vOTU-047319

Overview

vOTU representative UHGV-0195661

No. of genomes 37

Genome length 65,250 bps

Completeness 100.00% (complete)

Host Phocaeicola plebeius A

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047319
Number of genomes	37
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00023 › vSUBFAM-00873 › vGENUS-01661 › vSUBGEN-33903 › vOTU-047319
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Bacteroidaceae › Phocaeicola › Phocaeicola plebeius A
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195661
BioSample	SAMN00791925
Genome length	65,250 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	76
CDS density	94.28%
tRNA count	4
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195661_2	PHROG	phrog_32516	NA	unknown function
UHGV-0195661_2	eggNOG-mapper	1349822.NSB1T_06475	NA	NA
UHGV-0195661_2	Structural annotation	PF11134, COG2706	NA	NA
UHGV-0195661_3	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-0195661_3	UniRef90	UniRef90_J9GPW1	NA	NA
UHGV-0195661_3	eggNOG-mapper	943335.F4N9T4_9CAUD	Cytidine and deoxycytidylate deaminase zinc-binding region	NA
UHGV-0195661_3	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0195661_3	Structural annotation	PF18909, PF08141, MF_00667, TIGR02861	NA	NA
UHGV-0195661_4	PHROG	phrog_874	NA	unknown function
UHGV-0195661_4	eggNOG-mapper	1121098.HMPREF1534_01095	NA	NA
UHGV-0195661_4	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0195661_6	UniRef90	UniRef90_A0A6I0G804	NA	NA
UHGV-0195661_6	eggNOG-mapper	411901.BACCAC_01195	NA	NA
UHGV-0195661_6	Pfam	PF04448	NA	DUF551
UHGV-0195661_6	Structural annotation	PF04448	NA	NA
UHGV-0195661_7	Structural annotation	PF03127	NA	NA
UHGV-0195661_9	PHROG	phrog_32914	NA	unknown function
UHGV-0195661_13	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0195661_13	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0195661_13	UniRef90	UniRef90_A0A6N3EY17	Methyltransferase	NA
UHGV-0195661_13	eggNOG-mapper	1268240.ATFI01000007_gene431	DNA methylase	NA
UHGV-0195661_13	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-0195661_13	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0195661_13	COG	COG0863	DNA modification methylase	NA
UHGV-0195661_13	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-0195661_16	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0195661_16	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0195661_16	UniRef90	UniRef90_A0A679HI48	AAA_5 domain-containing protein	NA
UHGV-0195661_16	eggNOG-mapper	411901.BACCAC_01187	DNA-dependent DNA replication	NA
UHGV-0195661_16	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0195661_16	Structural annotation	PF00308, MF_01919, NF005931, COG1484	NA	NA
UHGV-0195661_17	PHROG	phrog_19415	NA	unknown function
UHGV-0195661_17	Pfam	PF19808	NA	DUF6291
UHGV-0195661_17	Structural annotation	PF19808	NA	NA
UHGV-0195661_18	PHROG	phrog_824	NA	unknown function
UHGV-0195661_18	UniRef90	UniRef90_UPI0019568853	VRR-NUC domain-containing protein	NA
UHGV-0195661_18	eggNOG-mapper	411901.BACCAC_01208	NA	NA
UHGV-0195661_18	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0195661_19	PHROG	phrog_35807	NA	unknown function
UHGV-0195661_19	UniRef90	UniRef90_A0A831NIX0	RNA polymerase subunit sigma	NA
UHGV-0195661_19	eggNOG-mapper	357276.EL88_11505	RNA polymerase activity	NA
UHGV-0195661_19	COG	COG0085	DNA-directed RNA polymerase, beta subunit/140 kD subunit	NA
UHGV-0195661_19	Structural annotation	PF14902	NA	NA
UHGV-0195661_20	UniRef90	UniRef90_A0A5M5DX18	Nmad5 domain-containing protein	NA
UHGV-0195661_20	Pfam	PF18757	Nucleotide modification associated domain 5	Nmad5
UHGV-0195661_20	Structural annotation	PF18757	NA	NA
UHGV-0195661_21	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0195661_21	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0195661_21	UniRef90	UniRef90_UPI000E5CF84D	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0195661_21	eggNOG-mapper	762982.HMPREF9442_01221	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0195661_21	PADLOC	BrxP_00001	BrxP	BREX
UHGV-0195661_21	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0195661_21	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0195661_21	Structural annotation	PF01507, MF_00063, NF002537, COG0175	NA	NA
