vOTU-047298

Overview

vOTU representative UHGV-0195138

No. of genomes 2

Genome length 38,393 bps

Completeness 100.00% (complete)

Host Unclassified

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047298
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 › vSUBFAM-05951 › vGENUS-14061 › vSUBGEN-23235 › vOTU-047298
Host taxonomy
Host range breadth
Host prediction method
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195138
BioSample	SAMN05826761
Genome length	38,393 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	36
CDS density	94.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195138_1	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0195138_1	PHROG	phrog_95	integrase	integration and excision
UHGV-0195138_1	UniRef90	UniRef90_UPI000C08D0C8	recombinase family protein	NA
UHGV-0195138_1	eggNOG-mapper	397291.C804_01964	Resolvase, N terminal domain	NA
UHGV-0195138_1	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0195138_1	Pfam	PF07508	Recombinase	Recombinase
UHGV-0195138_1	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0195138_1	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0195138_1	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0195138_2	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0195138_2	PHROG	phrog_95	integrase	integration and excision
UHGV-0195138_2	UniRef90	UniRef90_UPI000C075330	recombinase family protein	NA
UHGV-0195138_2	eggNOG-mapper	573061.Clocel_0847	resolvase	NA
UHGV-0195138_2	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0195138_2	Pfam	PF07508	Recombinase	Recombinase
UHGV-0195138_2	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0195138_2	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0195138_2	Structural annotation	PF00239, PF07508, PF18822, NF041201, COG1961	NA	NA
UHGV-0195138_3	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0195138_3	PHROG	phrog_2801	NA	unknown function
UHGV-0195138_3	UniRef90	UniRef90_UPI0002FC0E67	AAA family ATPase	NA
UHGV-0195138_3	eggNOG-mapper	862970.SAIN_0057	AAA domain	NA
UHGV-0195138_3	Pfam	PF13166	AAA domain	AAA_13
UHGV-0195138_3	COG	COG4694	Wobble nucleotide-excising tRNase	NA
UHGV-0195138_4	KOfam	K01153	hsdR; type I restriction enzyme, R subunit [EC:3.1.21.3]	NA
UHGV-0195138_4	PHROG	phrog_3830	NA	unknown function
UHGV-0195138_4	UniRef90	UniRef90_UPI001EE7F6F1	DEAD/DEAH box helicase family protein	NA
UHGV-0195138_4	eggNOG-mapper	552396.HMPREF0863_01407	Subunit R is required for both nuclease and ATPase activities, but not for modification	NA
UHGV-0195138_4	PADLOC	REase_I_00001	Type I restriction enzyme	RM
UHGV-0195138_4	Pfam	PF04313	Type I restriction enzyme R protein N terminus (HSDR_N)	HSDR_N
UHGV-0195138_4	Pfam	PF18766	SWI2/SNF2 ATPase	SWI2_SNF2
UHGV-0195138_4	COG	COG0610	Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ...	NA
UHGV-0195138_4	Structural annotation	PF12008, PF04313, PF18766, MF_00968, TIGR00348, COG0610	NA	NA
UHGV-0195138_5	eggNOG-mapper	1256908.HMPREF0373_03385	NA	NA
UHGV-0195138_6	UniRef90	UniRef90_A0A3E5A0Z8	TFIIB-type zinc ribbon-containing protein	NA
UHGV-0195138_6	eggNOG-mapper	1121423.JONT01000036_gene873	NA	NA
UHGV-0195138_7	KOfam	K01154	hsdS; type I restriction enzyme, S subunit [EC:3.1.21.3]	NA
UHGV-0195138_7	PHROG	phrog_2668	NA	unknown function
UHGV-0195138_7	UniRef90	UniRef90_A0A5B9YDG4	Restriction endonuclease subunit S	NA
UHGV-0195138_7	eggNOG-mapper	658659.HMPREF0983_02130	Type I restriction	NA
UHGV-0195138_7	PADLOC	Specificity_I_00123	Type I specificity subunit	RM
UHGV-0195138_7	Pfam	PF01420	Type I restriction modification DNA specificity domain	Methylase_S
UHGV-0195138_7	COG	COG0732	Restriction endonuclease S subunit	NA
UHGV-0195138_7	Structural annotation	PF01420, NF007278, COG0732	NA	NA
