vOTU-047457

Overview

vOTU representative UHGV-0199498

No. of genomes 3

Genome length 32,829 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047457
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00200 › vGENUS-02664 › vSUBGEN-06056 › vOTU-047457
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199498
BioSample	SAMN05414973
Genome length	32,829 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	47
CDS density	91.11%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199498_1	PHROG	phrog_24451	NA	unknown function
UHGV-0199498_1	eggNOG-mapper	1408437.JNJN01000040_gene189	NA	NA
UHGV-0199498_2	PHROG	phrog_30034	NA	unknown function
UHGV-0199498_2	UniRef90	UniRef90_R6RWR8	Carbohydrate binding domain protein	NA
UHGV-0199498_2	eggNOG-mapper	411460.RUMTOR_02099	NA	NA
UHGV-0199498_2	Pfam	PF02839	Carbohydrate-binding module family 5/12	CBM_5_12
UHGV-0199498_2	Structural annotation	PF14600	NA	NA
UHGV-0199498_3	PHROG	phrog_4105	NA	unknown function
UHGV-0199498_3	UniRef90	UniRef90_A0A8D9UHA9	Holin protein	NA
UHGV-0199498_3	eggNOG-mapper	411460.RUMTOR_01326	NA	NA
UHGV-0199498_4	PHROG	phrog_881	holin	lysis
UHGV-0199498_4	UniRef90	UniRef90_A0A8D9PDR9	Holin	NA
UHGV-0199498_4	eggNOG-mapper	1229517.AMFD01000023_gene1299	Putative phage holin Dp-1	NA
UHGV-0199498_4	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0199498_4	Structural annotation	PF16938, COG3237	NA	NA
UHGV-0199498_5	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0199498_5	PHROG	phrog_435	endolysin	lysis
UHGV-0199498_5	UniRef90	UniRef90_A0A810PUG7	SPOR domain-containing protein	NA
UHGV-0199498_5	eggNOG-mapper	697281.Mahau_0053	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0199498_5	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0199498_5	Pfam	PF05036	SPOR domain	SPOR
UHGV-0199498_5	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0199498_5	Structural annotation	PF01520, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0199498_6	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0199498_6	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0199498_6	eggNOG-mapper	1499683.CCFF01000016_gene880	Helix-turn-helix XRE-family like proteins	NA
UHGV-0199498_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199498_6	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0199498_6	Structural annotation	PF01381, MF_02017, NF041951, COG1476	NA	NA
UHGV-0199498_8	KOfam	K14059	int; integrase	NA
UHGV-0199498_8	PHROG	phrog_1	integrase	integration and excision
UHGV-0199498_8	UniRef90	UniRef90_A0A810Q0Y2	Tyr recombinase domain-containing protein	NA
UHGV-0199498_8	eggNOG-mapper	693746.OBV_43340	Belongs to the 'phage' integrase family	NA
UHGV-0199498_8	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199498_8	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0199498_8	Structural annotation	PF00589, PF13495, MF_02055, TIGR02225, COG4974	NA	NA
UHGV-0199498_9	UniRef90	UniRef90_A0A8D9UHA6	Helix-turn-helix XRE-family like protein	NA
UHGV-0199498_9	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199498_9	Structural annotation	PF12844, MF_00535, TIGR03070, COG1396	NA	NA
UHGV-0199498_10	UniRef90	UniRef90_A0A8D9PDV2	DNA methyl phosphotriester repair domain protein	NA
UHGV-0199498_10	eggNOG-mapper	1195236.CTER_1175	competence protein COMEC	NA
UHGV-0199498_10	COG	COG2333	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	NA
UHGV-0199498_11	PHROG	phrog_17982	NA	unknown function
UHGV-0199498_11	eggNOG-mapper	720554.Clocl_1541	NA	NA
UHGV-0199498_11	Pfam	PF14020	NA	DUF4236
UHGV-0199498_12	UniRef90	UniRef90_A0A1Y4C9D7	HTH cro/C1-type domain-containing protein	NA
UHGV-0199498_12	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0199498_12	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0199498_14	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0199498_14	UniRef90	UniRef90_A0A4S2H5B4	XRE family transcriptional regulator	NA
UHGV-0199498_14	eggNOG-mapper	1235797.C816_00263	helix-turn-helix	NA
UHGV-0199498_14	Pfam	PF13443	Cro/C1-type HTH DNA-binding domain	HTH_26
UHGV-0199498_14	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0199498_14	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-0199498_15	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0199498_15	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0199498_15	UniRef90	UniRef90_R5XZP2	Transcriptional regulator	NA
UHGV-0199498_15	eggNOG-mapper	1461579.CCNK01000027_gene864	Helix-turn-helix XRE-family like proteins	NA
