vOTU-047326

Overview

vOTU representative UHGV-0195822

No. of genomes 6

Genome length 45,846 bps

Completeness 100.00% (complete)

Host CAG-103

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047326
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00187 › vGENUS-00218 › vSUBGEN-10552 › vOTU-047326
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-103
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195822
BioSample	SAMN06164759
Genome length	45,846 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	66
CDS density	90.49%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195822_1	KOfam	K00986	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	NA
UHGV-0195822_1	PHROG	phrog_1423	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UHGV-0195822_1	UniRef90	UniRef90_H1CEN0	Reverse transcriptase domain-containing protein	NA
UHGV-0195822_1	eggNOG-mapper	1410650.JHWL01000003_gene2820	Reverse transcriptase	NA
UHGV-0195822_1	PADLOC	icity0040	RT (reverse transcriptase)	CRISPR-CAS
UHGV-0195822_1	Pfam	PF00078	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
UHGV-0195822_1	COG	COG3344	Retron-type reverse transcriptase	NA
UHGV-0195822_1	Structural annotation	PF00078, MF_01390, TIGR04416, COG3344	NA	NA
UHGV-0195822_3	eggNOG-mapper	1235797.C816_04174	NA	NA
UHGV-0195822_3	Structural annotation	PF14600	NA	NA
UHGV-0195822_4	PHROG	phrog_1863	NA	unknown function
UHGV-0195822_4	eggNOG-mapper	748224.HMPREF9436_01412	NA	NA
UHGV-0195822_5	PHROG	phrog_13256	NA	unknown function
UHGV-0195822_5	eggNOG-mapper	1226322.HMPREF1545_00166	NA	NA
UHGV-0195822_6	UniRef90	UniRef90_H1CEM5	SH3b domain-containing protein	NA
UHGV-0195822_6	eggNOG-mapper	1235797.C816_02842	mannosyl-glycoprotein	NA
UHGV-0195822_6	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0195822_6	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0195822_6	Structural annotation	PF05382, NF033743	NA	NA
UHGV-0195822_9	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0195822_9	PHROG	phrog_95	integrase	integration and excision
UHGV-0195822_9	UniRef90	UniRef90_UPI00164E9A6A	recombinase family protein	NA
UHGV-0195822_9	eggNOG-mapper	663278.Ethha_0939	NA	NA
UHGV-0195822_9	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0195822_9	Pfam	PF07508	Recombinase	Recombinase
UHGV-0195822_9	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0195822_9	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0195822_9	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0195822_10	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0195822_10	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0195822_10	UniRef90	UniRef90_UPI00164CF79B	S24 family peptidase	NA
UHGV-0195822_10	eggNOG-mapper	500633.CLOHIR_00339	Peptidase S24-like	NA
UHGV-0195822_10	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195822_10	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0195822_10	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0195822_10	Structural annotation	PF00717, PF12844, MF_00015, TIGR00498, COG1974	NA	NA
UHGV-0195822_13	PHROG	phrog_37900	NA	unknown function
UHGV-0195822_13	UniRef90	UniRef90_H1CET4	NA	NA
UHGV-0195822_13	eggNOG-mapper	471855.Shel_21010	serine threonine protein kinase	NA
UHGV-0195822_13	Pfam	PF19789	NA	DUF6273
UHGV-0195822_13	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0195822_13	Structural annotation	PF19789	NA	NA
UHGV-0195822_15	PHROG	phrog_843	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0195822_15	UniRef90	UniRef90_UPI0018982E6D	Holliday junction resolvase RecU	NA
UHGV-0195822_15	eggNOG-mapper	1449050.JNLE01000003_gene3909	Recombination protein U	NA
UHGV-0195822_15	Structural annotation	PF03838, MF_01490, NF002581, COG1591	NA	NA
UHGV-0195822_16	KOfam	K18959	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	NA
UHGV-0195822_16	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0195822_16	UniRef90	UniRef90_H1CET1	Helicase ATP-binding domain-containing protein	NA
