vOTU-047466

Overview

vOTU representative UHGV-0199816

No. of genomes 3

Genome length 46,556 bps

Completeness 100.00% (complete)

Host Fusicatenibacter saccharivorans

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047466
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 › vSUBFAM-00844 › vGENUS-00723 › vSUBGEN-03273 › vOTU-047466
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Fusicatenibacter › Fusicatenibacter saccharivorans
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199816
BioSample	SAMN09781684
Genome length	46,556 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	69
CDS density	89.95%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199816_3	Pfam	PF13455	Meiotically up-regulated gene 113	MUG113
UHGV-0199816_3	Structural annotation	PF10544	NA	NA
UHGV-0199816_4	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0199816_4	UniRef90	UniRef90_A0A412ELD4	XRE family transcriptional regulator	NA
UHGV-0199816_4	eggNOG-mapper	1235801.C822_00106	Helix-turn-helix XRE-family like proteins	NA
UHGV-0199816_4	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0199816_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199816_4	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0199816_4	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0199816_5	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0199816_5	UniRef90	UniRef90_A0A416SLU4	XRE family transcriptional regulator	NA
UHGV-0199816_5	eggNOG-mapper	476272.RUMHYD_03305	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	NA
UHGV-0199816_5	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199816_5	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0199816_5	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0199816_7	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0199816_7	UniRef90	UniRef90_A0A416RX34	XRE family transcriptional regulator	NA
UHGV-0199816_7	eggNOG-mapper	742765.HMPREF9457_02739	NA	NA
UHGV-0199816_7	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199816_7	Structural annotation	PF13560, NF041951, COG1396	NA	NA
UHGV-0199816_8	PHROG	phrog_10292	NA	unknown function
UHGV-0199816_8	UniRef90	UniRef90_A0A416RWX8	TM2 domain-containing protein	NA
UHGV-0199816_8	eggNOG-mapper	665956.HMPREF1032_00562	TM2 domain	NA
UHGV-0199816_8	Pfam	PF05154	TM2 domain	TM2
UHGV-0199816_8	COG	COG2314	NA	NA
UHGV-0199816_8	Structural annotation	PF05154, PF12773, MF_00788, NF003161	NA	NA
UHGV-0199816_9	KOfam	K14059	int; integrase	NA
UHGV-0199816_9	PHROG	phrog_1	integrase	integration and excision
UHGV-0199816_9	UniRef90	UniRef90_A0A416RX95	Site-specific integrase	NA
UHGV-0199816_9	eggNOG-mapper	33035.JPJF01000071_gene4457	Phage integrase family	NA
UHGV-0199816_9	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199816_9	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0199816_9	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0199816_10	Structural annotation	PF00196, NF040595, COG2771	NA	NA
UHGV-0199816_11	KOfam	K19117	csd1, cas8c; CRISPR-associated protein Csd1	NA
UHGV-0199816_11	UniRef90	UniRef90_UPI001570630B	type I-C CRISPR-associated protein Cas8c/Csd1	NA
UHGV-0199816_11	eggNOG-mapper	469381.Dpep_1072	CRISPR-associated protein (Cas_Csd1)	NA
UHGV-0199816_11	PADLOC	cd09757	CAS-I-C; effector_LS	CRISPR-CAS
UHGV-0199816_11	Pfam	PF09709	CRISPR-associated protein (Cas_Csd1)	Cas_Csd1
UHGV-0199816_11	COG	COG5632	N-acetylmuramoyl-L-alanine amidase CwlA	NA
UHGV-0199816_11	Structural annotation	PF09709, TIGR01863	NA	NA
UHGV-0199816_13	PHROG	phrog_14030	NA	unknown function
UHGV-0199816_13	UniRef90	UniRef90_A0A174JX56	Spore cortex-lytic enzyme	NA
