vOTU-047434

Overview

vOTU representative UHGV-0199026

No. of genomes 3

Genome length 32,645 bps

Completeness 100.00% (complete)

Host CAG-353 sp900066885

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047434
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-01332 › vGENUS-02798 › vSUBGEN-09278 › vOTU-047434
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Ruminococcaceae › CAG-353 › CAG-353 sp900066885
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199026
BioSample	NA
Genome length	32,645 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	54
CDS density	93.67%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199026_1	PHROG	phrog_16123	NA	unknown function
UHGV-0199026_1	eggNOG-mapper	1273103.NM10_00919	NA	NA
UHGV-0199026_2	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0199026_2	PHROG	phrog_95	integrase	integration and excision
UHGV-0199026_2	UniRef90	UniRef90_A0A1C6DDF2	DNA-invertase hin	NA
UHGV-0199026_2	eggNOG-mapper	1234679.BN424_92	L COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-0199026_2	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0199026_2	Pfam	PF07508	Recombinase	Recombinase
UHGV-0199026_2	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0199026_2	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0199026_3	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0199026_3	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0199026_3	UniRef90	UniRef90_A0A0D8J2T5	Repressor LexA	NA
UHGV-0199026_3	eggNOG-mapper	641112.ACOK01000103_gene520	DNA-binding helix-turn-helix protein	NA
UHGV-0199026_3	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199026_3	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0199026_4	UniRef90	UniRef90_UPI000E52936A	helix-turn-helix domain-containing protein	NA
UHGV-0199026_4	eggNOG-mapper	887929.HMP0721_1290	Helix-turn-helix domain of resolvase	NA
UHGV-0199026_4	Structural annotation	PF05339, NF041951, COG3655	NA	NA
UHGV-0199026_9	UniRef90	UniRef90_A0A1C6CWV1	DNA binding domain, excisionase family	NA
UHGV-0199026_9	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0199026_14	PHROG	phrog_824	NA	unknown function
UHGV-0199026_14	UniRef90	UniRef90_R7L0P1	VRR-NUC domain protein	NA
UHGV-0199026_14	eggNOG-mapper	411459.RUMOBE_01753	VRR-NUC domain	NA
UHGV-0199026_14	Pfam	PF08774	VRR-NUC domain	VRR_NUC
UHGV-0199026_16	PHROG	phrog_38338	NA	unknown function
UHGV-0199026_16	eggNOG-mapper	693746.OBV_24020	NA	NA
UHGV-0199026_17	PHROG	phrog_8470	NA	unknown function
UHGV-0199026_17	UniRef90	UniRef90_UPI0005D16C58	PcfJ domain-containing protein	NA
UHGV-0199026_17	eggNOG-mapper	1514668.JOOA01000001_gene226	PcfJ-like protein	NA
UHGV-0199026_17	Pfam	PF14284	PcfJ-like protein	PcfJ
UHGV-0199026_17	Structural annotation	PF14284	NA	NA
UHGV-0199026_18	PHROG	phrog_15609	NA	unknown function
UHGV-0199026_18	Structural annotation	PF11300, NF038070	NA	NA
UHGV-0199026_19	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0199026_19	eggNOG-mapper	484770.UFO1_2491	NA	NA
UHGV-0199026_19	Structural annotation	PF21578	NA	NA
UHGV-0199026_21	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0199026_21	UniRef90	UniRef90_A0A4Z0XVL0	HNH endonuclease	NA
UHGV-0199026_21	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0199026_22	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0199026_22	eggNOG-mapper	1235798.C817_02582	NA	NA
UHGV-0199026_22	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0199026_22	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0199026_26	PHROG	phrog_5889	NA	unknown function
UHGV-0199026_26	UniRef90	UniRef90_A0A1C6CVN5	Predicted HD-superfamily hydrolase	NA
UHGV-0199026_26	eggNOG-mapper	1219626.HMPREF1639_07345	metal-dependent phosphohydrolase, HD sub domain	NA
UHGV-0199026_26	COG	COG3481	3'-5' exoribonuclease YhaM, can participate in 23S rRNA maturation, HD superfamily	NA
UHGV-0199026_26	Structural annotation	PF01966, MF_01427, NF010007, COG3481	NA	NA
UHGV-0199026_27	PHROG	phrog_8684	NA	unknown function
UHGV-0199026_27	UniRef90	UniRef90_A0A374DV44	YopX domain-containing protein	NA
UHGV-0199026_27	eggNOG-mapper	1121097.JCM15093_2710	YopX protein	NA
UHGV-0199026_27	Pfam	PF09643	YopX protein	YopX
UHGV-0199026_27	NCBIFam	TIGR01671.1	phage conserved hypothetical protein TIGR01671	NA
UHGV-0199026_27	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0199026_28	PHROG	phrog_3136	NA	unknown function
UHGV-0199026_28	UniRef90	UniRef90_A0A6N7TMC2	ASCH domain-containing protein	NA
UHGV-0199026_28	eggNOG-mapper	394503.Ccel_3165	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0199026_28	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0199026_28	Structural annotation	PF04266, MF_00684, NF008917, COG4933	NA	NA
UHGV-0199026_29	PHROG	phrog_13489	NA	unknown function