UHGV-0199498_15	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199498_15	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0199498_16	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0199498_16	UniRef90	UniRef90_A0A1Y4UUM6	DNA-binding protein	NA
UHGV-0199498_16	eggNOG-mapper	742738.HMPREF9460_00847	Helix-turn-helix XRE-family like proteins	NA
UHGV-0199498_16	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0199498_16	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0199498_16	Structural annotation	PF01381, MF_00535, NF040522, COG1476	NA	NA
UHGV-0199498_17	eggNOG-mapper	693746.OBV_43260	NA	NA
UHGV-0199498_18	PHROG	phrog_19658	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0199498_18	UniRef90	UniRef90_UPI000F7B2FCE	helix-turn-helix domain-containing protein	NA
UHGV-0199498_18	eggNOG-mapper	742738.HMPREF9460_00851	Helix-turn-helix domain	NA
UHGV-0199498_18	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0199498_18	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0199498_20	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0199498_20	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0199498_20	UniRef90	UniRef90_A0A1Y3RP11	DNA helicase	NA
UHGV-0199498_20	eggNOG-mapper	1007096.BAGW01000033_gene1616	DnaB-like helicase N terminal domain	NA
UHGV-0199498_20	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0199498_20	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0199498_20	COG	COG0305	Replicative DNA helicase	NA
UHGV-0199498_20	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-0199498_21	Structural annotation	COG2139	NA	NA
UHGV-0199498_22	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0199498_22	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0199498_22	UniRef90	UniRef90_UPI000318E277	ParA family protein	NA
UHGV-0199498_22	eggNOG-mapper	1226322.HMPREF1545_00097	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0199498_22	Pfam	PF13614	AAA domain	AAA_31
UHGV-0199498_22	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0199498_22	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0199498_23	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0199498_23	PHROG	phrog_27290	NA	unknown function
UHGV-0199498_23	UniRef90	UniRef90_UPI0003130F10	ParB N-terminal domain-containing protein	NA
UHGV-0199498_23	eggNOG-mapper	1007096.BAGW01000033_gene1613	ParB-like nuclease domain	NA
UHGV-0199498_23	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0199498_23	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0199498_23	Structural annotation	PF02195, MF_02015, TIGR04285, COG1475	NA	NA
UHGV-0199498_28	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0199498_28	eggNOG-mapper	693746.OBV_19950	NA	NA
UHGV-0199498_28	Structural annotation	PF11726	NA	NA
UHGV-0199498_29	PHROG	phrog_119	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0199498_29	UniRef90	UniRef90_G9YSB5	HNH domain-containing protein	NA
UHGV-0199498_29	eggNOG-mapper	1235792.C808_00081	HNH nucleases	NA
UHGV-0199498_29	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0199498_29	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0199498_30	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0199498_30	PHROG	phrog_21498	NA	unknown function
UHGV-0199498_30	UniRef90	UniRef90_A0A7X2P836	ParB domain-containing protein	NA
UHGV-0199498_30	eggNOG-mapper	469378.Ccur_02830	DNA binding	NA
UHGV-0199498_30	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0199498_30	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0199498_30	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0199498_30	Structural annotation	PF02195, PF05869, MF_02015, TIGR00180, TIGR01712, COG1475	NA	NA
UHGV-0199498_31	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0199498_31	UniRef90	UniRef90_UPI00195E8788	P27 family phage terminase small subunit	NA
UHGV-0199498_31	eggNOG-mapper	1265845.PWEIH_00610	Phage terminase, small subunit	NA
UHGV-0199498_31	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0199498_31	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0199498_32	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0199498_32	UniRef90	UniRef90_UPI0018737C02	terminase large subunit	NA
UHGV-0199498_32	eggNOG-mapper	1235792.C808_00083	Phage terminase-like protein large subunit	NA
UHGV-0199498_32	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0199498_32	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0199498_32	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0199498_32	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0199498_33	PHROG	phrog_12	portal protein	head and packaging