UHGV-0199816_13	eggNOG-mapper	742741.HMPREF9475_00446	NA	NA
UHGV-0199816_13	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0199816_13	Structural annotation	PF01471, COG3409	NA	NA
UHGV-0199816_14	PHROG	phrog_199	holin	lysis
UHGV-0199816_14	UniRef90	UniRef90_A0A373MZ88	Holin	NA
UHGV-0199816_14	eggNOG-mapper	411460.RUMTOR_02100	NA	NA
UHGV-0199816_14	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0199816_14	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0199816_14	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0199816_15	KOfam	K03733	xerC; integrase/recombinase XerC	NA
UHGV-0199816_15	PHROG	phrog_1	integrase	integration and excision
UHGV-0199816_15	UniRef90	UniRef90_A0A373N0F6	Integrase	NA
UHGV-0199816_15	eggNOG-mapper	888743.HMPREF9141_2430	Belongs to the 'phage' integrase family	NA
UHGV-0199816_15	Pfam	PF13495	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
UHGV-0199816_15	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199816_15	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0199816_15	Structural annotation	PF00589, PF02899, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0199816_16	eggNOG-mapper	349123.Lreu23DRAFT_3172	NA	NA
UHGV-0199816_16	Pfam	PF13472	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
UHGV-0199816_17	PHROG	phrog_6616	tail protein	tail
UHGV-0199816_17	UniRef90	UniRef90_UPI0015714EA8	tail fiber domain-containing protein	NA
UHGV-0199816_17	eggNOG-mapper	1121866.AUGK01000003_gene1439	Phage minor structural protein	NA
UHGV-0199816_17	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0199816_17	COG	COG4926	Phage-related protein	NA
UHGV-0199816_17	Structural annotation	PF05113, PF20010, NF033848, COG3500	NA	NA
UHGV-0199816_18	PHROG	phrog_1194	NA	unknown function
UHGV-0199816_18	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0199816_19	KOfam	K10421	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	NA
UHGV-0199816_19	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0199816_19	UniRef90	UniRef90_A0A173R880	Phage-related protein	NA
UHGV-0199816_19	eggNOG-mapper	476272.RUMHYD_01785	phage tail tape measure protein	NA
UHGV-0199816_19	COG	COG1511	NA	NA
UHGV-0199816_19	Structural annotation	PF11172	NA	NA
UHGV-0199816_20	PHROG	phrog_706	NA	unknown function
UHGV-0199816_20	UniRef90	UniRef90_UPI00156F9D1C	Gp15 family bacteriophage protein	NA
UHGV-0199816_20	eggNOG-mapper	476272.RUMHYD_01784	Bacteriophage Gp15 protein	NA
UHGV-0199816_20	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0199816_20	Structural annotation	PF06854	NA	NA
UHGV-0199816_21	PHROG	phrog_11299	NA	unknown function
UHGV-0199816_21	eggNOG-mapper	33035.JPJF01000106_gene3125	NA	NA
UHGV-0199816_21	Structural annotation	PF10666	NA	NA
UHGV-0199816_22	PHROG	phrog_3099	NA	unknown function
UHGV-0199816_22	eggNOG-mapper	476272.RUMHYD_01782	NA	NA
UHGV-0199816_22	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0199816_23	PHROG	phrog_3266	tail completion	connector
UHGV-0199816_23	eggNOG-mapper	476272.RUMHYD_01781	NA	NA
UHGV-0199816_23	Structural annotation	PF12691	NA	NA
UHGV-0199816_24	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0199816_24	UniRef90	UniRef90_UPI0008B4CFF0	minor capsid protein	NA
UHGV-0199816_24	eggNOG-mapper	476272.RUMHYD_01780	NA	NA
UHGV-0199816_24	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0199816_24	Structural annotation	PF11114	NA	NA
UHGV-0199816_25	PHROG	phrog_3366	NA	unknown function
UHGV-0199816_25	eggNOG-mapper	476272.RUMHYD_01779	NA	NA
UHGV-0199816_25	Structural annotation	PF20536, COG5614	NA	NA
UHGV-0199816_27	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0199816_27	eggNOG-mapper	476272.RUMHYD_01778	NA	NA