UHGV-0195822_16	eggNOG-mapper	1449050.JNLE01000003_gene3908	Type III restriction protein res subunit	NA
UHGV-0195822_16	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0195822_16	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0195822_16	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0195822_16	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0195822_16	Structural annotation	PF04851, PF16203, MF_01489, TIGR00603, COG1061	NA	NA
UHGV-0195822_17	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0195822_17	UniRef90	UniRef90_UPI001D05E931	DNA cytosine methyltransferase	NA
UHGV-0195822_17	eggNOG-mapper	397290.C810_01487	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0195822_17	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0195822_17	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0195822_18	PHROG	phrog_1252	DNA polymerase	DNA, RNA and nucleotide metabolism
UHGV-0195822_18	UniRef90	UniRef90_UPI00189DB5D1	DNA polymerase elongation subunit (family B)	NA
UHGV-0195822_18	eggNOG-mapper	1121866.AUGK01000003_gene1403	DNA replication proofreading	NA
UHGV-0195822_18	COG	COG0417	DNA polymerase B elongation subunit	NA
UHGV-0195822_18	Structural annotation	PF08490, MF_04100, TIGR00592, COG0417	NA	NA
UHGV-0195822_19	UniRef90	UniRef90_A0A358PLH6	PAPS_reduct domain-containing protein (Fragment)	NA
UHGV-0195822_19	eggNOG-mapper	1235835.C814_01169	NA	NA
UHGV-0195822_19	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0195822_20	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0195822_20	UniRef90	UniRef90_UPI001A9A8367	ERF family protein	NA
UHGV-0195822_20	eggNOG-mapper	936572.HMPREF1148_0677	ERF superfamily	NA
UHGV-0195822_20	Pfam	PF04404	ERF superfamily	ERF
UHGV-0195822_20	Structural annotation	PF04404	NA	NA
UHGV-0195822_21	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195822_21	UniRef90	UniRef90_H1CES3	YqaJ domain-containing protein	NA
UHGV-0195822_21	eggNOG-mapper	1121866.AUGK01000003_gene1405	YqaJ viral recombinase family	NA
UHGV-0195822_21	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0195822_21	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0195822_21	Structural annotation	PF09588, TIGR03033, COG5377	NA	NA
UHGV-0195822_22	AcrCatalog	cluster_73853	NA	NA
UHGV-0195822_24	Structural annotation	PF05037, NF005674	NA	NA
UHGV-0195822_25	PHROG	phrog_1485	NA	unknown function
UHGV-0195822_25	UniRef90	UniRef90_UPI00189AA6A6	NA	NA
UHGV-0195822_25	eggNOG-mapper	1415774.U728_1099	NA	NA
UHGV-0195822_25	Pfam	PF07659	Nucleotide modification associated domain 1	DUF1599
UHGV-0195822_26	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-0195822_26	UniRef90	UniRef90_UPI001899D94E	nucleoside triphosphate pyrophosphohydrolase family protein	NA
UHGV-0195822_26	eggNOG-mapper	428125.CLOLEP_01391	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-0195822_26	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-0195822_26	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-0195822_26	Structural annotation	PF03819, MF_01020, NF001613, COG0140	NA	NA
UHGV-0195822_27	KOfam	K03698	cbf, cbf1; 3'-5' exoribonuclease [EC:3.1.-.-]	NA
UHGV-0195822_27	PHROG	phrog_28876	metal-dependent phosphohydrolase	other
UHGV-0195822_27	UniRef90	UniRef90_A0A1C5MUY3	Predicted HD-superfamily hydrolase	NA
UHGV-0195822_27	eggNOG-mapper	1235800.C819_00499	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-0195822_27	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0195822_27	Structural annotation	PF01966, MF_01427, NF010007, COG3481	NA	NA
UHGV-0195822_28	KOfam	K03465	thyX, thy1; thymidylate synthase (FAD) [EC:2.1.1.148]	NA
UHGV-0195822_28	PHROG	phrog_85	thymidylate synthase	DNA, RNA and nucleotide metabolism
UHGV-0195822_28	UniRef90	UniRef90_UPI001898977C	FAD-dependent thymidylate synthase	NA
UHGV-0195822_28	eggNOG-mapper	1336241.JAEB01000001_gene147	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant	NA
