vOTU-047359

Overview

vOTU representative UHGV-0196857

No. of genomes 3

Genome length 39,157 bps

Completeness 100.00% (complete)

Host Clostridium P perfringens

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047359
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-01049 › vGENUS-20276 › vSUBGEN-39814 › vOTU-047359
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium P › Clostridium P perfringens
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0196857
BioSample	SAMN00998686
Genome length	39,157 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	55
CDS density	91.43%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0196857_1	eggNOG-mapper	189425.PGRAT_24120	NA	NA
UHGV-0196857_3	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0196857_3	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0196857_3	UniRef90	UniRef90_UPI001C8561B2	phage antirepressor KilAC domain-containing protein	NA
UHGV-0196857_3	eggNOG-mapper	1415775.U729_2580	BRO family, N-terminal domain	NA
UHGV-0196857_3	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0196857_3	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0196857_3	COG	COG3617	Prophage antirepressor	NA
UHGV-0196857_3	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA
UHGV-0196857_4	UniRef90	UniRef90_UPI0019D114BC	XRE family transcriptional regulator	NA
UHGV-0196857_4	eggNOG-mapper	1430331.EP10_02425	NA	NA
UHGV-0196857_4	Structural annotation	PF05339, NF041951, COG1476	NA	NA
UHGV-0196857_5	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0196857_5	UniRef90	UniRef90_UPI0018E40974	helix-turn-helix transcriptional regulator	NA
UHGV-0196857_5	eggNOG-mapper	1415775.U729_2578	Helix-turn-helix XRE-family like proteins	NA
UHGV-0196857_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0196857_5	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0196857_5	Structural annotation	PF12844, MF_00535, NF007257, COG1396	NA	NA
UHGV-0196857_6	PHROG	phrog_87	metallo-protease	other
UHGV-0196857_6	UniRef90	UniRef90_A0A6M1WL67	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0196857_6	eggNOG-mapper	929506.CbC4_1185	Zn peptidase	NA
UHGV-0196857_6	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0196857_6	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0196857_6	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0196857_7	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0196857_7	PHROG	phrog_95	integrase	integration and excision
UHGV-0196857_7	UniRef90	UniRef90_A0A6M1WJL9	Recombinase family protein	NA
UHGV-0196857_7	eggNOG-mapper	195103.CPF_1608	Resolvase, N terminal domain	NA
UHGV-0196857_7	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0196857_7	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0196857_7	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0196857_8	KOfam	K03976	ybaK, ebsC; Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase [EC:3.1.1.-]	NA
UHGV-0196857_8	PHROG	phrog_17858	NA	unknown function
UHGV-0196857_8	UniRef90	UniRef90_A0A0H2YS73	YbaK/prolyl-tRNA synthetases associated domain protein	NA
UHGV-0196857_8	eggNOG-mapper	195103.CPF_1609	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily	NA
UHGV-0196857_8	Pfam	PF04073	Aminoacyl-tRNA editing domain	tRNA_edit
UHGV-0196857_8	COG	COG2606	Cys-tRNA(Pro) deacylase, prolyl-tRNA editing enzyme YbaK/EbsC	NA
UHGV-0196857_10	PHROG	phrog_16607	NA	unknown function
UHGV-0196857_10	eggNOG-mapper	1280692.AUJL01000025_gene2060	NA	NA
UHGV-0196857_11	KOfam	K07273	acm; lysozyme	NA
UHGV-0196857_11	PHROG	phrog_6219	endolysin	lysis
UHGV-0196857_11	UniRef90	UniRef90_Q0SPG7	Lysozyme	NA
UHGV-0196857_11	eggNOG-mapper	195103.CPF_0973	family 25	NA
UHGV-0196857_11	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0196857_11	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0196857_11	Pfam	PF06347	Bacterial SH3 domain	SH3_4
UHGV-0196857_11	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0196857_11	Structural annotation	PF01183, PF01476, TIGR02899, NF007360, COG3757, COG1388	NA	NA
UHGV-0196857_12	PHROG	phrog_9492	NA	unknown function
UHGV-0196857_12	UniRef90	UniRef90_A0A0H2YNK8	Conserved domain protein	NA
UHGV-0196857_12	eggNOG-mapper	195103.CPF_0972	NA	NA
UHGV-0196857_13	PHROG	phrog_199	holin	lysis
UHGV-0196857_13	UniRef90	UniRef90_M9Q253	Putative holin	NA
UHGV-0196857_13	eggNOG-mapper	1305708.M9Q253_9CAUD	Pfam:Phage_holin_4_1	NA