UHGV-0199498_33	UniRef90	UniRef90_UPI0018755FA4	phage portal protein	NA
UHGV-0199498_33	eggNOG-mapper	610130.Closa_0742	Phage portal protein, HK97 family	NA
UHGV-0199498_33	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0199498_33	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0199498_33	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0199498_33	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0199498_34	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0199498_34	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0199498_34	UniRef90	UniRef90_A0A1Y4BT12	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0199498_34	eggNOG-mapper	349161.Dred_2605	Belongs to the peptidase S14 family	NA
UHGV-0199498_34	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0199498_34	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0199498_34	Structural annotation	PF00574, MF_00444, TIGR00493, COG0740	NA	NA
UHGV-0199498_35	PHROG	phrog_10	major head protein	head and packaging
UHGV-0199498_35	UniRef90	UniRef90_G9YSC0	Cadherin-like domain-containing protein	NA
UHGV-0199498_35	eggNOG-mapper	1235792.C808_00086	Phage capsid family	NA
UHGV-0199498_35	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0199498_35	Pfam	PF12733	Cadherin-like beta sandwich domain	Cadherin-like
UHGV-0199498_35	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0199498_35	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0199498_35	Structural annotation	PF05065, PF12733, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0199498_36	PHROG	phrog_749	NA	unknown function
UHGV-0199498_36	UniRef90	UniRef90_UPI001C0FB8A8	head-tail connector protein	NA
UHGV-0199498_36	eggNOG-mapper	349161.Dred_2603	NA	NA
UHGV-0199498_37	PHROG	phrog_19734	NA	unknown function
UHGV-0199498_37	UniRef90	UniRef90_A0A6I7GNS7	Phage head closure protein	NA
UHGV-0199498_37	eggNOG-mapper	1235798.C817_04587	NA	NA
UHGV-0199498_37	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0199498_38	eggNOG-mapper	1235798.C817_04588	NA	NA
UHGV-0199498_38	Structural annotation	PF05657	NA	NA
UHGV-0199498_39	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0199498_39	UniRef90	UniRef90_A0A1C6FG30	Phage protein, HK97 gp10 family	NA
UHGV-0199498_39	eggNOG-mapper	908340.HMPREF9406_2573	NA	NA
UHGV-0199498_39	Structural annotation	TIGR01725	NA	NA
UHGV-0199498_40	PHROG	phrog_88	major tail protein	tail
UHGV-0199498_40	UniRef90	UniRef90_A0A1C6CIL7	Phage major tail protein, phi13 family	NA
UHGV-0199498_40	eggNOG-mapper	33035.JPJF01000039_gene278	NA	NA
UHGV-0199498_40	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0199498_40	Structural annotation	PF06488, TIGR01603, COG3498	NA	NA
UHGV-0199498_43	PHROG	phrog_6900	tail length tape measure protein	tail
UHGV-0199498_43	UniRef90	UniRef90_A0A7X8M4B4	Phage tail protein (Fragment)	NA
UHGV-0199498_43	eggNOG-mapper	1216932.CM240_0625	tape measure	NA
UHGV-0199498_43	COG	COG5283	Phage-related tail protein	NA
UHGV-0199498_43	Structural annotation	PF05537, MF_04138, COG5281	NA	NA
UHGV-0199498_44	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0199498_44	UniRef90	UniRef90_A0A173Z1X4	Phage-related protein	NA
UHGV-0199498_44	eggNOG-mapper	1123263.AUKY01000068_gene490	tail component	NA
UHGV-0199498_44	COG	COG4722	Phage-related protein YomH	NA
UHGV-0199498_44	Structural annotation	PF20195, TIGR01633, COG4722	NA	NA
UHGV-0199498_45	PHROG	phrog_1067	minor head protein	head and packaging
UHGV-0199498_45	UniRef90	UniRef90_A0A316NPB5	Peptidase S74 domain-containing protein	NA
UHGV-0199498_45	eggNOG-mapper	1123263.AUKY01000068_gene489	Phage minor structural protein	NA
UHGV-0199498_45	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0199498_45	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0199498_45	COG	COG4926	Phage-related protein	NA
UHGV-0199498_45	Structural annotation	PF14594, TIGR01665, COG4926	NA	NA
UHGV-0199498_46	Structural annotation	PF17642	NA	NA
UHGV-0199498_47	PHROG	phrog_19280	NA	unknown function
UHGV-0199498_47	eggNOG-mapper	1408437.JNJN01000002_gene1389	NA	NA
UHGV-0199498_47	Structural annotation	PF10651, PF04862, TIGR04362, COG5513	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199498	Yes	32,829 bps	59.46%	100.00%	0.9794
UHGV-0144379	No	30,284 bps	59.71%	88.37%	0.9803
UHGV-1467597	No	20,520 bps	59.73%	60.17%	0.9767