vOTU-047465

Overview

vOTU representative UHGV-0199811

No. of genomes 1

Genome length 42,569 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047465
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-01321 › vGENUS-14508 › vSUBGEN-24417 › vOTU-047465
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199811
BioSample	SAMN09781684
Genome length	42,569 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	93.52%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199811_3	Structural annotation	NF040595	NA	NA
UHGV-0199811_6	PHROG	phrog_7566	NA	unknown function
UHGV-0199811_6	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-0199811_6	eggNOG-mapper	693746.OBV_25470	NA	NA
UHGV-0199811_7	eggNOG-mapper	1519439.JPJG01000060_gene1868	NA	NA
UHGV-0199811_9	Structural annotation	PF21327	NA	NA
UHGV-0199811_10	PHROG	phrog_3292	NA	unknown function
UHGV-0199811_10	UniRef90	UniRef90_UPI001BCDFE46	KTSC domain-containing protein	NA
UHGV-0199811_10	Pfam	PF13619	KTSC domain	KTSC
UHGV-0199811_10	NCBIFam	NF033223.2	YHYH domain-containing protein	NA
UHGV-0199811_10	COG	COG5492	NA	NA
UHGV-0199811_12	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0199811_12	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0199811_12	UniRef90	UniRef90_A0A1C6CFH8	Putative zinc finger/helix-turn-helix protein, YgiT family	NA
UHGV-0199811_12	eggNOG-mapper	903814.ELI_1263	Helix-turn-helix domain	NA
UHGV-0199811_12	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199811_12	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0199811_12	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0199811_14	UniRef90	UniRef90_A0A810PZB1	HTH cro/C1-type domain-containing protein	NA
UHGV-0199811_14	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199811_14	Structural annotation	PF12844, MF_00535, TIGR03070, COG1396	NA	NA
UHGV-0199811_15	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0199811_15	PHROG	phrog_95	integrase	integration and excision
UHGV-0199811_15	UniRef90	UniRef90_G4KP73	Putative site-specific recombinase	NA
UHGV-0199811_15	eggNOG-mapper	693746.OBV_21880	Resolvase, N terminal domain	NA
UHGV-0199811_15	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0199811_15	Pfam	PF07508	Recombinase	Recombinase
UHGV-0199811_15	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0199811_15	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0199811_15	Structural annotation	PF07508, PF00239, NF041201, COG1961	NA	NA
UHGV-0199811_16	UniRef90	UniRef90_A0A843GWV6	Rubrerythrin domain-containing protein	NA
UHGV-0199811_16	Structural annotation	PF02255, NF007156, COG1447	NA	NA
UHGV-0199811_18	UniRef90	UniRef90_A0A1Y3RJS2	Sigma70_r4_2 domain-containing protein	NA
UHGV-0199811_19	KOfam	K01448	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0199811_19	PHROG	phrog_435	endolysin	lysis
UHGV-0199811_19	UniRef90	UniRef90_A0A810PZ73	SPOR domain-containing protein	NA
UHGV-0199811_19	eggNOG-mapper	697281.Mahau_0598	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0199811_19	Pfam	PF01520	N-acetylmuramoyl-L-alanine amidase	Amidase_3
UHGV-0199811_19	Pfam	PF08230	CW_7 repeat	CW_7
UHGV-0199811_19	Pfam	PF05036	SPOR domain	SPOR
UHGV-0199811_19	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0199811_19	Structural annotation	PF01520, PF08230, MF_00562, TIGR02883, COG0860	NA	NA
UHGV-0199811_20	PHROG	phrog_1129	holin	lysis
UHGV-0199811_20	UniRef90	UniRef90_A0A810PUU2	Holin	NA
UHGV-0199811_20	eggNOG-mapper	1410668.JNKC01000001_gene1676	Phage holin family Hol44, in holin superfamily V	NA
UHGV-0199811_20	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0199811_20	Structural annotation	PF06946	NA	NA
UHGV-0199811_21	PHROG	phrog_1863	NA	unknown function
UHGV-0199811_21	eggNOG-mapper	718252.FP2_04900	NA	NA
UHGV-0199811_22	Structural annotation	NF033746, COG3764	NA	NA
UHGV-0199811_23	PHROG	phrog_240	head protein	head and packaging
UHGV-0199811_23	COG	COG3405	Endo-1,4-beta-D-glucanase Y	NA
UHGV-0199811_27	KOfam	K24213	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	NA
UHGV-0199811_27	PHROG	phrog_6320	tail fiber protein	tail
UHGV-0199811_27	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0199811_28	PHROG	phrog_22978	NA	unknown function
UHGV-0199811_28	eggNOG-mapper	1410650.JHWL01000003_gene2814	NA	NA
UHGV-0199811_28	Pfam	PF18838	Large polyvalent protein associated domain 23	LPD23
UHGV-0199811_29	PHROG	phrog_2649	endolysin	lysis
UHGV-0199811_29	UniRef90	UniRef90_A0A810PWK0	PG_binding_1 domain-containing protein	NA
UHGV-0199811_29	eggNOG-mapper	1121422.AUMW01000012_gene2977	Cell wall hydrolase	NA
UHGV-0199811_29	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0199811_29	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0199811_29	Structural annotation	PF01471, TIGR02869, COG3409	NA	NA
UHGV-0199811_30	PHROG	phrog_372	tail protein	tail
UHGV-0199811_30	UniRef90	UniRef90_A0A3E3E6C0	Pilus assembly protein	NA
UHGV-0199811_30	eggNOG-mapper	1235802.C823_05263	NA	NA
