vOTU-047332

Overview

vOTU representative UHGV-0195917

No. of genomes 3

Genome length 31,808 bps

Completeness 100.00% (complete)

Host RGIG4076 sp905198155

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047332
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-02308 › vGENUS-02745 › vSUBGEN-32286 › vOTU-047332
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Acutalibacteraceae › RGIG4076 › RGIG4076 sp905198155
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0195917
BioSample	NA
Genome length	31,808 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	48
CDS density	90.82%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0195917_1	PHROG	phrog_10613	tail length tape measure protein	tail
UHGV-0195917_1	UniRef90	UniRef90_UPI001C12009F	peptidoglycan DD-metalloendopeptidase family protein	NA
UHGV-0195917_1	eggNOG-mapper	1160721.RBI_II00528	Phage tail tape measure protein, TP901 family	NA
UHGV-0195917_1	COG	COG1006	Multisubunit Na+/H+ antiporter, MnhC subunit	NA
UHGV-0195917_1	Structural annotation	PF20155	NA	NA
UHGV-0195917_2	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0195917_2	UniRef90	UniRef90_UPI0001668E5D	phage tail family protein	NA
UHGV-0195917_2	eggNOG-mapper	1123263.AUKY01000068_gene490	tail component	NA
UHGV-0195917_2	COG	COG4722	Phage-related protein YomH	NA
UHGV-0195917_2	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0195917_3	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0195917_3	UniRef90	UniRef90_A0A316NPB5	Peptidase S74 domain-containing protein	NA
UHGV-0195917_3	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0195917_3	Pfam	PF18994	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
UHGV-0195917_3	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0195917_3	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0195917_3	COG	COG4926	Phage-related protein	NA
UHGV-0195917_4	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0195917_4	PHROG	phrog_7767	metallo-endopeptidase	other
UHGV-0195917_4	UniRef90	UniRef90_A0A845A1P0	Peptidoglycan DD-metalloendopeptidase family protein	NA
UHGV-0195917_4	eggNOG-mapper	517722.AEUE01000001_gene2537	COG0739 Membrane proteins related to metalloendopeptidases	NA
UHGV-0195917_4	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0195917_4	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0195917_5	PHROG	phrog_199	holin	lysis
UHGV-0195917_5	UniRef90	UniRef90_A0A7G5NVU4	Phage holin family protein	NA
UHGV-0195917_5	eggNOG-mapper	1160721.RBI_I01565	Bacteriophage holin family	NA
UHGV-0195917_5	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0195917_5	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0195917_5	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0195917_5	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0195917_7	Pfam	PF00583	Acetyltransferase (GNAT) family	Acetyltransf_1
UHGV-0195917_7	COG	COG0454	N-acetyltransferase, GNAT superfamily (includes histone acetyltransferase HPA2)	NA
UHGV-0195917_7	Structural annotation	PF12568, MF_02210, TIGR01575, COG2388	NA	NA
UHGV-0195917_8	UniRef90	UniRef90_UPI00164AED9E	helix-turn-helix domain-containing protein	NA
UHGV-0195917_8	Structural annotation	NF040522, COG2944	NA	NA
UHGV-0195917_11	KOfam	K14059	int; integrase	NA
UHGV-0195917_11	PHROG	phrog_1	integrase	integration and excision
UHGV-0195917_11	UniRef90	UniRef90_A0A7X7EIT8	Tyrosine-type recombinase/integrase	NA
UHGV-0195917_11	eggNOG-mapper	1408437.JNJN01000039_gene380	Phage integrase, N-terminal SAM-like domain	NA
UHGV-0195917_11	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0195917_11	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0195917_11	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0195917_11	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0195917_12	PHROG	phrog_1914	NA	unknown function
UHGV-0195917_12	UniRef90	UniRef90_R6DVV5	Predicted Zn peptidase	NA
UHGV-0195917_12	eggNOG-mapper	1160721.RBI_I01604	NA	NA
UHGV-0195917_12	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0195917_12	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0195917_12	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0195917_13	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0195917_13	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195917_13	UniRef90	UniRef90_A0A372UYM9	LexA family transcriptional regulator	NA
UHGV-0195917_13	eggNOG-mapper	411471.SUBVAR_07015	NA	NA
