90	UniRef90_A0A3E4YM29	YopX domain-containing protein	NA
UHGV-0194522_49	eggNOG-mapper	1121097.JCM15093_2710	YopX protein	NA
UHGV-0194522_49	Pfam	PF09643	YopX protein	YopX
UHGV-0194522_49	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0194522_49	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0194522_50	PHROG	phrog_8489	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0194522_50	UniRef90	UniRef90_UPI001BB8B78A	Phage replication initiation protein	NA
UHGV-0194522_50	eggNOG-mapper	1415774.U728_867	DnaD domain protein	NA
UHGV-0194522_50	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0194522_53	PHROG	phrog_20593	NA	unknown function
UHGV-0194522_53	AcrCatalog	cluster_27421	NA	NA
UHGV-0194522_55	PHROG	phrog_625	NA	unknown function
UHGV-0194522_55	UniRef90	UniRef90_A0A3E4M7G5	ASCH domain-containing protein	NA
UHGV-0194522_55	eggNOG-mapper	1235800.C819_02245	NA	NA
UHGV-0194522_58	Structural annotation	PF11184	NA	NA
UHGV-0194522_61	UniRef90	UniRef90_A0A8D9PGK7	Response regulator	NA
UHGV-0194522_61	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-0194522_61	Structural annotation	PF00196, MF_00245, NF001067, COG2771	NA	NA
UHGV-0194522_63	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0194522_63	PHROG	phrog_95	integrase	integration and excision
UHGV-0194522_63	UniRef90	UniRef90_UPI001D084942	recombinase family protein	NA
UHGV-0194522_63	eggNOG-mapper	1384065.JAGS01000001_gene1134	NA	NA
UHGV-0194522_63	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0194522_63	Pfam	PF07508	Recombinase	Recombinase
UHGV-0194522_63	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0194522_63	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0194522_63	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0194522_65	PHROG	phrog_21718	NA	unknown function
UHGV-0194522_65	eggNOG-mapper	658655.HMPREF0988_00919	NA	NA
UHGV-0194522_66	eggNOG-mapper	658655.HMPREF0988_00918	NA	NA
UHGV-0194522_67	PHROG	phrog_16490	NA	unknown function
UHGV-0194522_67	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0194522_68	PHROG	phrog_20016	NA	unknown function
UHGV-0194522_68	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0194522_68	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-0194522_68	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0194522_69	eggNOG-mapper	658655.HMPREF0988_00915	NA	NA
UHGV-0194522_70	eggNOG-mapper	397290.C810_01336	NA	NA
UHGV-0194522_70	Structural annotation	PF20352, COG2856	NA	NA
UHGV-0194522_75	PHROG	phrog_31631	NA	unknown function
UHGV-0194522_81	eggNOG-mapper	1121342.AUCO01000003_gene1501	NA	NA
UHGV-0194522_81	PADLOC	mkCas0106	CAS-I-B; effector_LS	CRISPR-CAS
UHGV-0194522_83	eggNOG-mapper	397290.C810_01353	NA	NA
UHGV-0194522_85	PHROG	phrog_1491	tail fiber protein	tail
UHGV-0194522_85	eggNOG-mapper	397290.C810_01362	NA	NA
UHGV-0194522_85	Structural annotation	NF038048	NA	NA
UHGV-0194522_92	KOfam	K07483	K07483; transposase	NA
UHGV-0194522_92	PHROG	phrog_151	transposase	integration and excision
UHGV-0194522_92	UniRef90	UniRef90_A0A0V8QBL4	Transposase	NA
UHGV-0194522_92	eggNOG-mapper	500632.CLONEX_04250	Transposase	NA
UHGV-0194522_92	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0194522_92	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0194522_92	Structural annotation	PF02796, MF_00674, NF006928, COG3415	NA	NA