UHGV-0195822_28	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0195822_28	NCBIFam	TIGR02170.1	FAD-dependent thymidylate synthase	NA
UHGV-0195822_28	COG	COG1351	Thymidylate synthase ThyX, FAD-dependent family	NA
UHGV-0195822_28	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0195822_30	PHROG	phrog_30550	NA	unknown function
UHGV-0195822_30	UniRef90	UniRef90_A0A2N2CRJ1	Hydrolase_2 domain-containing protein	NA
UHGV-0195822_30	eggNOG-mapper	1519439.JPJG01000077_gene920	Cell Wall Hydrolase	NA
UHGV-0195822_31	PHROG	phrog_1829	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0195822_31	UniRef90	UniRef90_H1CER3	PriCT_1 domain-containing protein	NA
UHGV-0195822_31	eggNOG-mapper	1121866.AUGK01000003_gene1409	Phage plasmid primase, P4 family domain protein	NA
UHGV-0195822_31	Pfam	PF08708	Primase C terminal 1 (PriCT-1)	PriCT_1
UHGV-0195822_31	COG	COG4983	Primase-polymerase (Primpol) domain protein	NA
UHGV-0195822_31	Structural annotation	PF08708, PF09250, COG4983	NA	NA
UHGV-0195822_32	KOfam	K07171	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	NA
UHGV-0195822_32	PHROG	phrog_1936	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UHGV-0195822_32	UniRef90	UniRef90_UPI001D0750B0	type II toxin-antitoxin system PemK/MazF family toxin	NA
UHGV-0195822_32	eggNOG-mapper	1071400.LBUCD034_1631	Toxic component of a toxin-antitoxin (TA) module	NA
UHGV-0195822_32	Pfam	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
UHGV-0195822_32	COG	COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	NA
UHGV-0195822_32	Structural annotation	PF02452, NF007386, COG2337	NA	NA
UHGV-0195822_33	KOfam	K06919	K06919; putative DNA primase/helicase	NA
UHGV-0195822_33	PHROG	phrog_1156	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0195822_33	UniRef90	UniRef90_H1CER1	Phage/plasmid primase, P4 family domain-containing protein	NA
UHGV-0195822_33	eggNOG-mapper	1304875.JAFZ01000002_gene212	D5 N terminal like	NA
UHGV-0195822_33	Pfam	PF08706	D5 N terminal like	D5_N
UHGV-0195822_33	Pfam	PF19263	NA	DUF5906
UHGV-0195822_33	Pfam	PF03288	Poxvirus D5 protein-like	Pox_D5
UHGV-0195822_33	NCBIFam	TIGR01613.1	phage/plasmid primase, P4 family	NA
UHGV-0195822_33	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0195822_33	Structural annotation	PF08706, PF05272, PF02257, MF_04000, NF005477, COG3378	NA	NA
UHGV-0195822_35	PHROG	phrog_22389	NA	unknown function
UHGV-0195822_35	Structural annotation	PF01402, COG4710	NA	NA
UHGV-0195822_39	PHROG	phrog_606	terminase small subunit	head and packaging
UHGV-0195822_39	UniRef90	UniRef90_UPI001C012D23	DNA-packaging protein	NA
UHGV-0195822_39	eggNOG-mapper	877421.AUJT01000054_gene66	NA	NA
UHGV-0195822_39	Pfam	PF16677	DNA-packaging protein gp3	GP3_package
UHGV-0195822_39	Structural annotation	PF16677	NA	NA
UHGV-0195822_41	PHROG	phrog_4264	NA	unknown function
UHGV-0195822_41	eggNOG-mapper	442493.A8E2H1_BPPHE	NA	NA
UHGV-0195822_42	Structural annotation	PF13742, MF_01959, NF009635, COG3390	NA	NA
UHGV-0195822_44	UniRef90	UniRef90_UPI001C02D1DF	winged helix-turn-helix transcriptional regulator	NA
UHGV-0195822_44	Pfam	PF13412	Winged helix-turn-helix DNA-binding	HTH_24
UHGV-0195822_44	Structural annotation	PF20075, TIGR02612, COG1396	NA	NA
UHGV-0195822_45	UniRef90	UniRef90_A0A0U9HC82	Anti-repressor protein	NA
UHGV-0195822_45	eggNOG-mapper	1151292.QEW_2076	BRO family, N-terminal domain	NA
UHGV-0195822_45	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0195822_45	Structural annotation	PF02498, TIGR02681, COG3617	NA	NA
UHGV-0195822_46	Structural annotation	PF13744, TIGR03070, COG1396	NA	NA
UHGV-0195822_47	KOfam	K14060	pinR; putative DNA-invertase from lambdoid prophage Rac	NA
UHGV-0195822_47	PHROG	phrog_125	DNA invertase	DNA, RNA and nucleotide metabolism
UHGV-0195822_47	UniRef90	UniRef90_UPI001C023A41	recombinase family protein	NA
UHGV-0195822_47	eggNOG-mapper	1408423.JHYA01000001_gene988	Resolvase, N terminal domain	NA