UHGV-0199816_28	PHROG	phrog_247	major head protein	head and packaging
UHGV-0199816_28	UniRef90	UniRef90_UPI001BA5448B	major capsid protein	NA
UHGV-0199816_28	eggNOG-mapper	33035.JPJF01000106_gene3132	NA	NA
UHGV-0199816_28	Structural annotation	PF20036, MF_04113, TIGR04387, COG4653	NA	NA
UHGV-0199816_29	UniRef90	UniRef90_UPI001C0EBA51	phage scaffolding protein	NA
UHGV-0199816_29	eggNOG-mapper	742765.HMPREF9457_02126	COG NOG36366 non supervised orthologous group	NA
UHGV-0199816_29	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0199816_31	Structural annotation	PF00210, MF_01441, NF011597, COG1528	NA	NA
UHGV-0199816_32	PHROG	phrog_20016	NA	unknown function
UHGV-0199816_32	UniRef90	UniRef90_A0A316MV88	BclA_C domain-containing protein	NA
UHGV-0199816_32	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-0199816_32	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0199816_34	eggNOG-mapper	476272.RUMHYD_01770	NA	NA
UHGV-0199816_36	PHROG	phrog_21718	NA	unknown function
UHGV-0199816_36	eggNOG-mapper	1235790.C805_00058	NA	NA
UHGV-0199816_37	UniRef90	UniRef90_A0A416S3A4	CTP synthase	NA
UHGV-0199816_37	eggNOG-mapper	476272.RUMHYD_01766	NA	NA
UHGV-0199816_38	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0199816_38	UniRef90	UniRef90_A0A416S3D5	Phage capsid protein	NA
UHGV-0199816_38	eggNOG-mapper	476272.RUMHYD_01761	Phage minor capsid protein 2	NA
UHGV-0199816_38	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0199816_38	COG	COG2369	NA	NA
UHGV-0199816_38	Structural annotation	PF06152	NA	NA
UHGV-0199816_39	PHROG	phrog_1129	holin	lysis
UHGV-0199816_39	UniRef90	UniRef90_A0A416S3E1	Enolase	NA
UHGV-0199816_39	eggNOG-mapper	742740.HMPREF9474_03522	NA	NA
UHGV-0199816_39	Pfam	PF16079	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
UHGV-0199816_39	Structural annotation	PF06946	NA	NA
UHGV-0199816_40	PHROG	phrog_533	portal protein	head and packaging
UHGV-0199816_40	UniRef90	UniRef90_A0A1C6CDM8	Phage portal protein, putative, A118 family	NA
UHGV-0199816_40	eggNOG-mapper	33035.JPJF01000106_gene3135	phage minor capsid protein	NA
UHGV-0199816_40	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0199816_42	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0199816_42	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0199816_42	UniRef90	UniRef90_A0A416ZL34	PBSX family phage terminase large subunit	NA
UHGV-0199816_42	eggNOG-mapper	397291.C804_01612	Phage terminase large subunit	NA
UHGV-0199816_42	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0199816_42	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0199816_42	COG	COG1783	Phage terminase large subunit	NA
UHGV-0199816_42	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0199816_43	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0199816_43	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0199816_43	UniRef90	UniRef90_A0A416ZL36	Terminase small subunit	NA
UHGV-0199816_43	eggNOG-mapper	476272.RUMHYD_01754	Terminase small subunit	NA
UHGV-0199816_43	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0199816_43	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0199816_43	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0199816_44	PHROG	phrog_33130	NA	unknown function
UHGV-0199816_44	Structural annotation	PF10922, MF_00839	NA	NA
UHGV-0199816_46	PHROG	phrog_8680	NA	unknown function
UHGV-0199816_46	UniRef90	UniRef90_A0A416S3B0	NA	NA
UHGV-0199816_46	eggNOG-mapper	411470.RUMGNA_02208	NA	NA
UHGV-0199816_46	Pfam	PF14386	NA	DUF4417
UHGV-0199816_46	Structural annotation	PF14386	NA	NA
