vOTU-047327

Overview

vOTU representative UHGV-0195828

No. of genomes 5

Genome length 29,672 bps

Completeness 100.00% (complete)

Host Ruminococcus C

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047327
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-02806 › vGENUS-09254 › vSUBGEN-10553 › vOTU-047327
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Ruminococcus C
Host range breadth	Genus
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195828
BioSample	NA
Genome length	29,672 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	45
CDS density	92.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195828_1	KOfam	K07273	acm; lysozyme	NA
UHGV-0195828_1	PHROG	phrog_291	endolysin	lysis
UHGV-0195828_1	UniRef90	UniRef90_U2K8D9	Glycosyl hydrolase family 25	NA
UHGV-0195828_1	eggNOG-mapper	411473.RUMCAL_01945	hydrolase, family 25	NA
UHGV-0195828_1	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0195828_1	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0195828_1	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0195828_1	Structural annotation	PF01183, PF08291, NF007557, COG3757, COG3108	NA	NA
UHGV-0195828_2	PHROG	phrog_1129	holin	lysis
UHGV-0195828_2	UniRef90	UniRef90_A0A416MDZ9	Enolase	NA
UHGV-0195828_2	eggNOG-mapper	411473.RUMCAL_01944	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0195828_2	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0195828_2	Structural annotation	PF06946	NA	NA
UHGV-0195828_4	PHROG	phrog_35590	NA	unknown function
UHGV-0195828_4	eggNOG-mapper	411473.RUMCAL_00613	Collagen triple helix repeat (20 copies)	NA
UHGV-0195828_4	COG	COG2931	Ca2+-binding protein, RTX toxin-related	NA
UHGV-0195828_4	Structural annotation	PF07675, NF038128	NA	NA
UHGV-0195828_5	KOfam	K08131	COL9A; collagen type IX alpha	NA
UHGV-0195828_5	PHROG	phrog_25888	NA	unknown function
UHGV-0195828_5	UniRef90	UniRef90_U2KR58	Collagen triple helix repeat protein	NA
UHGV-0195828_5	eggNOG-mapper	411473.RUMCAL_01941	cell adhesion	NA
UHGV-0195828_5	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0195828_5	COG	COG3468	Autotransporter adhesin AidA	NA
UHGV-0195828_5	Structural annotation	PF10651	NA	NA
UHGV-0195828_6	Structural annotation	PF14594, TIGR03361, COG3500	NA	NA
UHGV-0195828_8	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0195828_8	UniRef90	UniRef90_R7FII5	PhageMin_Tail domain-containing protein	NA
UHGV-0195828_8	eggNOG-mapper	411473.RUMCAL_01938	tail tape measure protein, TP901	NA
UHGV-0195828_8	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0195828_8	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0195828_8	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0195828_9	PHROG	phrog_706	NA	unknown function
UHGV-0195828_9	UniRef90	UniRef90_B0NG03	Bacteriophage Gp15 protein	NA
UHGV-0195828_9	eggNOG-mapper	411473.RUMCAL_01937	Bacteriophage Gp15 protein	NA
UHGV-0195828_9	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0195828_9	Structural annotation	PF06854	NA	NA
UHGV-0195828_10	PHROG	phrog_4450	NA	unknown function
UHGV-0195828_10	UniRef90	UniRef90_A0A355D9Y6	AP endonuclease	NA
UHGV-0195828_10	eggNOG-mapper	641112.ACOK01000073_gene2902	NA	NA
UHGV-0195828_10	Pfam	PF20378	NA	DUF6673
UHGV-0195828_10	Structural annotation	PF20378	NA	NA
UHGV-0195828_11	PHROG	phrog_3099	NA	unknown function
UHGV-0195828_11	eggNOG-mapper	411473.RUMCAL_01935	NA	NA
UHGV-0195828_11	Structural annotation	PF08813, TIGR02126, COG5437	NA	NA
UHGV-0195828_12	PHROG	phrog_3266	tail completion	connector
UHGV-0195828_12	UniRef90	UniRef90_A0A355UZ60	Chloramphenicol resistance protein	NA
UHGV-0195828_12	eggNOG-mapper	411473.RUMCAL_01934	NA	NA
UHGV-0195828_12	Structural annotation	PF12691	NA	NA
UHGV-0195828_13	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0195828_13	UniRef90	UniRef90_T3DSR7	Minor capsid family protein	NA
UHGV-0195828_13	eggNOG-mapper	1151292.QEW_4532	Minor capsid protein	NA
UHGV-0195828_13	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0195828_13	Structural annotation	PF11114	NA	NA
UHGV-0195828_14	PHROG	phrog_3366	NA	unknown function
