vOTU-047411

Overview

vOTU representative UHGV-0198406

No. of genomes 17

Genome length 31,957 bps

Completeness 100.00% (complete)

Host Ruminiclostridium E siraeum

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047411
Number of genomes	17
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-01051 › vGENUS-01290 › vSUBGEN-24742 › vOTU-047411
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › Ruminiclostridium E › Ruminiclostridium E siraeum
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0198406
BioSample	SAMN06164433
Genome length	31,957 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	44
CDS density	85.98%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0198406_1	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0198406_2	PHROG	phrog_6616	tail protein	tail
UHGV-0198406_2	eggNOG-mapper	1499683.CCFF01000014_gene3896	Phage minor structural protein	NA
UHGV-0198406_2	COG	COG4926	Phage-related protein	NA
UHGV-0198406_2	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0198406_3	PHROG	phrog_10316	tail fiber protein	tail
UHGV-0198406_3	UniRef90	UniRef90_R6S1X0	Hep_Hag	NA
UHGV-0198406_5	eggNOG-mapper	411470.RUMGNA_00254	NA	NA
UHGV-0198406_6	KOfam	K07273	acm; lysozyme	NA
UHGV-0198406_6	PHROG	phrog_6745	endolysin	lysis
UHGV-0198406_6	UniRef90	UniRef90_A0A175A0A7	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	NA
UHGV-0198406_6	eggNOG-mapper	537007.BLAHAN_06873	Glycosyl hydrolases family 25	NA
UHGV-0198406_6	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0198406_6	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0198406_6	Structural annotation	PF01183, PF11623, COG3757, COG2139	NA	NA
UHGV-0198406_7	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0198406_7	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0198406_7	UniRef90	UniRef90_A0A174ZT75	Site-specific DNA-methyltransferase (adenine-specific)	NA
UHGV-0198406_7	eggNOG-mapper	1160721.RBI_II00519	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0198406_7	PADLOC	MTase_II_00039	Type II methyltransferase	RM
UHGV-0198406_7	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0198406_7	COG	COG0338	DNA-adenine methylase	NA
UHGV-0198406_7	Structural annotation	PF02086, MF_00934, TIGR00571, COG0338	NA	NA
UHGV-0198406_9	PHROG	phrog_17982	NA	unknown function
UHGV-0198406_9	UniRef90	UniRef90_A0A174ZZ57	NA	NA
UHGV-0198406_9	eggNOG-mapper	720554.Clocl_1541	NA	NA
UHGV-0198406_9	Pfam	PF14020	NA	DUF4236
UHGV-0198406_10	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0198406_10	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0198406_10	UniRef90	UniRef90_A0A6N4APD4	HTH cro/C1-type domain-containing protein	NA
UHGV-0198406_10	eggNOG-mapper	1160721.RBI_II00559	Peptidase S24-like	NA
UHGV-0198406_10	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0198406_10	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0198406_10	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0198406_10	Structural annotation	PF00717, PF01381, MF_00015, NF041951, NF007621, COG2932	NA	NA
UHGV-0198406_13	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0198406_13	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0198406_13	UniRef90	UniRef90_A0A174ZWN9	Transcriptional regulator, y4mF family	NA
UHGV-0198406_13	eggNOG-mapper	1235792.C808_01473	Helix-turn-helix XRE-family like proteins	NA
UHGV-0198406_13	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0198406_13	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0198406_13	Structural annotation	PF01381, NF041951, COG1396	NA	NA
UHGV-0198406_17	PHROG	phrog_310	transposase	integration and excision
UHGV-0198406_17	UniRef90	UniRef90_A0A174ZTH8	Integrase core domain	NA
UHGV-0198406_17	eggNOG-mapper	1160721.RBI_II00555	Mu transposase, C-terminal	NA
UHGV-0198406_17	PADLOC	TnsB_0_V-K	TnsB_0_V-K	CRISPR-CAS
UHGV-0198406_17	Pfam	PF00665	Integrase core domain	rve
