vOTU-047366

Overview

vOTU representative UHGV-0197222

No. of genomes 2

Genome length 37,578 bps

Completeness 100.00% (complete)

Host Clostridium paraputrificum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047366
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-01637 › vGENUS-04103 › vSUBGEN-21441 › vOTU-047366
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Clostridiales › Clostridiaceae › Clostridium › Clostridium paraputrificum
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0197222
BioSample	NA
Genome length	37,578 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	90.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0197222_1	KOfam	K14059	int; integrase	NA
UHGV-0197222_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0197222_1	UniRef90	UniRef90_UPI000C08D467	site-specific integrase	NA
UHGV-0197222_1	eggNOG-mapper	641107.CDLVIII_0826	Belongs to the 'phage' integrase family	NA
UHGV-0197222_1	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0197222_1	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0197222_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0197222_1	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0197222_2	PHROG	phrog_87	metallo-protease	other
UHGV-0197222_2	UniRef90	UniRef90_UPI000C0793F5	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0197222_2	eggNOG-mapper	1280692.AUJL01000009_gene2969	IrrE N-terminal-like domain	NA
UHGV-0197222_2	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0197222_2	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0197222_2	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0197222_3	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0197222_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0197222_3	UniRef90	UniRef90_UPI000C08CC91	helix-turn-helix transcriptional regulator	NA
UHGV-0197222_3	eggNOG-mapper	1280692.AUJL01000009_gene2970	Helix-turn-helix XRE-family like proteins	NA
UHGV-0197222_3	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0197222_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0197222_3	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0197222_3	Structural annotation	PF12844, MF_00584, NF041951, COG1476	NA	NA
UHGV-0197222_4	UniRef90	UniRef90_UPI000C088317	helix-turn-helix domain-containing protein	NA
UHGV-0197222_4	eggNOG-mapper	1280692.AUJL01000009_gene2973	Helix-turn-helix XRE-family like proteins	NA
UHGV-0197222_4	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0197222_4	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0197222_5	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0197222_5	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0197222_5	UniRef90	UniRef90_UPI0018A9A0C6	phage antirepressor	NA
UHGV-0197222_5	eggNOG-mapper	536233.CLO_0955	BRO family, N-terminal domain	NA
UHGV-0197222_5	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0197222_5	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0197222_5	COG	COG3617	Prophage antirepressor	NA
UHGV-0197222_5	Structural annotation	PF03374, PF02498, TIGR02681, COG3617, COG3645	NA	NA
UHGV-0197222_9	PHROG	phrog_4292	NA	unknown function
UHGV-0197222_11	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0197222_11	UniRef90	UniRef90_UPI000C086100	ERF family protein	NA
UHGV-0197222_11	eggNOG-mapper	1415775.U729_2586	ERF superfamily	NA
UHGV-0197222_11	Pfam	PF04404	ERF superfamily	ERF
UHGV-0197222_11	Structural annotation	PF04404	NA	NA
UHGV-0197222_12	PHROG	phrog_674	NA	unknown function
UHGV-0197222_12	UniRef90	UniRef90_UPI0003F6BE77	NA	NA
UHGV-0197222_12	eggNOG-mapper	1280689.AUJC01000003_gene937	NA	NA
UHGV-0197222_12	Pfam	PF07083	NA	DUF1351
UHGV-0197222_12	Structural annotation	PF07083	NA	NA
UHGV-0197222_13	KOfam	K02086	dnaD; DNA replication protein	NA
UHGV-0197222_13	PHROG	phrog_2562	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0197222_13	UniRef90	UniRef90_UPI0018A8E978	NA	NA
UHGV-0197222_13	eggNOG-mapper	1280689.AUJC01000003_gene938	NA	NA
UHGV-0197222_13	Pfam	PF14297	Lin1244/Lin1753-like, N-terminal	Lin1244_N
UHGV-0197222_13	Pfam	PF07261	Replication initiation and membrane attachment	DnaB_2
UHGV-0197222_13	NCBIFam	TIGR01446.1	DnaD domain protein	NA
UHGV-0197222_13	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0197222_13	Structural annotation	PF14297, TIGR01446, TIGR01714	NA	NA
UHGV-0197222_14	PHROG	phrog_3497	NA	unknown function
UHGV-0197222_14	UniRef90	UniRef90_A0A174EZL9	NA	NA
UHGV-0197222_14	eggNOG-mapper	1280689.AUJC01000003_gene939	NA	NA
UHGV-0197222_14	Structural annotation	COG5126	NA	NA