UHGV-0196857_13	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0196857_13	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0196857_13	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0196857_14	PHROG	phrog_6130	NA	unknown function
UHGV-0196857_14	eggNOG-mapper	272562.CA_C0064	NA	NA
UHGV-0196857_15	PHROG	phrog_16267	NA	unknown function
UHGV-0196857_15	UniRef90	UniRef90_B1RB98	KID repeat family protein	NA
UHGV-0196857_15	eggNOG-mapper	1305708.M9Q2I5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0196857_15	Pfam	PF02018	Carbohydrate binding domain	CBM_4_9
UHGV-0196857_15	Structural annotation	PF05113, PF04300, PF03944, NF033848, NF033675, COG3500	NA	NA
UHGV-0196857_16	PHROG	phrog_1401	NA	unknown function
UHGV-0196857_16	UniRef90	UniRef90_UPI00077668B1	NA	NA
UHGV-0196857_16	eggNOG-mapper	195103.CPF_0968	NA	NA
UHGV-0196857_16	Structural annotation	PF07761	NA	NA
UHGV-0196857_17	PHROG	phrog_15246	NA	unknown function
UHGV-0196857_17	eggNOG-mapper	195103.CPF_0967	NA	NA
UHGV-0196857_18	PHROG	phrog_1194	NA	unknown function
UHGV-0196857_18	UniRef90	UniRef90_A0A0L8EWZ8	NA	NA
UHGV-0196857_18	eggNOG-mapper	195103.CPF_0966	NA	NA
UHGV-0196857_18	Pfam	PF20458	NA	DUF6711
UHGV-0196857_18	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0196857_19	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0196857_19	UniRef90	UniRef90_A0A0H2YR97	Putative membrane protein	NA
UHGV-0196857_19	eggNOG-mapper	195103.CPF_0965	phage tail tape measure protein	NA
UHGV-0196857_19	COG	COG1511	NA	NA
UHGV-0196857_20	PHROG	phrog_8355	NA	unknown function
UHGV-0196857_20	UniRef90	UniRef90_M9Q2I4	Putative phage protein	NA
UHGV-0196857_20	eggNOG-mapper	1415775.U729_2613	NA	NA
UHGV-0196857_20	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0196857_20	Structural annotation	PF06854	NA	NA
UHGV-0196857_21	PHROG	phrog_8300	NA	unknown function
UHGV-0196857_21	eggNOG-mapper	195103.CPF_0963	NA	NA
UHGV-0196857_21	Structural annotation	PF06896	NA	NA
UHGV-0196857_22	PHROG	phrog_820	major tail protein	tail
UHGV-0196857_22	eggNOG-mapper	195103.CPF_0962	NA	NA
UHGV-0196857_22	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0196857_23	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0196857_23	UniRef90	UniRef90_UPI001C8D62C5	minor capsid protein	NA
UHGV-0196857_23	eggNOG-mapper	195103.CPF_0961	NA	NA
UHGV-0196857_23	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0196857_23	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0196857_24	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0196857_24	UniRef90	UniRef90_UPI001C8D6722	minor capsid protein	NA
UHGV-0196857_24	eggNOG-mapper	1305708.M9Q249_9CAUD	Minor capsid protein	NA
UHGV-0196857_25	PHROG	phrog_8710	NA	unknown function
UHGV-0196857_25	eggNOG-mapper	195103.CPF_0959	NA	NA
UHGV-0196857_25	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0196857_26	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0196857_26	eggNOG-mapper	1305708.M9Q2K9_9CAUD	NA	NA
UHGV-0196857_27	PHROG	phrog_1378	NA	unknown function
UHGV-0196857_27	UniRef90	UniRef90_A0A0B3VH35	HALZ domain-containing protein	NA
UHGV-0196857_27	eggNOG-mapper	195103.CPF_0957	NA	NA
UHGV-0196857_28	PHROG	phrog_422	major head protein	head and packaging
UHGV-0196857_28	UniRef90	UniRef90_A0A0A7FYK2	Putative phage major capsid protein	NA
UHGV-0196857_28	eggNOG-mapper	1305708.M9Q2F4_9CAUD	NA	NA
UHGV-0196857_28	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0196857_29	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0196857_29	UniRef90	UniRef90_A0A0N7BTJ7	NA	NA
UHGV-0196857_29	eggNOG-mapper	1305708.M9Q248_9CAUD	NA	NA
UHGV-0196857_29	Structural annotation	PF10788	NA	NA
UHGV-0196857_30	PHROG	phrog_918	NA	unknown function
UHGV-0196857_30	UniRef90	UniRef90_UPI0005DA7338	NA	NA
UHGV-0196857_30	eggNOG-mapper	1499683.CCFF01000014_gene3910	NA	NA
UHGV-0196857_30	Pfam	PF19791	NA	DUF6275
UHGV-0196857_30	Structural annotation	PF19791	NA	NA
UHGV-0196857_31	eggNOG-mapper	588581.Cpap_1521	NA	NA
UHGV-0196857_32	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0196857_32	UniRef90	UniRef90_UPI000B1AB55F	phage minor capsid protein	NA
UHGV-0196857_32	eggNOG-mapper	1305708.M9Q2F2_9CAUD	Phage minor capsid protein 2	NA
UHGV-0196857_32	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0196857_33	PHROG	phrog_533	portal protein	head and packaging
UHGV-0196857_33	UniRef90	UniRef90_A0A0A7FUH2	Phage portal, SPP1 Gp6-like family protein	NA
UHGV-0196857_33	eggNOG-mapper	1415775.U729_2601	NA	NA