UHGV-0198406_17	Pfam	PF09299	Mu transposase, C-terminal	Mu-transpos_C
UHGV-0198406_17	COG	COG2801	Transposase InsO and inactivated derivatives	NA
UHGV-0198406_17	Structural annotation	PF02914, PF09039, PF09299, PF21531, NF033594, TIGR01764, COG3316, COG3311	NA	NA
UHGV-0198406_18	KOfam	K02450	gspA; general secretion pathway protein A	NA
UHGV-0198406_18	PHROG	phrog_296	DNA transposition protein	integration and excision
UHGV-0198406_18	UniRef90	UniRef90_A0A175A3H1	AAA domain-containing protein	NA
UHGV-0198406_18	eggNOG-mapper	411473.RUMCAL_01909	AAA domain	NA
UHGV-0198406_18	Pfam	PF13401	AAA domain	AAA_22
UHGV-0198406_18	COG	COG2842	Bacteriophage DNA transposition protein, AAA+ family ATPase	NA
UHGV-0198406_18	Structural annotation	PF13401, MF_01407, TIGR03015, COG2842	NA	NA
UHGV-0198406_21	UniRef90	UniRef90_A0A017RV38	SpoVT-AbrB domain-containing protein	NA
UHGV-0198406_21	eggNOG-mapper	1160721.RBI_II00552	SpoVT / AbrB like domain	NA
UHGV-0198406_21	COG	COG2002	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	NA
UHGV-0198406_21	Structural annotation	PF15937, TIGR01439, NF004424, COG2002	NA	NA
UHGV-0198406_22	eggNOG-mapper	1160721.RBI_II00551	NA	NA
UHGV-0198406_22	AcrCatalog	cluster_71843	NA	NA
UHGV-0198406_23	UniRef90	UniRef90_A0A6N8H086	Regulatory protein GemA	NA
UHGV-0198406_23	eggNOG-mapper	411473.RUMCAL_01915	NA	NA
UHGV-0198406_23	Pfam	PF06252	Bacteriophage Mu, GemA protein	GemA
UHGV-0198406_23	Structural annotation	PF06252	NA	NA
UHGV-0198406_24	eggNOG-mapper	411473.RUMCAL_01916	Mor transcription activator	NA
UHGV-0198406_24	COG	COG5566	Transcriptional regulator, middle operon regulator (Mor) family	NA
UHGV-0198406_24	Structural annotation	PF08765, NF040785, COG5566	NA	NA
UHGV-0198406_25	eggNOG-mapper	411473.RUMCAL_01917	NA	NA
UHGV-0198406_26	PHROG	phrog_25462	NA	unknown function
UHGV-0198406_26	UniRef90	UniRef90_A0A3C0QMV8	Type VI secretion protein	NA
UHGV-0198406_26	eggNOG-mapper	552398.HMPREF0866_03124	NA	NA
UHGV-0198406_26	Structural annotation	PF01638, MF_01819, NF002926, COG1733	NA	NA
UHGV-0198406_27	PHROG	phrog_426	terminase small subunit	head and packaging
UHGV-0198406_27	UniRef90	UniRef90_R5GR06	PF11985 family protein	NA
UHGV-0198406_27	eggNOG-mapper	411902.CLOBOL_06314	NA	NA
UHGV-0198406_27	Pfam	PF11985	Bacteriophage Mu, Gp27	Phage_Mu_Gp27
UHGV-0198406_27	Structural annotation	PF11985	NA	NA
UHGV-0198406_28	KOfam	K02601	nusG; transcription termination/antitermination protein NusG	NA
UHGV-0198406_28	PHROG	phrog_6386	transcription antiterminator	transcription regulation
UHGV-0198406_28	UniRef90	UniRef90_A0A174ZTH1	Transcription termination factor nusG	NA
UHGV-0198406_28	eggNOG-mapper	394503.Ccel_0204	Transcription termination factor nusG	NA
UHGV-0198406_28	Pfam	PF02357	Transcription termination factor nusG	NusG
UHGV-0198406_28	COG	COG0250	Transcription termination/antitermination protein NusG	NA
UHGV-0198406_28	Structural annotation	PF02357, MF_00951, NF033641, COG0250	NA	NA
UHGV-0198406_29	eggNOG-mapper	1160721.RBI_II00544	NA	NA
UHGV-0198406_29	Structural annotation	PF07141	NA	NA
UHGV-0198406_30	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0198406_30	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0198406_30	UniRef90	UniRef90_A0A355JEL9	PBSX family phage terminase large subunit	NA
UHGV-0198406_30	eggNOG-mapper	592031.GCWU000322_00074	Phage terminase large subunit	NA
UHGV-0198406_30	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0198406_30	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0198406_30	COG	COG1783	Phage terminase large subunit	NA
UHGV-0198406_30	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0198406_31	PHROG	phrog_533	portal protein	head and packaging
UHGV-0198406_31	UniRef90	UniRef90_A0A174ZTD4	Phage portal protein, putative, A118 family	NA