UHGV-0195138_8	KOfam	K03427	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	NA
UHGV-0195138_8	PHROG	phrog_34860	NA	unknown function
UHGV-0195138_8	UniRef90	UniRef90_UPI001EE81D64	type I restriction-modification system subunit M	NA
UHGV-0195138_8	eggNOG-mapper	445972.ANACOL_02509	N-6 DNA methylase	NA
UHGV-0195138_8	PADLOC	MTase_I_00012	Type I methyltransferase	RM
UHGV-0195138_8	Pfam	PF12161	HsdM N-terminal domain	HsdM_N
UHGV-0195138_8	Pfam	PF02384	N-6 DNA Methylase	N6_Mtase
UHGV-0195138_8	COG	COG0286	Type I restriction-modification system, DNA methylase subunit	NA
UHGV-0195138_8	Structural annotation	PF02384, PF12161, MF_01862, TIGR00497, COG0286	NA	NA
UHGV-0195138_9	KOfam	K07727	K07727; putative transcriptional regulator	NA
UHGV-0195138_9	UniRef90	UniRef90_A0A645AZI5	HTH cro/C1-type domain-containing protein	NA
UHGV-0195138_9	eggNOG-mapper	665956.HMPREF1032_00948	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0195138_9	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0195138_9	COG	COG3655	DNA-binding transcriptional regulator, XRE family	NA
UHGV-0195138_9	Structural annotation	PF13443, NF000090, COG3655	NA	NA
UHGV-0195138_10	KOfam	K02335	polA; DNA polymerase I [EC:2.7.7.7]	NA
UHGV-0195138_10	PHROG	phrog_17	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0195138_10	UniRef90	UniRef90_A0A410Q2L0	DNA polymerase I	NA
UHGV-0195138_10	eggNOG-mapper	498761.HM1_2898	DNA polymerase	NA
UHGV-0195138_10	PADLOC	drt-cluster58	DRT	DRT
UHGV-0195138_10	Pfam	PF01612	3'-5' exonuclease	DNA_pol_A_exo1
UHGV-0195138_10	Pfam	PF00476	DNA polymerase family A	DNA_pol_A
UHGV-0195138_10	NCBIFam	NF011541.0	bifunctional 3'-5' exonuclease/DNA polymerase	NA
UHGV-0195138_10	COG	COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	NA
UHGV-0195138_10	Structural annotation	PF00476, PF01612, MF_04101, NF011541, COG0749	NA	NA
UHGV-0195138_11	PHROG	phrog_864	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0195138_11	UniRef90	UniRef90_A0A6N8HVQ0	SF3 helicase domain-containing protein	NA
UHGV-0195138_11	eggNOG-mapper	498761.HM1_2896	Phage plasmid primase, P4 family	NA
UHGV-0195138_11	Pfam	PF16793	RepB DNA-primase from phage plasmid	RepB_primase
UHGV-0195138_11	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0195138_11	Pfam	PF19263	NA	DUF5906
UHGV-0195138_11	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0195138_11	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0195138_11	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0195138_11	Structural annotation	PF16793, PF04735, MF_04000, NF005477, NF040561, COG3378	NA	NA
UHGV-0195138_12	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0195138_12	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195138_12	UniRef90	UniRef90_A0A1C0BQL1	HNH endonuclease	NA
UHGV-0195138_12	eggNOG-mapper	1216932.CM240_0662	HNH endonuclease	NA
UHGV-0195138_12	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0195138_12	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0195138_12	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0195138_13	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0195138_13	UniRef90	UniRef90_A0A3D4QWF6	Terminase	NA
UHGV-0195138_13	eggNOG-mapper	693746.OBV_41670	NA	NA
UHGV-0195138_13	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0195138_14	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0195138_14	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0195138_14	UniRef90	UniRef90_A0A6N8HVB7	Methyltransferase	NA
UHGV-0195138_14	eggNOG-mapper	203119.Cthe_1638	NA	NA
UHGV-0195138_14	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0195138_14	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0195138_14	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0195138_14	COG	COG0863	DNA modification methylase	NA