UHGV-0195828_14	eggNOG-mapper	411473.RUMCAL_01932	NA	NA
UHGV-0195828_14	Structural annotation	PF20536, TIGR01563, COG5614	NA	NA
UHGV-0195828_15	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0195828_15	eggNOG-mapper	641112.ACOK01000073_gene2896	NA	NA
UHGV-0195828_16	PHROG	phrog_267	major head protein	head and packaging
UHGV-0195828_16	UniRef90	UniRef90_A0A4P8IA69	Phage capsid and scaffold	NA
UHGV-0195828_16	eggNOG-mapper	411473.RUMCAL_01930	NA	NA
UHGV-0195828_16	Structural annotation	PF11651, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0195828_17	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0195828_17	UniRef90	UniRef90_R7FEY9	Phage minor structural protein GP20	NA
UHGV-0195828_17	eggNOG-mapper	411473.RUMCAL_01929	Phage minor structural protein GP20	NA
UHGV-0195828_17	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0195828_17	Structural annotation	PF06810, MF_02110	NA	NA
UHGV-0195828_19	Structural annotation	PF12305	NA	NA
UHGV-0195828_20	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0195828_20	UniRef90	UniRef90_U2K8C2	Phage minor capsid protein 2	NA
UHGV-0195828_20	eggNOG-mapper	411473.RUMCAL_01925	NA	NA
UHGV-0195828_20	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0195828_20	COG	COG2369	NA	NA
UHGV-0195828_20	Structural annotation	PF06152	NA	NA
UHGV-0195828_21	PHROG	phrog_533	portal protein	head and packaging
UHGV-0195828_21	UniRef90	UniRef90_U2KRP5	Putative phage minor capsid protein	NA
UHGV-0195828_21	eggNOG-mapper	411473.RUMCAL_01924	NA	NA
UHGV-0195828_21	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0195828_22	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0195828_22	PHROG	phrog_10250	NA	unknown function
UHGV-0195828_22	UniRef90	UniRef90_U2LZ34	Phage terminase, large subunit, PBSX family	NA
UHGV-0195828_22	eggNOG-mapper	411473.RUMCAL_01923	Phage terminase, large subunit, PBSX family	NA
UHGV-0195828_22	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0195828_22	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0195828_22	COG	COG1783	Phage terminase large subunit	NA
UHGV-0195828_22	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0195828_23	UniRef90	UniRef90_W0U9H3	Phage terminase, small subunit	NA
UHGV-0195828_23	eggNOG-mapper	411473.RUMCAL_01921	NA	NA
UHGV-0195828_24	KOfam	K02601	nusG; transcription termination/antitermination protein NusG	NA
UHGV-0195828_24	PHROG	phrog_6386	transcription antiterminator	transcription regulation
UHGV-0195828_24	UniRef90	UniRef90_U2K8B7	Transcription termination/antitermination factor NusG	NA
UHGV-0195828_24	eggNOG-mapper	411473.RUMCAL_01920	Transcription termination factor nusG	NA
UHGV-0195828_24	Pfam	PF02357	Transcription termination factor nusG	NusG
UHGV-0195828_24	COG	COG0250	Transcription termination/antitermination protein NusG	NA
UHGV-0195828_24	Structural annotation	PF02357, MF_00951, NF033641, COG0250	NA	NA
UHGV-0195828_25	PHROG	phrog_426	terminase small subunit	head and packaging
UHGV-0195828_25	UniRef90	UniRef90_UPI001D05DC57	NA	NA
UHGV-0195828_25	eggNOG-mapper	411473.RUMCAL_01919	NA	NA
UHGV-0195828_25	Pfam	PF11985	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
UHGV-0195828_25	Structural annotation	PF11985	NA	NA
UHGV-0195828_26	PHROG	phrog_25462	NA	unknown function
UHGV-0195828_26	UniRef90	UniRef90_A0A3C0QMV8	Type VI secretion protein	NA
UHGV-0195828_26	eggNOG-mapper	411473.RUMCAL_01918	NA	NA
UHGV-0195828_26	Structural annotation	PF01638, MF_01819, NF002926, COG1733	NA	NA
UHGV-0195828_27	PHROG	phrog_462	lipoprotein	other
UHGV-0195828_27	eggNOG-mapper	411473.RUMCAL_01917	NA	NA
UHGV-0195828_28	PHROG	phrog_532	late transcriptional activator	transcription regulation
UHGV-0195828_28	UniRef90	UniRef90_U2KR36	Mor transcription activator family protein	NA
UHGV-0195828_28	eggNOG-mapper	411473.RUMCAL_01916	Mor transcription activator	NA
UHGV-0195828_28	Pfam	PF08765	Mor transcription activator family	Mor
UHGV-0195828_28	COG	COG5566	Transcriptional regulator, middle operon regulator (Mor) family	NA
