vOTU-047467

Overview

vOTU representative UHGV-0199831

No. of genomes 2

Genome length 33,342 bps

Completeness 100.00% (complete)

Host Lachnospiraceae

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047467
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-01212 › vGENUS-01175 › vSUBGEN-24418 › vOTU-047467
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae
Host range breadth	Family
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199831
BioSample	SAMN09781730
Genome length	33,342 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	56
CDS density	90.56%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199831_3	PHROG	phrog_874	NA	unknown function
UHGV-0199831_3	UniRef90	UniRef90_A0A4P6LRJ9	ASCH domain-containing protein	NA
UHGV-0199831_3	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0199831_3	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0199831_4	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0199831_4	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0199831_4	UniRef90	UniRef90_R5G2U2	Adenylylsulfate reductase thioredoxin dependent	NA
UHGV-0199831_4	eggNOG-mapper	411490.ANACAC_02386	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0199831_4	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0199831_4	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0199831_4	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0199831_6	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0199831_6	UniRef90	UniRef90_UPI001BBBA8BA	NA	NA
UHGV-0199831_6	eggNOG-mapper	1321782.HMPREF1986_02257	NA	NA
UHGV-0199831_6	Pfam	PF14359	NA	DUF4406
UHGV-0199831_6	Structural annotation	PF14359, MF_03036, TIGR02133, COG3613	NA	NA
UHGV-0199831_7	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-0199831_7	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0199831_7	UniRef90	UniRef90_A0A7X2XHM6	Restriction alleviation protein, Lar family	NA
UHGV-0199831_7	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0199831_7	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0199831_7	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0199831_7	Structural annotation	PF14354, NF007260	NA	NA
UHGV-0199831_8	KOfam	K19779	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	NA
UHGV-0199831_8	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0199831_8	UniRef90	UniRef90_UPI0018C4DCA4	Lar family restriction alleviation protein	NA
UHGV-0199831_8	Pfam	PF14354	Restriction alleviation protein Lar	Lar_restr_allev
UHGV-0199831_8	NCBIFam	TIGR03655.1	Lar family restriction alleviation protein	NA
UHGV-0199831_8	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0199831_8	Structural annotation	PF14354, TIGR03655	NA	NA
UHGV-0199831_11	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0199831_11	UniRef90	UniRef90_A0A3R6NEA8	Sigma-70 family RNA polymerase sigma factor	NA
UHGV-0199831_11	eggNOG-mapper	742740.HMPREF9474_04310	NA	NA
UHGV-0199831_11	Structural annotation	PF07374, MF_00674, NF001074	NA	NA
UHGV-0199831_12	PHROG	phrog_309	terminase small subunit	head and packaging
UHGV-0199831_12	UniRef90	UniRef90_UPI00046706B5	transposase	NA
UHGV-0199831_12	eggNOG-mapper	742733.HMPREF9469_01828	transposase activity	NA
UHGV-0199831_12	Pfam	PF01527	Transposase	HTH_Tnp_1
UHGV-0199831_12	COG	COG2963	Transposase InsE and inactivated derivatives	NA
UHGV-0199831_12	Structural annotation	PF07141	NA	NA
UHGV-0199831_13	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0199831_13	PHROG	phrog_29775	NA	unknown function
UHGV-0199831_13	UniRef90	UniRef90_A0A316T8R1	PBSX family phage terminase large subunit	NA
UHGV-0199831_13	eggNOG-mapper	428125.CLOLEP_01804	Phage terminase, large subunit, PBSX family	NA
UHGV-0199831_13	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0199831_13	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0199831_13	COG	COG1783	Phage terminase large subunit	NA
UHGV-0199831_13	Structural annotation	PF04466, PF20441, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0199831_14	PHROG	phrog_533	portal protein	head and packaging
UHGV-0199831_14	UniRef90	UniRef90_A0A2V2F7J4	Portal protein	NA
UHGV-0199831_14	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0199831_14	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0199831_14	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0199831_14	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0199831_15	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0199831_15	UniRef90	UniRef90_UPI001E5C8078	phage minor capsid protein	NA
UHGV-0199831_15	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0199831_15	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0199831_15	COG	COG2369	NA	NA
UHGV-0199831_15	Structural annotation	PF06152	NA	NA
UHGV-0199831_16	Structural annotation	PF14530, MF_01441, NF009990, COG0783	NA	NA
UHGV-0199831_18	PHROG	phrog_422	major head protein	head and packaging
UHGV-0199831_18	UniRef90	UniRef90_A0A316T938	S-l_SbsC_C domain-containing protein	NA
UHGV-0199831_18	eggNOG-mapper	428125.CLOLEP_00183	COG NOG28280 non supervised orthologous group	NA
UHGV-0199831_18	Structural annotation	PF19821, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0199831_19	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0199831_20	UniRef90	UniRef90_UPI001D06E7F2	minor capsid protein	NA