UHGV-0194522_93	KOfam	K07497	K07497; putative transposase	NA
UHGV-0194522_93	PHROG	phrog_157	transposase	integration and excision
UHGV-0194522_93	UniRef90	UniRef90_A0A0V8QC51	Transposase	NA
UHGV-0194522_93	eggNOG-mapper	1280698.AUJS01000133_gene2149	NA	NA
UHGV-0194522_93	Pfam	PF13276	HTH-like domain	HTH_21
UHGV-0194522_93	Pfam	PF00665	Integrase core domain	rve
UHGV-0194522_93	Pfam	PF13683	Integrase core domain	rve_3
UHGV-0194522_93	NCBIFam	NF033516.0	IS3 family transposase	NA
UHGV-0194522_93	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-0194522_93	Structural annotation	PF00665, PF13276, NF033516, COG2801	NA	NA
UHGV-0194522_94	UniRef90	UniRef90_A0A8D9PGN8	Acetyl-coA carboxylase zinc finger domain protein	NA
UHGV-0194522_100	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0194522_100	UniRef90	UniRef90_UPI001D009E65	phage terminase large subunit	NA
UHGV-0194522_100	eggNOG-mapper	1121866.AUGK01000003_gene1428	chromosome segregation	NA
UHGV-0194522_100	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0194522_100	COG	COG5410	NA	NA
UHGV-0194522_100	Structural annotation	PF17289, PF05876, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0194522_101	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0194522_101	UniRef90	UniRef90_A0A352SH29	RNA polymerase subunit sigma-70 (Fragment)	NA
UHGV-0194522_101	eggNOG-mapper	97138.C820_00221	sigma factor activity	NA
UHGV-0194522_101	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0194522_101	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0194522_104	PHROG	phrog_64	portal protein	head and packaging
UHGV-0194522_104	UniRef90	UniRef90_R6CA99	SPP1 family phage portal protein	NA
UHGV-0194522_104	eggNOG-mapper	1298920.KI911353_gene2663	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0194522_104	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0194522_104	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0194522_105	UniRef90	UniRef90_R6C0B6	Phage capsid scaffolding protein	NA
UHGV-0194522_105	eggNOG-mapper	1298920.KI911353_gene2662	NA	NA
UHGV-0194522_106	PHROG	phrog_909	major head protein	head and packaging
UHGV-0194522_106	eggNOG-mapper	1298920.KI911353_gene2661	NA	NA
UHGV-0194522_107	PHROG	phrog_29	major head protein	head and packaging
UHGV-0194522_107	UniRef90	UniRef90_UPI001D02C54B	major capsid protein	NA
UHGV-0194522_107	eggNOG-mapper	1298920.KI911353_gene2660	Phage major capsid protein E	NA
UHGV-0194522_107	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0194522_107	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0194522_108	Structural annotation	PF21169	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0194522	Yes	59,639 bps	37.83%	100.00%	0.9785
UHGV-1891565	No	59,785 bps	37.54%	98.67%	0.9792
UHGV-0148438	No	59,746 bps	37.83%	98.55%	0.9782
UHGV-1405368	No	59,746 bps	37.83%	98.55%	0.9782
UHGV-0063740	No	59,462 bps	37.67%	98.09%	0.9795
UHGV-1534936	No	36,806 bps	38.16%	60.72%	0.9812
UHGV-1503452	No	35,643 bps	37.02%	58.84%	0.9783
UHGV-0065131	No	35,368 bps	38.22%	58.34%	0.9812
UHGV-0255270	No	30,595 bps	37.72%	50.45%	0.9799
UHGV-0230930	No	28,500 bps	37.52%	47.03%	0.9797
UHGV-1565617	No	24,253 bps	37.84%	40.04%	0.9780
UHGV-1688924	No	23,455 bps	38.60%	38.66%	0.9813
UHGV-1598107	No	16,482 bps	38.08%	27.95%	0.9823
UHGV-1721639	No	10,513 bps	37.67%	17.92%	0.9815
UHGV-1552126	No	10,248 bps	39.17%	16.88%	0.9802