UHGV-0195917_13	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0195917_13	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195917_13	Pfam	PF04967	HTH DNA binding domain	HTH_10
UHGV-0195917_13	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0195917_13	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195917_14	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0195917_14	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195917_14	UniRef90	UniRef90_A0A5D8QC57	Helix-turn-helix domain-containing protein	NA
UHGV-0195917_14	eggNOG-mapper	1235790.C805_00592	Helix-turn-helix XRE-family like proteins	NA
UHGV-0195917_14	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0195917_14	Pfam	PF15731	Antitoxin component of bacterial toxin-antitoxin system, MqsA	MqsA_antitoxin
UHGV-0195917_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195917_14	NCBIFam	NF041951.1	RstR family transcriptional repressor	NA
UHGV-0195917_14	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0195917_15	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0195917_15	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0195917_15	UniRef90	UniRef90_A0A416W0Y0	XRE family transcriptional regulator	NA
UHGV-0195917_15	eggNOG-mapper	1232446.BAIE02000078_gene652	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0195917_15	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195917_15	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195917_15	Structural annotation	PF13560, MF_00535, NF041951, COG1396	NA	NA
UHGV-0195917_16	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0195917_16	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195917_16	UniRef90	UniRef90_A0A6N2UL50	Helix-turn-helix	NA
UHGV-0195917_16	eggNOG-mapper	1504823.CCMM01000008_gene1079	sequence-specific DNA binding	NA
UHGV-0195917_16	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195917_16	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0195917_16	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0195917_17	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0195917_17	UniRef90	UniRef90_A0A355JG00	XRE family transcriptional regulator	NA
UHGV-0195917_17	eggNOG-mapper	1123511.KB905866_gene3782	sequence-specific DNA binding	NA
UHGV-0195917_17	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195917_17	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195917_17	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0195917_18	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0195917_18	UniRef90	UniRef90_A0A498CMF4	XRE family transcriptional regulator	NA
UHGV-0195917_18	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0195917_18	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0195917_18	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0195917_22	Structural annotation	PF09228	NA	NA
UHGV-0195917_28	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0195917_29	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0195917_29	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0195917_29	UniRef90	UniRef90_A0A8J6IQ72	Single-stranded DNA-binding protein	NA
UHGV-0195917_29	eggNOG-mapper	537013.CLOSTMETH_00062	Single-stranded DNA-binding protein	NA
UHGV-0195917_29	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0195917_29	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0195917_29	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0195917_29	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0195917_29	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0195917_30	PHROG	phrog_1408	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0195917_30	eggNOG-mapper	1095750.HMPREF9970_1674	NA	NA
UHGV-0195917_30	Structural annotation	PF01978, NF000243, COG0735	NA	NA
UHGV-0195917_31	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0195917_31	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0195917_31	UniRef90	UniRef90_UPI001915D0A5	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0195917_31	eggNOG-mapper	545697.HMPREF0216_02819	Endodeoxyribonuclease RusA	NA
UHGV-0195917_31	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0195917_31	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0195917_31	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0195917_33	PHROG	phrog_111	DNA methyltransferase	other
UHGV-0195917_33	UniRef90	UniRef90_A0A1Q6T6T6	Adenine methyltransferase	NA
UHGV-0195917_33	eggNOG-mapper	445972.ANACOL_03344	DNA N-6-adenine-methyltransferase (Dam)	NA
UHGV-0195917_33	PADLOC	oMTase_00015	orphan methyltransferase	RM
UHGV-0195917_33	Pfam	PF05869	DNA N-6-adenine-methyltransferase (Dam)	Dam