UHGV-0195828_28	Structural annotation	PF08765, NF040785, COG5566	NA	NA
UHGV-0195828_29	PHROG	phrog_286	NA	unknown function
UHGV-0195828_29	UniRef90	UniRef90_A0A373KYV3	NA	NA
UHGV-0195828_29	eggNOG-mapper	411473.RUMCAL_01915	NA	NA
UHGV-0195828_29	Pfam	PF06252	Bacteriophage Mu, GemA protein	GemA
UHGV-0195828_29	Structural annotation	PF06252	NA	NA
UHGV-0195828_30	KOfam	K02315	dnaC; DNA replication protein DnaC	NA
UHGV-0195828_30	PHROG	phrog_50	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0195828_30	UniRef90	UniRef90_U2KRN6	IstB_IS21 domain-containing protein	NA
UHGV-0195828_30	eggNOG-mapper	411473.RUMCAL_01914	NA	NA
UHGV-0195828_30	Pfam	PF01695	IstB-like ATP binding protein	IstB_IS21
UHGV-0195828_30	COG	COG1484	DNA replication protein DnaC	NA
UHGV-0195828_30	Structural annotation	PF01695, MF_01158, NF005378, COG1484	NA	NA
UHGV-0195828_31	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0195828_31	UniRef90	UniRef90_UPI000FF705BB	phage replication protein	NA
UHGV-0195828_31	eggNOG-mapper	411473.RUMCAL_01913	HNH endonuclease	NA
UHGV-0195828_31	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0195828_32	PHROG	phrog_5671	NA	unknown function
UHGV-0195828_32	eggNOG-mapper	411473.RUMCAL_01912	NA	NA
UHGV-0195828_33	PHROG	phrog_6244	NA	unknown function
UHGV-0195828_33	eggNOG-mapper	1232453.BAIF02000002_gene1275	YqaJ viral recombinase family	NA
UHGV-0195828_33	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0195828_34	PHROG	phrog_4292	NA	unknown function
UHGV-0195828_34	UniRef90	UniRef90_A0A7G3VS96	Putative NHN endonuclease	NA
UHGV-0195828_34	eggNOG-mapper	411473.RUMCAL_01910	NA	NA
UHGV-0195828_35	KOfam	K07132	MuB; ATP-dependent target DNA activator	NA
UHGV-0195828_35	PHROG	phrog_296	DNA transposition protein	integration and excision
UHGV-0195828_35	UniRef90	UniRef90_R7FFF2	AAA domain protein	NA
UHGV-0195828_35	eggNOG-mapper	411473.RUMCAL_01909	AAA domain	NA
UHGV-0195828_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195828_35	Pfam	PF13401	AAA domain	AAA_22
UHGV-0195828_35	COG	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase	NA
UHGV-0195828_35	Structural annotation	PF13401, MF_01407, TIGR03015, COG2842	NA	NA
UHGV-0195828_36	PHROG	phrog_310	transposase	integration and excision
UHGV-0195828_36	UniRef90	UniRef90_U2LZ18	Integrase catalytic domain-containing protein	NA
UHGV-0195828_36	eggNOG-mapper	411473.RUMCAL_01908	Mu transposase, C-terminal	NA
UHGV-0195828_36	PADLOC	TnsB_0_V-K	TnsB_0_V-K	CRISPR-CAS
UHGV-0195828_36	Pfam	PF09039	Mu DNA binding, I gamma subdomain	HTH_Tnp_Mu_2
UHGV-0195828_36	Pfam	PF00665	Integrase core domain	rve
UHGV-0195828_36	Pfam	PF09299	Mu transposase, C-terminal	Mu-transpos_C
UHGV-0195828_36	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-0195828_36	Structural annotation	PF02914, PF09039, PF09299, PF21531, NF033594, TIGR01764, COG3316, COG3311	NA	NA
UHGV-0195828_40	KOfam	K23779	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	NA
UHGV-0195828_40	PHROG	phrog_5823	transcriptional regulator	transcription regulation
UHGV-0195828_40	UniRef90	UniRef90_U2K8A4	DNA-binding helix-turn-helix protein	NA
UHGV-0195828_40	eggNOG-mapper	596154.Alide2_1081	Helix-turn-helix domain	NA
UHGV-0195828_40	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0195828_40	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0195828_40	COG	COG3620	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	NA
UHGV-0195828_45	UniRef90	UniRef90_R7FFE5	HTH cro/C1-type domain-containing protein	NA
UHGV-0195828_45	eggNOG-mapper	1160721.RBI_II00559	Peptidase S24-like	NA
UHGV-0195828_45	Pfam	PF07022	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
UHGV-0195828_45	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0195828_45	Structural annotation	PF12844, MF_00535, NF007257, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195828	Yes	29,672 bps	52.28%	100.00%	0.9732
UHGV-0105135	No	32,079 bps	51.88%	89.40%	0.9747
UHGV-1344369	No	30,619 bps	51.68%	87.23%	0.9739
UHGV-1340306	No	18,161 bps	52.92%	49.89%	0.9700
UHGV-0101223	No	14,772 bps	52.92%	40.65%	0.9746