UHGV-0199816_48	eggNOG-mapper	476272.RUMHYD_01751	NA	NA
UHGV-0199816_54	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0199816_54	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0199816_54	UniRef90	UniRef90_UPI000CF24562	DNA cytosine methyltransferase	NA
UHGV-0199816_54	eggNOG-mapper	1235799.C818_02656	C-5 cytosine-specific DNA methylase	NA
UHGV-0199816_54	PADLOC	MTase_II_00164	Type II methyltransferase	RM
UHGV-0199816_54	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0199816_54	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0199816_54	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0199816_55	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0199816_55	UniRef90	UniRef90_A0A2H4JC51	Putative 3'-phosphoadenosine 5'-phosphosulfatesulfotransferase/FAD synthetase-related enzyme	NA
UHGV-0199816_55	eggNOG-mapper	411461.DORFOR_01142	NA	NA
UHGV-0199816_55	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0199816_55	Structural annotation	PF01507, MF_00064, TIGR00434, COG0175	NA	NA
UHGV-0199816_58	PHROG	phrog_11769	NA	unknown function
UHGV-0199816_58	UniRef90	UniRef90_A0A416S3A2	Phage_rep_org_N domain-containing protein	NA
UHGV-0199816_58	eggNOG-mapper	411470.RUMGNA_02197	phage replisome	NA
UHGV-0199816_58	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0199816_58	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0199816_58	Structural annotation	PF09681, TIGR01714, COG3388	NA	NA
UHGV-0199816_59	PHROG	phrog_244	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0199816_59	UniRef90	UniRef90_A0A841R0Q1	Holliday junction resolvase	NA
UHGV-0199816_59	eggNOG-mapper	887929.HMP0721_1279	NA	NA
UHGV-0199816_59	Structural annotation	PF01870, MF_01490, NF040854, COG1591	NA	NA
UHGV-0199816_60	PHROG	phrog_398	NA	unknown function
UHGV-0199816_60	UniRef90	UniRef90_UPI00068C968F	putative HNHc nuclease	NA
UHGV-0199816_60	eggNOG-mapper	33035.JPJF01000122_gene2462	Putative HNHc nuclease	NA
UHGV-0199816_60	Pfam	PF16784	Putative HNHc nuclease	HNHc_6
UHGV-0199816_60	Structural annotation	PF16784	NA	NA
UHGV-0199816_61	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0199816_61	UniRef90	UniRef90_A0A396QXQ1	Recombinase	NA
UHGV-0199816_61	eggNOG-mapper	386415.NT01CX_2192	ERF superfamily	NA
UHGV-0199816_61	Pfam	PF04404	ERF superfamily	ERF
UHGV-0199816_61	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0199816_64	PHROG	phrog_4433	NA	unknown function
UHGV-0199816_64	UniRef90	UniRef90_UPI0015C58C2D	NA	NA
UHGV-0199816_64	eggNOG-mapper	886882.PPSC2_p0363	regulation of DNA-templated transcription, elongation	NA
UHGV-0199816_64	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0199816_64	Structural annotation	NF007410	NA	NA
UHGV-0199816_66	eggNOG-mapper	1235798.C817_05488	NA	NA
UHGV-0199816_68	eggNOG-mapper	596152.DesU5LDRAFT_1910	NA	NA
UHGV-0199816_68	Structural annotation	PF03787, TIGR02581, COG1604	NA	NA
UHGV-0199816_69	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0199816_69	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0199816_69	UniRef90	UniRef90_A0A416ZL48	Bro-N domain-containing protein	NA
UHGV-0199816_69	eggNOG-mapper	1122146.AUHP01000010_gene1023	BRO family, N-terminal domain	NA
UHGV-0199816_69	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0199816_69	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0199816_69	COG	COG3617	Prophage antirepressor	NA
UHGV-0199816_69	Structural annotation	PF03374, PF02498, TIGR02681, COG3645	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199816	Yes	46,556 bps	45.49%	100.00%	0.9810
UHGV-0185644	No	44,923 bps	45.02%	98.63%	0.9779
UHGV-0171531	No	27,010 bps	47.12%	59.28%	0.9817