UHGV-0195138_14	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0195138_15	KOfam	K03830	yafP; putative acetyltransferase [EC:2.3.1.-]	NA
UHGV-0195138_15	UniRef90	UniRef90_A0A410Q2L4	GNAT family N-acetyltransferase	NA
UHGV-0195138_15	eggNOG-mapper	742723.HMPREF9477_01645	Acetyltransferase (GNAT) domain	NA
UHGV-0195138_15	Pfam	PF13673	Acetyltransferase (GNAT) domain	Acetyltransf_10
UHGV-0195138_15	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0195138_16	PHROG	phrog_2443	amidoligase enzyme	other
UHGV-0195138_16	UniRef90	UniRef90_UPI000C06CF19	virulence protein	NA
UHGV-0195138_16	eggNOG-mapper	696281.Desru_3558	NA	NA
UHGV-0195138_17	PHROG	phrog_8677	NA	unknown function
UHGV-0195138_17	UniRef90	UniRef90_A0A410Q2L2	NA	NA
UHGV-0195138_17	eggNOG-mapper	864563.HMPREF9166_0109	NA	NA
UHGV-0195138_17	Pfam	PF14192	NA	DUF4314
UHGV-0195138_17	Pfam	PF16468	NA	DUF5049
UHGV-0195138_17	Structural annotation	PF14192	NA	NA
UHGV-0195138_18	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0195138_18	UniRef90	UniRef90_A0A1C0BQL8	Terminase	NA
UHGV-0195138_18	eggNOG-mapper	720554.Clocl_3719	large subunit	NA
UHGV-0195138_18	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0195138_18	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0195138_18	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0195138_18	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0195138_19	PHROG	phrog_12	portal protein	head and packaging
UHGV-0195138_19	UniRef90	UniRef90_A0A1C0BQQ3	Phage portal protein	NA
UHGV-0195138_19	eggNOG-mapper	580327.Tthe_0791	TIGRFAM phage portal protein, HK97 family	NA
UHGV-0195138_19	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0195138_19	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0195138_19	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0195138_19	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0195138_20	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0195138_20	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0195138_20	UniRef90	UniRef90_A0A410Q2T8	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0195138_20	eggNOG-mapper	1211035.CD30_08255	Belongs to the peptidase S14 family	NA
UHGV-0195138_20	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0195138_20	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0195138_20	Structural annotation	PF00574, MF_00444, NF011089, COG0740	NA	NA
UHGV-0195138_21	PHROG	phrog_10	major head protein	head and packaging
UHGV-0195138_21	UniRef90	UniRef90_A0A6P1TRV1	Phage major capsid protein	NA
UHGV-0195138_21	eggNOG-mapper	1230342.CTM_16982	Phage major capsid protein, HK97 family	NA
UHGV-0195138_21	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0195138_21	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0195138_21	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0195138_21	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0195138_22	PHROG	phrog_12102	NA	unknown function
UHGV-0195138_22	UniRef90	UniRef90_A0A162TNB1	Head fiber protein	NA
UHGV-0195138_22	eggNOG-mapper	1410653.JHVC01000011_gene986	NA	NA
UHGV-0195138_23	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0195138_23	UniRef90	UniRef90_UPI000C07649C	head-tail connector protein	NA
UHGV-0195138_23	eggNOG-mapper	1235835.C814_01277	Phage gp6-like head-tail connector protein	NA
UHGV-0195138_23	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0195138_23	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0195138_23	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0195138_24	PHROG	phrog_25	head closure Hc1	connector
UHGV-0195138_24	UniRef90	UniRef90_A0A1C0BQJ7	Phage head-tail adapter protein	NA
UHGV-0195138_24	eggNOG-mapper	693746.OBV_41510	phage head-tail	NA