UHGV-0199026_30	PHROG	phrog_2776	NA	unknown function
UHGV-0199026_30	eggNOG-mapper	411490.ANACAC_00794	NA	NA
UHGV-0199026_30	Structural annotation	PF06319, NF033832, COG5321	NA	NA
UHGV-0199026_31	PHROG	phrog_25176	NA	unknown function
UHGV-0199026_31	eggNOG-mapper	1450525.JATV01000019_gene2409	NA	NA
UHGV-0199026_35	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0199026_35	UniRef90	UniRef90_A0A1C6CWA5	Phage terminase-like protein, large subunit	NA
UHGV-0199026_35	eggNOG-mapper	665956.HMPREF1032_00123	Phage terminase-like protein large subunit	NA
UHGV-0199026_35	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0199026_35	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0199026_35	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0199026_35	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0199026_36	eggNOG-mapper	1219626.HMPREF1639_07460	NA	NA
UHGV-0199026_37	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0199026_38	PHROG	phrog_749	NA	unknown function
UHGV-0199026_38	Structural annotation	PF05135	NA	NA
UHGV-0199026_40	PHROG	phrog_12	portal protein	head and packaging
UHGV-0199026_40	UniRef90	UniRef90_A0A1C6CV57	Phage portal protein, HK97 family	NA
UHGV-0199026_40	eggNOG-mapper	1415774.U728_1254	Phage portal protein	NA
UHGV-0199026_40	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0199026_40	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0199026_40	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0199026_40	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0199026_41	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0199026_41	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0199026_41	UniRef90	UniRef90_A0A1C6CUX6	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0199026_41	eggNOG-mapper	349161.Dred_2605	Belongs to the peptidase S14 family	NA
UHGV-0199026_41	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0199026_41	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0199026_41	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0199026_42	PHROG	phrog_10	major head protein	head and packaging
UHGV-0199026_42	UniRef90	UniRef90_A0A1C6CV16	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0199026_42	eggNOG-mapper	349161.Dred_2604	Phage capsid family	NA
UHGV-0199026_42	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0199026_42	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0199026_42	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0199026_42	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0199026_43	Structural annotation	PF05657, MF_00281, COG0016	NA	NA
UHGV-0199026_44	eggNOG-mapper	457421.CBFG_03714	NA	NA
UHGV-0199026_45	PHROG	phrog_3981	tail length tape measure protein	tail
UHGV-0199026_45	UniRef90	UniRef90_A0A1C6CVP4	Phage-related protein	NA
UHGV-0199026_45	eggNOG-mapper	431943.CKL_2631	tape measure	NA
UHGV-0199026_45	Pfam	PF09802	Preprotein translocase subunit Sec66	Sec66
UHGV-0199026_45	COG	COG5185	Chromosome segregation protein NDC80, interacts with SMC proteins	NA
UHGV-0199026_46	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0199026_47	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0199026_50	UniRef90	UniRef90_A0A6S6XJ17	FHA domain-containing protein	NA
UHGV-0199026_50	eggNOG-mapper	665950.HMPREF1025_01559	NA	NA
UHGV-0199026_50	Pfam	PF19789	NA	DUF6273
UHGV-0199026_51	PHROG	phrog_17180	NA	unknown function
UHGV-0199026_51	eggNOG-mapper	1200557.JHWV01000006_gene1699	NA	NA
UHGV-0199026_52	PHROG	phrog_199	holin	lysis
UHGV-0199026_52	UniRef90	UniRef90_A0A1C6GH21	Phage-related holin (Lysis protein)	NA
UHGV-0199026_52	eggNOG-mapper	411459.RUMOBE_01714	Bacteriophage holin family	NA
UHGV-0199026_52	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0199026_52	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0199026_52	COG	COG4824	Phage-related holin (Lysis protein)	NA
UHGV-0199026_52	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0199026_53	KOfam	K07273	acm; lysozyme	NA
UHGV-0199026_53	PHROG	phrog_6219	endolysin	lysis
UHGV-0199026_53	UniRef90	UniRef90_A0A1C6GH19	Autolytic lysozyme	NA
UHGV-0199026_53	eggNOG-mapper	641112.ACOK01000108_gene1814	hydrolase, family 25	NA
UHGV-0199026_53	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0199026_53	COG	COG3757	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	NA
UHGV-0199026_53	Structural annotation	PF01183, NF002575, COG3757	NA	NA
UHGV-0199026_54	PHROG	phrog_13890	NA	unknown function
UHGV-0199026_54	UniRef90	UniRef90_E6UHB7	Arc domain-containing protein	NA
UHGV-0199026_54	eggNOG-mapper	697329.Rumal_2725	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199026	Yes	32,645 bps	48.41%	100.00%	0.9630
UHGV-0173727	No	36,319 bps	47.75%	95.20%	0.9652
UHGV-0175959	No	32,653 bps	48.42%	85.59%	0.9608