UHGV-0195661_22	UniRef90	UniRef90_UPI001F355867	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0195661_22	eggNOG-mapper	762982.HMPREF9442_01221	Phosphoadenosine phosphosulfate reductase family	NA
UHGV-0195661_22	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0195661_23	UniRef90	UniRef90_A0A412BMF2	HNHc domain-containing protein	NA
UHGV-0195661_23	eggNOG-mapper	1347393.HG726022_gene3599	HNH nucleases	NA
UHGV-0195661_23	Pfam	PF13391	HNH endonuclease	HNH_2
UHGV-0195661_25	KOfam	K14440	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	NA
UHGV-0195661_25	PHROG	phrog_62	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0195661_25	UniRef90	UniRef90_UPI00192104D4	DEAD/DEAH box helicase	NA
UHGV-0195661_25	eggNOG-mapper	563031.HMPREF0666_01118	SNF2 family N-terminal domain	NA
UHGV-0195661_25	PADLOC	ZorD1_00007	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
UHGV-0195661_25	Pfam	PF00176	SNF2-related domain	SNF2-rel_dom
UHGV-0195661_25	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0195661_25	COG	COG0553	Superfamily II DNA or RNA helicase, SNF2 family	NA
UHGV-0195661_25	Structural annotation	PF00176, PF00271, MF_01821, NF041790, COG0553	NA	NA
UHGV-0195661_26	PHROG	phrog_319	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0195661_26	UniRef90	UniRef90_UPI00076034E7	NA	NA
UHGV-0195661_26	eggNOG-mapper	1046714.AMRX01000006_gene3162	NA	NA
UHGV-0195661_26	Pfam	PF07105	NA	DUF1367
UHGV-0195661_26	Structural annotation	PF07105	NA	NA
UHGV-0195661_27	PHROG	phrog_412	exonuclease VIII	DNA, RNA and nucleotide metabolism
UHGV-0195661_27	UniRef90	UniRef90_UPI00076095A9	PD-(D/E)XK nuclease-like domain-containing protein	NA
UHGV-0195661_27	eggNOG-mapper	1121097.JCM15093_2720	NA	NA
UHGV-0195661_27	Structural annotation	PF06023, MF_03030, TIGR01896, COG2887	NA	NA
UHGV-0195661_28	eggNOG-mapper	484018.BACPLE_02411	NA	NA
UHGV-0195661_29	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0195661_29	UniRef90	UniRef90_UPI001921A92D	recombinase RecT	NA
UHGV-0195661_29	eggNOG-mapper	563031.HMPREF0666_01115	RecT family	NA
UHGV-0195661_29	Pfam	PF03837	RecT family	RecT
UHGV-0195661_29	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0195661_29	Structural annotation	PF03837, NF007351, COG3723	NA	NA
UHGV-0195661_31	PHROG	phrog_37809	NA	unknown function
UHGV-0195661_31	eggNOG-mapper	1236514.BAKL01000015_gene1654	NA	NA
UHGV-0195661_34	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0195661_34	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0195661_34	UniRef90	UniRef90_A0A3E4N394	Helix-turn-helix domain-containing protein	NA
UHGV-0195661_34	eggNOG-mapper	1268240.ATFI01000007_gene448	Peptidase S24-like	NA
UHGV-0195661_34	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0195661_34	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0195661_34	Structural annotation	PF00717, PF13560, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-0195661_37	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0195661_37	PHROG	phrog_1	integrase	integration and excision
UHGV-0195661_37	UniRef90	UniRef90_R5V738	Core-binding (CB) domain-containing protein	NA
UHGV-0195661_37	eggNOG-mapper	411901.BACCAC_01099	Belongs to the 'phage' integrase family	NA
UHGV-0195661_37	Pfam	PF17293	Arm DNA-binding domain	Arm-DNA-bind_5
UHGV-0195661_37	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0195661_37	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0195661_37	Structural annotation	PF00589, PF17293, MF_01808, TIGR02224, COG4973	NA	NA
UHGV-0195661_38	UniRef90	UniRef90_UPI001C5D0B25	helix-turn-helix domain-containing protein	NA
UHGV-0195661_38	Structural annotation	PF02796, COG3415	NA	NA
UHGV-0195661_39	UniRef90	UniRef90_UPI0019228279	DNA breaking-rejoining protein	NA
UHGV-0195661_41	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0195661_42	eggNOG-mapper	1121098.HMPREF1534_01130	NA	NA
UHGV-0195661_44	PHROG	phrog_14770	NA	unknown function
UHGV-0195661_44	UniRef90	UniRef90_A0A4S2FXN2	Ftsk_gamma domain-containing protein	NA
UHGV-0195661_44	eggNOG-mapper	1121098.HMPREF1534_01128	CRISPR-associated helicase, Cas3	NA
UHGV-0195661_44	Pfam	PF18827	Large polyvalent protein-associated domain 14	LPD14
UHGV-0195661_44	Pfam	PF18823	Inorganic Pyrophosphatase	InPase
UHGV-0195661_44	Pfam	PF13872	P-loop containing NTP hydrolase pore-1	AAA_34