UHGV-0195917_33	Structural annotation	PF05869, TIGR01712	NA	NA
UHGV-0195917_36	KOfam	K07451	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	NA
UHGV-0195917_36	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0195917_36	UniRef90	UniRef90_A0A0D8IV26	HNH endonuclease	NA
UHGV-0195917_36	eggNOG-mapper	1226322.HMPREF1545_00111	HNH nucleases	NA
UHGV-0195917_36	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0195917_36	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0195917_36	Structural annotation	PF05766, NF008448	NA	NA
UHGV-0195917_37	PHROG	phrog_361	terminase small subunit	head and packaging
UHGV-0195917_37	UniRef90	UniRef90_R5V087	Phage terminase small subunit P27 family	NA
UHGV-0195917_37	eggNOG-mapper	596315.HMPREF0634_0388	Phage terminase, small subunit	NA
UHGV-0195917_37	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0195917_37	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0195917_38	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0195917_38	UniRef90	UniRef90_R5VJG5	Phage terminase large subunit	NA
UHGV-0195917_38	eggNOG-mapper	491915.Aflv_0661	Phage Terminase	NA
UHGV-0195917_38	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0195917_38	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0195917_38	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0195917_38	Structural annotation	PF20441, PF03354, MF_04013, TIGR01547, COG4626	NA	NA
UHGV-0195917_39	PHROG	phrog_12	portal protein	head and packaging
UHGV-0195917_39	UniRef90	UniRef90_A0A1C6H763	Phage portal protein, HK97 family	NA
UHGV-0195917_39	eggNOG-mapper	1226322.HMPREF1545_00114	Phage portal protein, HK97 family	NA
UHGV-0195917_39	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0195917_39	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0195917_39	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0195917_39	Structural annotation	PF04860, MF_04120, TIGR01537, COG4695	NA	NA
UHGV-0195917_40	KOfam	K06904	NA	NA
UHGV-0195917_40	PHROG	phrog_80	head maturation protease	head and packaging
UHGV-0195917_40	UniRef90	UniRef90_UPI00189B2313	HK97 family phage prohead protease	NA
UHGV-0195917_40	eggNOG-mapper	1226322.HMPREF1545_00115	Phage prohead protease, HK97 family	NA
UHGV-0195917_40	Pfam	PF04586	Caudovirus prohead serine protease	Peptidase_S78
UHGV-0195917_40	NCBIFam	TIGR01543.1	HK97 family phage prohead protease	NA
UHGV-0195917_40	COG	COG3740	Phage head maturation protease	NA
UHGV-0195917_40	Structural annotation	PF04586, TIGR01543, COG3740	NA	NA
UHGV-0195917_41	PHROG	phrog_10	major head protein	head and packaging
UHGV-0195917_41	UniRef90	UniRef90_UPI000679B959	phage major capsid protein	NA
UHGV-0195917_41	eggNOG-mapper	1226322.HMPREF1545_00116	phage major capsid protein, HK97 family	NA
UHGV-0195917_41	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0195917_41	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0195917_41	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0195917_41	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0195917_41	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0195917_42	PHROG	phrog_2550	NA	unknown function
UHGV-0195917_42	UniRef90	UniRef90_UPI0008717716	phage head-tail connector protein	NA
UHGV-0195917_42	eggNOG-mapper	1226322.HMPREF1545_00117	NA	NA
UHGV-0195917_42	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0195917_43	PHROG	phrog_19734	NA	unknown function
UHGV-0195917_43	UniRef90	UniRef90_A0A3R6AW46	Head-tail adaptor protein	NA
UHGV-0195917_43	eggNOG-mapper	1235798.C817_04587	NA	NA
UHGV-0195917_43	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0195917_44	eggNOG-mapper	1232446.BAIE02000002_gene829	NA	NA
UHGV-0195917_45	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0195917_45	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-0195917_45	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-0195917_45	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0195917_45	Structural annotation	TIGR01725	NA	NA
UHGV-0195917_46	PHROG	phrog_88	major tail protein	tail
UHGV-0195917_46	UniRef90	UniRef90_UPI0018771F27	phage tail protein	NA
UHGV-0195917_46	eggNOG-mapper	1235792.C808_03059	phage major tail protein, phi13 family	NA
UHGV-0195917_46	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0195917_46	COG	COG5492	NA	NA
UHGV-0195917_46	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0195917	Yes	31,808 bps	52.87%	100.00%	0.9760
UHGV-0315658	No	32,505 bps	52.87%	99.90%	0.9698
UHGV-0132519	No	31,423 bps	52.85%	99.03%	0.9763