UHGV-0196857_33	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0196857_34	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0196857_34	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0196857_34	UniRef90	UniRef90_A0A0H2YW07	Putative phage terminase, large subunit	NA
UHGV-0196857_34	eggNOG-mapper	1305708.M9Q2I1_9CAUD	DNA packaging	NA
UHGV-0196857_34	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0196857_34	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0196857_35	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0196857_35	PHROG	phrog_2606	terminase small subunit	head and packaging
UHGV-0196857_35	UniRef90	UniRef90_UPI0007080FC3	terminase small subunit	NA
UHGV-0196857_35	eggNOG-mapper	1235799.C818_04216	Putative ATPase subunit of terminase (gpP-like)	NA
UHGV-0196857_35	Pfam	PF10668	Phage terminase small subunit	Phage_terminase
UHGV-0196857_35	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0196857_35	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0196857_35	Structural annotation	PF03592, PF10668, NF040601, COG3728	NA	NA
UHGV-0196857_37	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0196857_37	UniRef90	UniRef90_A0A0N6WDZ3	Putative sigma factor	NA
UHGV-0196857_37	eggNOG-mapper	195103.CPF_0945	sigma factor activity	NA
UHGV-0196857_37	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0196857_37	Structural annotation	PF05263, TIGR01636	NA	NA
UHGV-0196857_39	PHROG	phrog_8470	NA	unknown function
UHGV-0196857_39	UniRef90	UniRef90_A0A1M7BII1	PcfJ-like protein	NA
UHGV-0196857_39	eggNOG-mapper	742740.HMPREF9474_03121	PcfJ-like protein	NA
UHGV-0196857_39	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0196857_39	Structural annotation	PF14284	NA	NA
UHGV-0196857_40	Pfam	PF14058	PcfK-like protein	PcfK
UHGV-0196857_41	PHROG	phrog_3565	NA	unknown function
UHGV-0196857_42	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0196857_42	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0196857_42	UniRef90	UniRef90_A0A2Z3TRR9	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0196857_42	eggNOG-mapper	195103.CPF_0942	Endodeoxyribonuclease RusA	NA
UHGV-0196857_42	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0196857_42	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0196857_42	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0196857_43	PHROG	phrog_1455	NA	unknown function
UHGV-0196857_43	eggNOG-mapper	1391647.AVSV01000022_gene2538	NA	NA
UHGV-0196857_43	Pfam	PF21793	NA	DUF6877
UHGV-0196857_44	eggNOG-mapper	1415774.U728_746	NA	NA
UHGV-0196857_45	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0196857_45	UniRef90	UniRef90_UPI000D91C81F	GntR family transcriptional regulator	NA
UHGV-0196857_45	eggNOG-mapper	195103.CPF_0940	Transcriptional regulator	NA
UHGV-0196857_45	COG	COG2188	DNA-binding transcriptional regulator, GntR family	NA
UHGV-0196857_45	Structural annotation	PF09681, PF17214, MF_01819, TIGR01714, COG5529	NA	NA
UHGV-0196857_46	KOfam	K07455	recT; recombination protein RecT	NA
UHGV-0196857_46	PHROG	phrog_148	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0196857_46	UniRef90	UniRef90_A0A0H2YU14	RecT family protein	NA
UHGV-0196857_46	eggNOG-mapper	195103.CPF_0939	RecT family	NA
UHGV-0196857_46	Pfam	PF03837	RecT family	RecT
UHGV-0196857_46	NCBIFam	TIGR00616.1	recombinase, phage RecT family	NA
UHGV-0196857_46	COG	COG3723	Recombinational DNA repair protein RecT	NA
UHGV-0196857_46	Structural annotation	PF03837, TIGR00616, COG3723	NA	NA
UHGV-0196857_47	PHROG	phrog_434	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0196857_47	UniRef90	UniRef90_A0A127EGV0	YqaJ domain-containing protein	NA
UHGV-0196857_47	eggNOG-mapper	195103.CPF_0938	YqaJ-like viral recombinase domain	NA
UHGV-0196857_47	Pfam	PF09588	YqaJ-like viral recombinase domain	YqaJ
UHGV-0196857_47	NCBIFam	TIGR03033.1	putative phage-type endonuclease	NA
UHGV-0196857_47	COG	COG5377	Phage-related protein, predicted endonuclease	NA
UHGV-0196857_47	Structural annotation	PF09588, MF_03030, TIGR03033, COG5377	NA	NA
UHGV-0196857_48	PHROG	phrog_10625	NA	unknown function
UHGV-0196857_48	Structural annotation	PF14634	NA	NA
UHGV-0196857_52	COG	COG0433	Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domains	NA
UHGV-0196857_53	UniRef90	UniRef90_A0A6M1WKU7	BC1881 family protein	NA
UHGV-0196857_53	NCBIFam	NF033495.1	BC1881 family protein	NA
UHGV-0196857_54	PHROG	phrog_16446	NA	unknown function

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0196857	Yes	39,157 bps	28.87%	100.00%	0.9744
UHGV-1410604	No	28,696 bps	29.25%	71.84%	0.9756
UHGV-1712844	No	10,473 bps	27.80%	26.23%	0.9758