UHGV-0195661_44	Pfam	PF13871	C-terminal domain on Strawberry notch homologue	Helicase_C_4
UHGV-0195661_44	Pfam	PF18857	Large polyvalent protein associated domain 38	LPD38
UHGV-0195661_44	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0195661_45	PHROG	phrog_156	portal protein	head and packaging
UHGV-0195661_45	eggNOG-mapper	1349822.NSB1T_06480	NA	NA
UHGV-0195661_45	Structural annotation	PF16510, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0195661_46	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0195661_46	UniRef90	UniRef90_A0A2V2D167	Terminase	NA
UHGV-0195661_46	eggNOG-mapper	1349822.NSB1T_06540	Terminase	NA
UHGV-0195661_46	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0195661_46	Structural annotation	PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0195661_47	UniRef90	UniRef90_R5V7N0	Rhomboid domain-containing protein	NA
UHGV-0195661_47	Pfam	PF01694	Rhomboid family	Rhomboid
UHGV-0195661_47	COG	COG0705	Membrane-associated serine protease, rhomboid family	NA
UHGV-0195661_48	eggNOG-mapper	742726.HMPREF9448_00598	NA	NA
UHGV-0195661_49	PHROG	phrog_22323	NA	unknown function
UHGV-0195661_49	eggNOG-mapper	742817.HMPREF9449_01784	NA	NA
UHGV-0195661_50	PHROG	phrog_26635	NA	unknown function
UHGV-0195661_50	eggNOG-mapper	742817.HMPREF9449_01785	NA	NA
UHGV-0195661_50	Structural annotation	PF17236, MF_04133, TIGR01554, COG4653	NA	NA
UHGV-0195661_52	PHROG	phrog_22135	NA	unknown function
UHGV-0195661_52	eggNOG-mapper	1347393.HG726020_gene1827	NA	NA
UHGV-0195661_53	PHROG	phrog_38044	NA	unknown function
UHGV-0195661_53	eggNOG-mapper	657309.BXY_05160	NA	NA
UHGV-0195661_54	eggNOG-mapper	1121098.HMPREF1534_01117	NA	NA
UHGV-0195661_55	PHROG	phrog_15610	protease	other
UHGV-0195661_55	UniRef90	UniRef90_A0A0J6CFE9	Membrane protein	NA
UHGV-0195661_55	eggNOG-mapper	667015.Bacsa_1191	NA	NA
UHGV-0195661_56	eggNOG-mapper	411901.BACCAC_01118	NA	NA
UHGV-0195661_56	Structural annotation	PF14607, NF038393	NA	NA
UHGV-0195661_59	Structural annotation	PF07603	NA	NA
UHGV-0195661_61	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0195661_61	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0195661_61	UniRef90	UniRef90_UPI00195D711B	RNA-directed DNA polymerase	NA
UHGV-0195661_61	eggNOG-mapper	657309.BXY_08080	COG COG3344 Retron-type reverse transcriptase	NA
UHGV-0195661_61	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0195661_61	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0195661_61	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0195661_61	Structural annotation	PF00078, MF_04065, TIGR04416, COG3344	NA	NA
UHGV-0195661_63	PHROG	phrog_27545	NA	unknown function
UHGV-0195661_63	UniRef90	UniRef90_R6ELD6	Glycosyl hydrolase family 18 family protein	NA
UHGV-0195661_63	eggNOG-mapper	411471.SUBVAR_06976	NA	NA
UHGV-0195661_63	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0195661_65	Structural annotation	PF20617	NA	NA
UHGV-0195661_66	KOfam	K11618	liaR; two-component system, NarL family, response regulator LiaR	NA
UHGV-0195661_66	UniRef90	UniRef90_A0A2V1IW66	LuxR family transcriptional regulator	NA
UHGV-0195661_66	eggNOG-mapper	1121396.KB893095_gene4387	PFAM response regulator receiver	NA
UHGV-0195661_66	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-0195661_66	COG	COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	NA
UHGV-0195661_66	Structural annotation	PF00196, MF_00674, COG2771	NA	NA
UHGV-0195661_69	Structural annotation	PF10628	NA	NA
UHGV-0195661_73	UniRef90	UniRef90_UPI0018A03895	phage holin family protein	NA
UHGV-0195661_73	eggNOG-mapper	1121100.JCM6294_559	NA	NA
UHGV-0195661_73	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0195661_73	Structural annotation	PF05105, NF035928, COG4824	NA	NA
UHGV-0195661_74	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0195661_74	PHROG	phrog_822	amidase	lysis
UHGV-0195661_74	UniRef90	UniRef90_A0A1Y4K306	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0195661_74	eggNOG-mapper	679191.HMPREF9018_0443	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0195661_74	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0195661_74	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0195661_74	Structural annotation	PF01510, MF_04111, NF008758, COG3023	NA	NA
UHGV-0195661_76	PHROG	phrog_19255	NA	unknown function