UHGV-0199811_30	Pfam	PF05895	NA	DUF859
UHGV-0199811_30	COG	COG4675	Phage tail collar domain	NA
UHGV-0199811_30	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-0199811_31	Structural annotation	NF038340	NA	NA
UHGV-0199811_32	PHROG	phrog_511	internal virion protein	head and packaging
UHGV-0199811_32	eggNOG-mapper	1226322.HMPREF1545_00785	NA	NA
UHGV-0199811_32	Structural annotation	PF11134, TIGR03300, NF038126, COG1520	NA	NA
UHGV-0199811_33	PHROG	phrog_12105	NA	unknown function
UHGV-0199811_33	eggNOG-mapper	1226322.HMPREF1545_03850	NA	NA
UHGV-0199811_35	PHROG	phrog_1357	major head protein	head and packaging
UHGV-0199811_35	UniRef90	UniRef90_A0A2V2CFL5	N4-gp56 family major capsid protein	NA
UHGV-0199811_35	eggNOG-mapper	1410650.JHWL01000003_gene2830	NA	NA
UHGV-0199811_35	Pfam	PF13252	NA	DUF4043
UHGV-0199811_35	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0199811_35	Structural annotation	PF13252, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0199811_36	PHROG	phrog_13908	NA	unknown function
UHGV-0199811_36	eggNOG-mapper	1410650.JHWL01000003_gene2831	NA	NA
UHGV-0199811_37	KOfam	K07584	NA	NA
UHGV-0199811_37	PHROG	phrog_4478	peptidase	other
UHGV-0199811_37	UniRef90	UniRef90_UPI001D097508	ribosomal-processing cysteine protease Prp	NA
UHGV-0199811_37	eggNOG-mapper	555088.DealDRAFT_1009	Pfam:Peptidase_C108	NA
UHGV-0199811_37	Pfam	PF04327	Cysteine protease Prp	Peptidase_Prp
UHGV-0199811_37	COG	COG2868	NA	NA
UHGV-0199811_37	Structural annotation	PF04327, NF011133, COG2868	NA	NA
UHGV-0199811_38	PHROG	phrog_156	portal protein	head and packaging
UHGV-0199811_38	eggNOG-mapper	1410650.JHWL01000003_gene2833	NA	NA
UHGV-0199811_38	Structural annotation	PF16510, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-0199811_39	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0199811_39	PHROG	phrog_979	terminase large subunit	head and packaging
UHGV-0199811_39	UniRef90	UniRef90_A0A810Q5R0	Phage terminase large subunit	NA
UHGV-0199811_39	eggNOG-mapper	1410650.JHWL01000003_gene2834	NA	NA
UHGV-0199811_39	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0199811_39	COG	COG1783	Phage terminase large subunit	NA
UHGV-0199811_39	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0199811_40	UniRef90	UniRef90_UPI00141260EC	helix-turn-helix domain-containing protein	NA
UHGV-0199811_40	eggNOG-mapper	1235790.C805_00037	NA	NA
UHGV-0199811_40	Structural annotation	PF13542	NA	NA
UHGV-0199811_42	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0199811_42	eggNOG-mapper	1226322.HMPREF1545_03841	NA	NA
UHGV-0199811_42	Structural annotation	PF01446, NF041486	NA	NA
UHGV-0199811_43	PHROG	phrog_5781	NA	unknown function
UHGV-0199811_43	UniRef90	UniRef90_A0A413FXK8	NA	NA
UHGV-0199811_43	eggNOG-mapper	1397284.AYMN01000083_gene2419	NA	NA
UHGV-0199811_43	Pfam	PF14359	NA	DUF4406
UHGV-0199811_43	COG	COG3613	Nucleoside 2-deoxyribosyltransferase	NA
UHGV-0199811_43	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0199811_45	PHROG	phrog_3136	NA	unknown function
UHGV-0199811_45	UniRef90	UniRef90_A0A3D0HBD2	ASCH domain-containing protein	NA
UHGV-0199811_45	eggNOG-mapper	97139.C824_00742	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	NA
UHGV-0199811_45	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0199811_45	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0199811_46	PHROG	phrog_38832	NA	unknown function
UHGV-0199811_46	eggNOG-mapper	665956.HMPREF1032_00143	NA	NA
UHGV-0199811_49	PHROG	phrog_13621	NA	unknown function
UHGV-0199811_49	UniRef90	UniRef90_A0A4U9D9M9	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0199811_49	eggNOG-mapper	1519439.JPJG01000060_gene1872	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0199811_49	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0199811_50	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0199811_50	PHROG	phrog_29443	NA	unknown function
UHGV-0199811_50	UniRef90	UniRef90_A0A350THX9	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0199811_50	eggNOG-mapper	1121334.KB911073_gene1852	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	NA
UHGV-0199811_50	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0199811_50	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0199811_50	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0199811_50	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0199811_51	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0199811_51	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0199811_51	UniRef90	UniRef90_A0A2U1CFM2	Methyltransferase	NA
UHGV-0199811_51	eggNOG-mapper	658655.HMPREF0988_00878	DNA methylase	NA
UHGV-0199811_51	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0199811_51	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0199811_51	COG	COG0863	DNA modification methylase	NA
UHGV-0199811_51	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199811	Yes	42,569 bps	58.47%	100.00%	0.9813