vOTU-047350

Overview

vOTU representative UHGV-0196597

No. of genomes 2

Genome length 30,741 bps

Completeness 100.00% (complete)

Host HGM13233 sp900762805

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047350
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-07361 › vGENUS-20275 › vSUBGEN-39813 › vOTU-047350
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › HGM13233 › HGM13233 sp900762805
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0196597
BioSample	SAMN09781741
Genome length	30,741 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	94.16%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0196597_1	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-0196597_1	PHROG	phrog_4433	NA	unknown function
UHGV-0196597_1	eggNOG-mapper	33035.JPJF01000122_gene2458	regulation of DNA-templated transcription, elongation	NA
UHGV-0196597_1	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0196597_1	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0196597_1	Structural annotation	NF000066	NA	NA
UHGV-0196597_4	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0196597_4	PHROG	phrog_186	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0196597_4	eggNOG-mapper	485913.Krac_12129	TIGRFAM primosome, DnaD subunit	NA
UHGV-0196597_4	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0196597_4	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0196597_4	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0196597_5	PHROG	phrog_6969	NA	unknown function
UHGV-0196597_5	UniRef90	UniRef90_UPI00195AB05B	helix-turn-helix domain-containing protein	NA
UHGV-0196597_5	eggNOG-mapper	1232446.BAIE02000002_gene816	NA	NA
UHGV-0196597_6	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0196597_6	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0196597_6	UniRef90	UniRef90_R6E141	Single-stranded DNA-binding protein	NA
UHGV-0196597_6	eggNOG-mapper	748224.HMPREF9436_03359	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0196597_6	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0196597_6	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0196597_6	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0196597_6	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0196597_6	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0196597_7	PHROG	phrog_7566	NA	unknown function
UHGV-0196597_7	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-0196597_8	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0196597_8	UniRef90	UniRef90_UPI001F3F3E5C	recombination protein NinB	NA
UHGV-0196597_8	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0196597_8	Structural annotation	PF05772	NA	NA
UHGV-0196597_9	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0196597_9	UniRef90	UniRef90_A0A843HP81	ERF family protein	NA
UHGV-0196597_9	eggNOG-mapper	1329250.WOSG25_420010	ERF superfamily	NA
UHGV-0196597_9	Pfam	PF04404	ERF superfamily	ERF
UHGV-0196597_9	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0196597_15	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0196597_15	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0196597_16	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0196597_16	UniRef90	UniRef90_A0A4Z0XXV8	HTH-type transcriptional regulator Xre	NA
UHGV-0196597_16	eggNOG-mapper	1378168.N510_01712	NA	NA
UHGV-0196597_17	eggNOG-mapper	1462527.CCDM010000001_gene1872	NA	NA
UHGV-0196597_18	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0196597_18	PHROG	phrog_95	integrase	integration and excision
UHGV-0196597_18	UniRef90	UniRef90_UPI000B3A7453	recombinase family protein	NA
UHGV-0196597_18	eggNOG-mapper	1235835.C814_03413	Resolvase, N terminal domain	NA
UHGV-0196597_18	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0196597_18	Pfam	PF07508	Recombinase	Recombinase
UHGV-0196597_18	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0196597_18	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0196597_18	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0196597_19	KOfam	K07729	K07729; putative transcriptional regulator	NA
UHGV-0196597_19	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0196597_19	UniRef90	UniRef90_UPI0018DBA295	helix-turn-helix domain-containing protein	NA
UHGV-0196597_19	eggNOG-mapper	443254.Marpi_0298	Bacteriophage CI repressor helix-turn-helix domain	NA
UHGV-0196597_19	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0196597_19	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0196597_19	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0196597_21	KOfam	K19304	mepM; murein DD-endopeptidase [EC:3.4.24.-]	NA
UHGV-0196597_21	PHROG	phrog_6700	endolysin	lysis
UHGV-0196597_21	UniRef90	UniRef90_A0A847VZM8	M23 family metallopeptidase	NA
UHGV-0196597_21	eggNOG-mapper	1150399.AQYK01000002_gene2810	Peptidase family M23	NA
UHGV-0196597_21	Pfam	PF01551	Peptidase family M23	Peptidase_M23
UHGV-0196597_21	COG	COG0739	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	NA
UHGV-0196597_22	eggNOG-mapper	1304866.K413DRAFT_4747	NA	NA
UHGV-0196597_23	PHROG	phrog_1863	NA	unknown function
UHGV-0196597_23	eggNOG-mapper	693746.OBV_18260	NA	NA
UHGV-0196597_25	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0196597_26	PHROG	phrog_5417	NA	unknown function
UHGV-0196597_26	eggNOG-mapper	1094508.Tsac_2414	NA	NA
UHGV-0196597_26	Pfam	PF12571	Phage tail-collar fibre protein	DUF3751