UHGV-0197222_15	eggNOG-mapper	1033737.CAEV01000076_gene533	NA	NA
UHGV-0197222_17	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0197222_17	eggNOG-mapper	1280692.AUJL01000025_gene2095	NA	NA
UHGV-0197222_17	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0197222_18	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0197222_18	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0197222_18	UniRef90	UniRef90_UPI000EA0991F	single-stranded DNA-binding protein	NA
UHGV-0197222_18	eggNOG-mapper	1280689.AUJC01000003_gene949	Single-stranded DNA-binding protein	NA
UHGV-0197222_18	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0197222_18	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0197222_18	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0197222_18	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0197222_18	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0197222_21	UniRef90	UniRef90_UPI00195E311F	ATPase	NA
UHGV-0197222_21	eggNOG-mapper	1294142.CINTURNW_1277	NA	NA
UHGV-0197222_23	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0197222_23	UniRef90	UniRef90_UPI001459BFD6	transcriptional regulator	NA
UHGV-0197222_23	eggNOG-mapper	1391647.AVSV01000022_gene2550	NA	NA
UHGV-0197222_23	NCBIFam	TIGR01636.1	phage transcriptional regulator, RinA family	NA
UHGV-0197222_23	Structural annotation	PF08281, MF_00245, NF001068, COG2739	NA	NA
UHGV-0197222_24	PHROG	phrog_984	NA	unknown function
UHGV-0197222_24	UniRef90	UniRef90_UPI000DD00A4C	sce7726 family protein	NA
UHGV-0197222_24	eggNOG-mapper	1291050.JAGE01000002_gene3959	NA	NA
UHGV-0197222_24	PADLOC	cll2	NA	NA
UHGV-0197222_24	NCBIFam	NF033832.1	sce7726 family protein	NA
UHGV-0197222_25	eggNOG-mapper	1291050.JAGE01000002_gene3960	Beta protein	NA
UHGV-0197222_25	Pfam	PF14350	Beta protein	Beta_protein
UHGV-0197222_27	PHROG	phrog_11428	NA	unknown function
UHGV-0197222_27	eggNOG-mapper	1280689.AUJC01000003_gene959	NA	NA
UHGV-0197222_27	Pfam	PF05405	Mitochondrial ATP synthase B chain precursor (ATP-synt_B)	Mt_ATP-synt_B
UHGV-0197222_28	eggNOG-mapper	1280689.AUJC01000003_gene960	NA	NA
UHGV-0197222_29	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0197222_29	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0197222_29	UniRef90	UniRef90_A0A1I2NUT6	Phage terminase small subunit	NA
UHGV-0197222_29	eggNOG-mapper	1280692.AUJL01000027_gene2167	Terminase small subunit	NA
UHGV-0197222_29	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0197222_29	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0197222_29	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0197222_30	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0197222_30	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0197222_30	UniRef90	UniRef90_A0A1B8RSV7	Terminase	NA
UHGV-0197222_30	eggNOG-mapper	1280689.AUJC01000003_gene962	Phage terminase, large subunit, PBSX family	NA
UHGV-0197222_30	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0197222_30	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0197222_30	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0197222_30	COG	COG1783	Phage terminase large subunit	NA
UHGV-0197222_30	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0197222_31	PHROG	phrog_23349	NA	unknown function
UHGV-0197222_31	UniRef90	UniRef90_U2Q2S1	Protein YopI	NA
UHGV-0197222_31	eggNOG-mapper	1294142.CINTURNW_1683	NA	NA
UHGV-0197222_32	PHROG	phrog_64	portal protein	head and packaging
UHGV-0197222_32	UniRef90	UniRef90_UPI000EA0DF01	phage portal protein	NA
UHGV-0197222_32	eggNOG-mapper	1280689.AUJC01000003_gene963	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0197222_32	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0197222_32	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0197222_32	Structural annotation	PF05133, MF_04120, TIGR01538, COG3567	NA	NA
UHGV-0197222_33	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0197222_33	UniRef90	UniRef90_A0A1B8RSU6	Phage_Mu_F domain-containing protein	NA
UHGV-0197222_33	eggNOG-mapper	1280689.AUJC01000003_gene964	Phage Mu protein F like protein	NA
UHGV-0197222_33	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0197222_33	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0197222_33	COG	COG2369	NA	NA
UHGV-0197222_33	Structural annotation	PF15542, PF04233, TIGR01641, COG2369	NA	NA
UHGV-0197222_34	eggNOG-mapper	931276.Cspa_c26890	NA	NA
UHGV-0197222_35	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0197222_35	UniRef90	UniRef90_UPI00189D679E	NA	NA
UHGV-0197222_35	eggNOG-mapper	1280689.AUJC01000003_gene966	NA	NA