UHGV-0198406_31	eggNOG-mapper	1134413.ANNK01000120_gene2031	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0198406_31	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0198406_31	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0198406_31	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0198406_32	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0198406_32	UniRef90	UniRef90_A0A174ZWV0	Phage minor capsid protein 2	NA
UHGV-0198406_32	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0198406_32	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0198406_32	COG	COG2369	NA	NA
UHGV-0198406_32	Structural annotation	PF06152	NA	NA
UHGV-0198406_33	PHROG	phrog_30343	NA	unknown function
UHGV-0198406_33	eggNOG-mapper	411473.RUMCAL_00285	NA	NA
UHGV-0198406_33	Structural annotation	PF11039, MF_02210, TIGR03585, COG1670	NA	NA
UHGV-0198406_34	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0198406_34	eggNOG-mapper	195103.CPF_0955	NA	NA
UHGV-0198406_35	PHROG	phrog_422	major head protein	head and packaging
UHGV-0198406_35	UniRef90	UniRef90_W0U896	Phage major capsid protein	NA
UHGV-0198406_35	eggNOG-mapper	1160721.RBI_II00538	NA	NA
UHGV-0198406_35	Structural annotation	PF21703, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0198406_37	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0198406_37	eggNOG-mapper	935836.JAEL01000086_gene50	NA	NA
UHGV-0198406_38	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0198406_38	UniRef90	UniRef90_A0A174ZXQ8	Minor capsid protein	NA
UHGV-0198406_38	eggNOG-mapper	1295642.H839_08324	Minor capsid protein	NA
UHGV-0198406_38	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0198406_38	COG	COG5652	VanZ-like family protein (function unknown)	NA
UHGV-0198406_38	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0198406_39	UniRef90	UniRef90_A0A174ZTE4	Minor capsid protein	NA
UHGV-0198406_39	eggNOG-mapper	1231057.AMGD01000018_gene3615	Minor capsid protein	NA
UHGV-0198406_39	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0198406_40	Structural annotation	PF12691	NA	NA
UHGV-0198406_41	PHROG	phrog_820	major tail protein	tail
UHGV-0198406_41	eggNOG-mapper	1295642.H839_08339	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0198406_41	COG	COG5492	NA	NA
UHGV-0198406_41	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0198406_42	UniRef90	UniRef90_A0A143ZVS5	Cse1 domain-containing protein	NA
UHGV-0198406_42	Structural annotation	PF10666	NA	NA
UHGV-0198406_43	PHROG	phrog_706	NA	unknown function
UHGV-0198406_43	UniRef90	UniRef90_A0A175A387	Bacteriophage Gp15 protein	NA
UHGV-0198406_43	eggNOG-mapper	1134413.ANNK01000120_gene2016	Bacteriophage Gp15 protein	NA
UHGV-0198406_43	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0198406_43	Structural annotation	PF06854	NA	NA
UHGV-0198406_44	PHROG	phrog_1272	tail length tape measure protein	tail
UHGV-0198406_44	UniRef90	UniRef90_A0A174ZXN5	Phage-related minor tail protein	NA
UHGV-0198406_44	eggNOG-mapper	1151292.QEW_4525	nuclear chromosome segregation	NA
UHGV-0198406_44	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0198406_44	COG	COG5280	Phage-related minor tail protein	NA
UHGV-0198406_44	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0198406	Yes	31,957 bps	42.58%	100.00%	0.9462
UHGV-0054096	No	36,118 bps	41.40%	99.90%	0.9395
UHGV-0392405	No	34,208 bps	42.67%	97.98%	0.9467
UHGV-1418417	No	34,267 bps	42.87%	95.83%	0.9387
UHGV-1423258	No	32,930 bps	42.70%	92.09%	0.9247
UHGV-1397104	No	32,710 bps	42.69%	91.48%	0.9414
UHGV-1478089	No	31,867 bps	42.56%	89.12%	0.9512
UHGV-0087184	No	30,492 bps	42.43%	88.87%	0.9391
UHGV-1509832	No	29,711 bps	42.52%	85.93%	0.9552
UHGV-0094293	No	43,334 bps	43.39%	84.70%	0.9347
UHGV-2155460	No	43,334 bps	43.39%	84.70%	0.9467
UHGV-0064647	No	42,454 bps	41.75%	84.63%	0.9359
UHGV-0093332	No	30,013 bps	42.71%	83.93%	0.9529
UHGV-2158608	No	25,747 bps	43.48%	72.00%	0.9316
UHGV-0102044	No	35,541 bps	42.45%	71.88%	0.9384
UHGV-0195121	No	16,214 bps	42.99%	42.43%	0.9253
UHGV-0061333	No	11,926 bps	44.11%	31.72%	0.9552