UHGV-0196597_26	Structural annotation	PF12571	NA	NA
UHGV-0196597_27	eggNOG-mapper	509191.AEDB02000075_gene2803	NA	NA
UHGV-0196597_27	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0196597_28	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0196597_28	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-0196597_28	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0196597_28	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0196597_28	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0196597_28	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0196597_29	PHROG	phrog_706	NA	unknown function
UHGV-0196597_29	UniRef90	UniRef90_UPI000E52BFC1	Gp15 family bacteriophage protein	NA
UHGV-0196597_29	eggNOG-mapper	665959.HMPREF1013_00192	Bacteriophage Gp15 protein	NA
UHGV-0196597_29	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0196597_29	Structural annotation	PF06854	NA	NA
UHGV-0196597_30	Structural annotation	PF10666	NA	NA
UHGV-0196597_31	PHROG	phrog_820	major tail protein	tail
UHGV-0196597_31	UniRef90	UniRef90_A0A3A6EPU8	S-l_SbsC_C domain-containing protein	NA
UHGV-0196597_31	eggNOG-mapper	428125.CLOLEP_00178	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0196597_31	COG	COG5492	NA	NA
UHGV-0196597_31	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0196597_32	Structural annotation	PF12691	NA	NA
UHGV-0196597_33	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0196597_33	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0196597_33	Structural annotation	PF11114	NA	NA
UHGV-0196597_34	UniRef90	UniRef90_UPI001D06E7F2	minor capsid protein	NA
UHGV-0196597_34	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0196597_35	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0196597_35	eggNOG-mapper	1231057.AMGD01000018_gene3617	NA	NA
UHGV-0196597_36	PHROG	phrog_422	major head protein	head and packaging
UHGV-0196597_36	UniRef90	UniRef90_A0A316T938	S-l_SbsC_C domain-containing protein	NA
UHGV-0196597_36	eggNOG-mapper	428125.CLOLEP_00183	COG NOG28280 non supervised orthologous group	NA
UHGV-0196597_36	Structural annotation	PF19821, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0196597_40	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0196597_40	UniRef90	UniRef90_A7VTB0	Phage minor capsid protein 2	NA
UHGV-0196597_40	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0196597_40	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0196597_40	COG	COG2369	NA	NA
UHGV-0196597_40	Structural annotation	PF06152	NA	NA
UHGV-0196597_41	PHROG	phrog_533	portal protein	head and packaging
UHGV-0196597_41	UniRef90	UniRef90_UPI001898C571	phage portal protein	NA
UHGV-0196597_41	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0196597_41	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0196597_41	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0196597_41	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0196597_42	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0196597_42	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0196597_42	UniRef90	UniRef90_A0A847YTD2	PBSX family phage terminase large subunit	NA
UHGV-0196597_42	eggNOG-mapper	1449050.JNLE01000003_gene3895	phage terminase, large subunit, PBSX family	NA
UHGV-0196597_42	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0196597_42	Pfam	PF17289	Terminase RNaseH-like domain	Terminase_6C
UHGV-0196597_42	COG	COG1783	Phage terminase large subunit	NA
UHGV-0196597_42	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0196597_44	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0196597_44	PHROG	phrog_21498	NA	unknown function
UHGV-0196597_44	UniRef90	UniRef90_A0A7X2P836	ParB domain-containing protein	NA
UHGV-0196597_44	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0196597_44	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0196597_44	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0196597_44	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0196597_44	Structural annotation	PF02195, PF05869, MF_02015, TIGR00180, TIGR01712, COG1475	NA	NA
UHGV-0196597_45	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0196597_45	eggNOG-mapper	580331.Thit_1400	NA	NA
UHGV-0196597_45	Structural annotation	PF07374, TIGR01636	NA	NA
UHGV-0196597_47	PHROG	phrog_757	DNA methyltransferase	other
UHGV-0196597_47	UniRef90	UniRef90_UPI00189BA758	DNA cytosine methyltransferase	NA
UHGV-0196597_47	eggNOG-mapper	397290.C810_01487	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0196597_47	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0196597_47	Structural annotation	PF00145, MF_01872, TIGR00675, COG0270	NA	NA
UHGV-0196597_49	PHROG	phrog_3136	NA	unknown function
UHGV-0196597_49	UniRef90	UniRef90_A0A6N7TMC2	ASCH domain-containing protein	NA
UHGV-0196597_49	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0196597_49	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0196597_50	eggNOG-mapper	1203606.HMPREF1526_00222	NA	NA
UHGV-0196597_51	Pfam	PF04448	NA	DUF551
UHGV-0196597_51	Structural annotation	PF04448, NF041588	NA	NA
UHGV-0196597_52	PHROG	phrog_27197	NA	unknown function
UHGV-0196597_52	COG	COG5164	Transcription elongation factor SPT5	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0196597	Yes	30,741 bps	56.06%	100.00%	0.9736
UHGV-0171399	No	30,514 bps	55.96%	99.57%	0.9707