UHGV-0195138_24	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0195138_24	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0195138_24	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0195138_25	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0195138_25	UniRef90	UniRef90_A0A410Q2W7	HK97 gp10 family phage protein	NA
UHGV-0195138_25	eggNOG-mapper	1230342.CTM_17002	TIGRFAM phage protein, HK97 gp10 family	NA
UHGV-0195138_25	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0195138_25	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0195138_25	Structural annotation	TIGR01725	NA	NA
UHGV-0195138_26	PHROG	phrog_78	tail terminator	connector
UHGV-0195138_26	eggNOG-mapper	203119.Cthe_1624	NA	NA
UHGV-0195138_26	Structural annotation	PF05657, NF040576, COG3167	NA	NA
UHGV-0195138_27	PHROG	phrog_88	major tail protein	tail
UHGV-0195138_27	UniRef90	UniRef90_A0A410Q2K2	Phage tail protein	NA
UHGV-0195138_27	eggNOG-mapper	1230342.CTM_17012	phage major tail protein, phi13 family	NA
UHGV-0195138_27	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0195138_27	COG	COG5492	NA	NA
UHGV-0195138_27	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0195138_28	PHROG	phrog_2115	tail protein	tail
UHGV-0195138_28	eggNOG-mapper	1216932.CM240_1383	NA	NA
UHGV-0195138_28	Structural annotation	PF11836	NA	NA
UHGV-0195138_29	PHROG	phrog_10988	NA	unknown function
UHGV-0195138_29	eggNOG-mapper	693746.OBV_41460	NA	NA
UHGV-0195138_30	PHROG	phrog_5493	tail length tape measure protein	tail
UHGV-0195138_30	UniRef90	UniRef90_UPI0018A0813D	phage tail protein	NA
UHGV-0195138_30	eggNOG-mapper	1034347.CAHJ01000045_gene554	Phage tail tape measure protein TP901	NA
UHGV-0195138_30	COG	COG5185	Chromosome segregation protein NDC80, interacts with SMC proteins	NA
UHGV-0195138_30	Structural annotation	PF20155, COG5280	NA	NA
UHGV-0195138_31	PHROG	phrog_36410	NA	unknown function
UHGV-0195138_31	UniRef90	UniRef90_A0A4Q0I7U4	Phage tail family protein	NA
UHGV-0195138_31	eggNOG-mapper	431943.CKL_2630	Phage tail protein	NA
UHGV-0195138_31	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0195138_31	COG	COG4722	Phage-related protein YomH	NA
UHGV-0195138_31	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0195138_32	PHROG	phrog_538	minor tail protein	tail
UHGV-0195138_32	UniRef90	UniRef90_A0A0E3W2Z0	Siphovirus Gp37-like protein	NA
UHGV-0195138_32	eggNOG-mapper	431943.CKL_2629	Siphovirus ReqiPepy6 Gp37-like protein	NA
UHGV-0195138_32	Pfam	PF14594	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
UHGV-0195138_32	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0195138_33	PHROG	phrog_1220	head protein	head and packaging
UHGV-0195138_33	UniRef90	UniRef90_Q73EE6	Phage structural protein, truncation	NA
UHGV-0195138_33	eggNOG-mapper	431943.CKL_2628	COG NOG18825 non supervised orthologous group	NA
UHGV-0195138_33	Structural annotation	PF20747	NA	NA
UHGV-0195138_34	UniRef90	UniRef90_A0A0E4GAG5	Fibronectin, type III	NA
UHGV-0195138_34	eggNOG-mapper	1211035.CD30_08325	NA	NA
UHGV-0195138_34	Pfam	PF00041	Fibronectin type III domain	fn3
UHGV-0195138_35	PHROG	phrog_2308	NA	unknown function
UHGV-0195138_35	UniRef90	UniRef90_A0A349DBF8	RNA polymerase subunit sigma-70	NA
UHGV-0195138_35	eggNOG-mapper	397288.C806_00817	COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-0195138_35	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0195138_35	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0195138_35	Structural annotation	PF06056, COG2771	NA	NA
UHGV-0195138_36	PHROG	phrog_2996	NA	unknown function
UHGV-0195138_36	eggNOG-mapper	1121334.KB911068_gene2308	NA	NA
UHGV-0195138_36	Pfam	PF20612	SHOCT domain	SHOCT_2

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195138	Yes	38,393 bps	48.62%	100.00%	0.9287
UHGV-0297548	No	38,408 bps	48.63%	80.59%	0.9280