UHGV-0197222_35	Pfam	PF14265	NA	DUF4355
UHGV-0197222_35	Structural annotation	PF14265	NA	NA
UHGV-0197222_36	PHROG	phrog_422	major head protein	head and packaging
UHGV-0197222_36	UniRef90	UniRef90_A0A8H9UTU9	Capsid protein	NA
UHGV-0197222_36	eggNOG-mapper	1280689.AUJC01000003_gene967	NA	NA
UHGV-0197222_36	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0197222_37	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0197222_37	UniRef90	UniRef90_UPI000829FFA7	phage head-tail connector protein	NA
UHGV-0197222_37	eggNOG-mapper	1280689.AUJC01000003_gene968	Phage gp6-like head-tail connector protein	NA
UHGV-0197222_37	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0197222_37	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0197222_38	PHROG	phrog_2168	NA	unknown function
UHGV-0197222_38	eggNOG-mapper	1280689.AUJC01000003_gene969	NA	NA
UHGV-0197222_38	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0197222_39	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0197222_39	UniRef90	UniRef90_UPI001B3C7E28	HK97 gp10 family phage protein	NA
UHGV-0197222_39	eggNOG-mapper	1280689.AUJC01000003_gene970	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0197222_39	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0197222_39	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0197222_39	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0197222_40	PHROG	phrog_78	tail terminator	connector
UHGV-0197222_40	eggNOG-mapper	1280689.AUJC01000003_gene971	NA	NA
UHGV-0197222_40	Structural annotation	PF05657	NA	NA
UHGV-0197222_41	PHROG	phrog_158	major tail protein	tail
UHGV-0197222_41	UniRef90	UniRef90_A0A1B8RSU9	Phage tail protein	NA
UHGV-0197222_41	eggNOG-mapper	1280689.AUJC01000003_gene972	Phage tail tube protein, TTP	NA
UHGV-0197222_41	Pfam	PF08813	Phage tail tube protein, TTP	Phage_tail_3
UHGV-0197222_41	Structural annotation	PF16463, TIGR02241, COG5437	NA	NA
UHGV-0197222_42	PHROG	phrog_2546	NA	unknown function
UHGV-0197222_42	eggNOG-mapper	1280689.AUJC01000003_gene973	NA	NA
UHGV-0197222_43	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0197222_43	UniRef90	UniRef90_UPI0006C0E497	NA	NA
UHGV-0197222_43	eggNOG-mapper	1280689.AUJC01000003_gene974	NA	NA
UHGV-0197222_43	Pfam	PF19591	NA	DUF6096
UHGV-0197222_43	Structural annotation	PF19591	NA	NA
UHGV-0197222_44	PHROG	phrog_2066	NA	unknown function
UHGV-0197222_44	eggNOG-mapper	1280689.AUJC01000003_gene975	NA	NA
UHGV-0197222_45	PHROG	phrog_31409	tail length tape measure protein	tail
UHGV-0197222_45	UniRef90	UniRef90_A0A1M6MXK4	Phage-related protein	NA
UHGV-0197222_45	eggNOG-mapper	1280689.AUJC01000003_gene976	phage tail tape measure protein	NA
UHGV-0197222_45	COG	COG5283	Phage-related tail protein	NA
UHGV-0197222_45	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0197222_46	PHROG	phrog_1194	NA	unknown function
UHGV-0197222_46	eggNOG-mapper	1280689.AUJC01000003_gene977	NA	NA
UHGV-0197222_46	Pfam	PF20458	NA	DUF6711
UHGV-0197222_46	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0197222_47	PHROG	phrog_6616	tail protein	tail
UHGV-0197222_47	eggNOG-mapper	1280689.AUJC01000003_gene978	Phage minor structural protein	NA
UHGV-0197222_47	COG	COG4926	Phage-related protein	NA
UHGV-0197222_47	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0197222_48	eggNOG-mapper	1280689.AUJC01000003_gene979	NA	NA
UHGV-0197222_50	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0197222_51	PHROG	phrog_199	holin	lysis
UHGV-0197222_51	UniRef90	UniRef90_A0A1C6KXX7	Phage-related holin (Lysis protein)	NA
UHGV-0197222_51	eggNOG-mapper	1280689.AUJC01000003_gene982	Bacteriophage holin family	NA
UHGV-0197222_51	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0197222_51	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0197222_51	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0197222_51	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0197222_52	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0197222_52	PHROG	phrog_435	endolysin	lysis
UHGV-0197222_52	UniRef90	UniRef90_UPI00189A73D4	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0197222_52	eggNOG-mapper	1414720.CBYM010000002_gene552	Ami_3	NA
UHGV-0197222_52	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0197222_52	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0197222_52	Structural annotation	PF01520, PF01471, MF_00562, TIGR02883, NF038080, COG0860, COG3409	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0197222	Yes	37,578 bps	29.88%	100.00%	0.9589
UHGV-1532951	No	27,091 bps	30.07%	69.08%	0.9725