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195661	Yes	65,250 bps	39.12%	100.00%	0.9725
UHGV-1435140	No	73,998 bps	39.36%	99.90%	0.9706
UHGV-1546976	No	73,792 bps	39.36%	99.90%	0.9700
UHGV-0122970	No	72,102 bps	39.35%	99.90%	0.9745
UHGV-1431043	No	71,557 bps	40.52%	99.90%	0.9709
UHGV-0124277	No	68,695 bps	38.89%	99.90%	0.9680
UHGV-0352932	No	67,669 bps	39.49%	99.75%	0.9715
UHGV-1385411	No	65,357 bps	39.11%	96.34%	0.9692
UHGV-0167690	No	65,018 bps	39.22%	95.84%	0.9748
UHGV-1495592	No	64,567 bps	39.57%	95.17%	0.9747
UHGV-0232334	No	63,491 bps	39.77%	93.59%	0.9748
UHGV-0272389	No	60,301 bps	39.26%	88.89%	0.9760
UHGV-1448685	No	58,950 bps	39.53%	86.89%	0.9746
UHGV-1501813	No	56,843 bps	39.58%	83.79%	0.9729
UHGV-1451707	No	54,344 bps	39.21%	80.10%	0.9755
UHGV-1443947	No	38,474 bps	39.47%	56.71%	0.9729
UHGV-1446195	No	38,417 bps	39.49%	56.63%	0.9743
UHGV-1380838	No	41,206 bps	38.80%	54.85%	0.9728
UHGV-0288219	No	35,729 bps	38.56%	52.67%	0.9764
UHGV-1420681	No	34,027 bps	38.42%	50.16%	0.9736
UHGV-1821105	No	31,461 bps	40.06%	46.37%	0.9722
UHGV-1678478	No	20,914 bps	40.95%	30.83%	0.9685
UHGV-1743343	No	20,695 bps	41.92%	30.51%	0.8613
UHGV-1777081	No	18,585 bps	39.00%	27.39%	0.9762
UHGV-1583558	No	17,873 bps	38.47%	26.35%	0.9670
UHGV-1783776	No	16,694 bps	41.29%	24.61%	0.9482
UHGV-2149778	No	16,025 bps	39.04%	23.62%	0.9743
UHGV-1635675	No	15,459 bps	38.55%	22.79%	0.9722
UHGV-1813629	No	14,923 bps	42.17%	22.00%	0.9076
UHGV-1814118	No	14,783 bps	38.69%	21.79%	0.9518
UHGV-1730178	No	14,099 bps	38.73%	20.78%	0.9775
UHGV-1810729	No	12,901 bps	37.06%	19.02%	0.9748
UHGV-1813900	No	12,805 bps	38.91%	18.88%	0.9665
UHGV-1702449	No	10,976 bps	40.38%	18.38%	0.9767
UHGV-1590285	No	11,682 bps	39.73%	17.22%	0.9683
UHGV-2106334	No	10,466 bps	38.95%	15.43%	0.9673
UHGV-1616186	No	10,546 bps	39.15%	11.00%	0.9689