UHGV-0195822_47	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0195822_47	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0195822_47	Structural annotation	PF00239, PF02796, MF_00489, NF009949, COG1961	NA	NA
UHGV-0195822_48	Structural annotation	PF19569, COG3427	NA	NA
UHGV-0195822_49	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0195822_49	UniRef90	UniRef90_UPI00164E3A67	phage terminase large subunit	NA
UHGV-0195822_49	eggNOG-mapper	1298920.KI911353_gene2682	TIGRFAM Phage	NA
UHGV-0195822_49	NCBIFam	TIGR01630.1	phage terminase large subunit	NA
UHGV-0195822_49	COG	COG5410	NA	NA
UHGV-0195822_49	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0195822_50	PHROG	phrog_64	portal protein	head and packaging
UHGV-0195822_50	UniRef90	UniRef90_UPI001C02F349	phage portal protein	NA
UHGV-0195822_50	eggNOG-mapper	1123263.AUKY01000015_gene1609	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0195822_50	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0195822_50	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0195822_53	PHROG	phrog_1328	major head protein	head and packaging
UHGV-0195822_53	UniRef90	UniRef90_UPI00164DD2D5	NA	NA
UHGV-0195822_53	eggNOG-mapper	665956.HMPREF1032_03619	NA	NA
UHGV-0195822_53	Pfam	PF17236	NA	DUF5309
UHGV-0195822_53	Structural annotation	PF17236, MF_04119, NF041162, COG4653	NA	NA
UHGV-0195822_54	UniRef90	UniRef90_UPI00164E20D5	phage head-tail connector protein	NA
UHGV-0195822_54	eggNOG-mapper	1298920.KI911353_gene2658	NA	NA
UHGV-0195822_54	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0195822_54	Structural annotation	TIGR01560	NA	NA
UHGV-0195822_55	eggNOG-mapper	1121866.AUGK01000003_gene1432	NA	NA
UHGV-0195822_56	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-0195822_57	Structural annotation	PF06141, TIGR02367, COG3167	NA	NA
UHGV-0195822_58	PHROG	phrog_158	major tail protein	tail
UHGV-0195822_58	UniRef90	UniRef90_UPI00164D954A	phage tail protein	NA
UHGV-0195822_58	eggNOG-mapper	1232453.BAIF02000058_gene1634	NA	NA
UHGV-0195822_58	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0195822_59	UniRef90	UniRef90_UPI00164D364F	NA	NA
UHGV-0195822_59	eggNOG-mapper	469596.HMPREF9488_01311	NA	NA
UHGV-0195822_59	Pfam	PF16478	NA	DUF5055
UHGV-0195822_59	Structural annotation	PF16478	NA	NA
UHGV-0195822_61	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0195822_61	UniRef90	UniRef90_A0A1C6L0H4	Phage-related protein	NA
UHGV-0195822_61	eggNOG-mapper	1121866.AUGK01000003_gene1437	phage tail tape measure protein	NA
UHGV-0195822_61	COG	COG1280	Threonine/homoserine/homoserine lactone efflux protein	NA
UHGV-0195822_61	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0195822_62	PHROG	phrog_1194	NA	unknown function
UHGV-0195822_62	eggNOG-mapper	1298920.KI911353_gene4840	NA	NA
UHGV-0195822_62	Pfam	PF20458	NA	DUF6711
UHGV-0195822_62	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0195822_63	PHROG	phrog_13879	NA	unknown function
UHGV-0195822_63	eggNOG-mapper	665956.HMPREF1032_03630	NA	NA
UHGV-0195822_63	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0195822_64	PHROG	phrog_18725	NA	unknown function
UHGV-0195822_64	eggNOG-mapper	1226322.HMPREF1545_00062	NA	NA
UHGV-0195822_65	PHROG	phrog_37900	NA	unknown function
UHGV-0195822_65	UniRef90	UniRef90_UPI00164D57E4	NA	NA
UHGV-0195822_65	eggNOG-mapper	1519439.JPJG01000060_gene1894	NA	NA
UHGV-0195822_65	Pfam	PF19789	NA	DUF6273
UHGV-0195822_65	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0195822_65	Structural annotation	PF19789, PF14686, TIGR04183, COG2512	NA	NA
UHGV-0195822_66	PHROG	phrog_30516	NA	unknown function
UHGV-0195822_66	Structural annotation	PF05635, NF008911	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195822	Yes	45,846 bps	50.21%	100.00%	0.9794
UHGV-0166615	No	45,952 bps	50.22%	99.90%	0.9785
UHGV-0369894	No	45,833 bps	50.20%	99.80%	0.9768
UHGV-1454996	No	45,855 bps	50.24%	99.79%	0.9763
UHGV-1727913	No	21,329 bps	49.92%	46.09%	0.9786
UHGV-1736888	No	13,329 bps	51.77%	29.97%	0.9820