UHGV-0199831_20	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0199831_21	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0199831_21	UniRef90	UniRef90_UPI001899C432	minor capsid protein	NA
UHGV-0199831_21	eggNOG-mapper	1214217.ALNF01000014_gene1371	Minor capsid protein	NA
UHGV-0199831_21	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0199831_21	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0199831_22	Structural annotation	PF12691	NA	NA
UHGV-0199831_23	PHROG	phrog_820	major tail protein	tail
UHGV-0199831_23	UniRef90	UniRef90_A0A3A6EPU8	S-l_SbsC_C domain-containing protein	NA
UHGV-0199831_23	eggNOG-mapper	428125.CLOLEP_00178	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0199831_23	COG	COG5492	NA	NA
UHGV-0199831_23	Structural annotation	PF06199, PF18316, TIGR02126, COG5437	NA	NA
UHGV-0199831_24	Structural annotation	PF10666	NA	NA
UHGV-0199831_25	PHROG	phrog_706	NA	unknown function
UHGV-0199831_25	UniRef90	UniRef90_UPI000C819E80	Gp15 family bacteriophage protein	NA
UHGV-0199831_25	eggNOG-mapper	1449343.JQLQ01000002_gene1325	Bacteriophage Gp15 protein	NA
UHGV-0199831_25	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0199831_25	Structural annotation	PF06854	NA	NA
UHGV-0199831_26	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0199831_26	UniRef90	UniRef90_A0A3A6E908	TMP_3 domain-containing protein	NA
UHGV-0199831_26	eggNOG-mapper	663278.Ethha_0102	Phage tail tape measure protein, TP901 family	NA
UHGV-0199831_26	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0199831_26	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0199831_26	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0199831_26	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0199831_27	UniRef90	UniRef90_R6N293	Putative phage tail component domain protein	NA
UHGV-0199831_27	COG	COG4722	Phage-related protein YomH	NA
UHGV-0199831_27	Structural annotation	PF20753, PF20195, TIGR01633, COG4722	NA	NA
UHGV-0199831_28	PHROG	phrog_5555	tail protein	tail
UHGV-0199831_28	UniRef90	UniRef90_UPI00189BED7C	phage tail protein	NA
UHGV-0199831_28	eggNOG-mapper	1347392.CCEZ01000045_gene1	Phage minor structural protein	NA
UHGV-0199831_28	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0199831_28	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0199831_28	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0199831_28	COG	COG4926	Phage-related protein	NA
UHGV-0199831_28	Structural annotation	PF06605, PF18994, TIGR01665, COG4926	NA	NA
UHGV-0199831_29	PHROG	phrog_21765	NA	unknown function
UHGV-0199831_29	UniRef90	UniRef90_A0A1C5W6G3	BppU_N domain-containing protein	NA
UHGV-0199831_29	eggNOG-mapper	476272.RUMHYD_03672	PFAM Collagen triple helix	NA
UHGV-0199831_29	COG	COG2931	Ca2+-binding protein, RTX toxin-related	NA
UHGV-0199831_30	PHROG	phrog_937	hemolysin	other
UHGV-0199831_30	eggNOG-mapper	742740.HMPREF9474_03172	NA	NA
UHGV-0199831_31	PHROG	phrog_443	holin	lysis
UHGV-0199831_31	UniRef90	UniRef90_UPI001C0212A6	holin	NA
UHGV-0199831_31	eggNOG-mapper	626523.GCWU000342_01012	Putative lactococcus lactis phage r1t holin	NA
UHGV-0199831_31	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0199831_31	Structural annotation	PF16945	NA	NA
UHGV-0199831_32	PHROG	phrog_14030	NA	unknown function
UHGV-0199831_32	UniRef90	UniRef90_A0A417IER1	PG_binding_1 domain-containing protein	NA
UHGV-0199831_32	eggNOG-mapper	1235793.C809_02691	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0199831_32	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0199831_32	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0199831_32	Structural annotation	PF01471, NF038080, COG3409	NA	NA
UHGV-0199831_35	PHROG	phrog_2329	NA	unknown function
UHGV-0199831_35	UniRef90	UniRef90_A0A1C6EQW9	SpoVT-AbrB domain-containing protein	NA
UHGV-0199831_35	eggNOG-mapper	1292035.H476_0264	NA	NA
UHGV-0199831_35	Structural annotation	PF04014, NF007312, COG2336	NA	NA
UHGV-0199831_37	KOfam	K14059	int; integrase	NA
UHGV-0199831_37	PHROG	phrog_1	integrase	integration and excision
UHGV-0199831_37	UniRef90	UniRef90_A0A1C5Z1D0	Tyrosine recombinase XerC	NA
UHGV-0199831_37	eggNOG-mapper	1280698.AUJS01000007_gene999	Phage integrase family	NA
UHGV-0199831_37	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199831_37	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0199831_37	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0199831_38	PHROG	phrog_7974	NA	unknown function
UHGV-0199831_38	eggNOG-mapper	931276.Cspa_c57370	Phage Mu protein F like protein	NA
UHGV-0199831_38	COG	COG2369	NA	NA
UHGV-0199831_39	PHROG	phrog_22683	NA	unknown function
UHGV-0199831_39	UniRef90	UniRef90_UPI00031200D9	NA	NA
UHGV-0199831_39	eggNOG-mapper	1120978.KB894087_gene405	NA	NA
UHGV-0199831_39	AcrCatalog	cluster_3962	NA	NA
UHGV-0199831_39	Pfam	PF13783	NA	DUF4177
UHGV-0199831_39	Structural annotation	PF13783, TIGR00285, COG3499	NA	NA
UHGV-0199831_40	UniRef90	UniRef90_A0A6J7L9T1	Unannotated protein	NA
UHGV-0199831_40	eggNOG-mapper	483216.BACEGG_01163	NA	NA
UHGV-0199831_41	UniRef90	UniRef90_A0A3D5TFB0	HTH cro/C1-type domain-containing protein	NA
UHGV-0199831_41	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199831_41	Structural annotation	PF13560, MF_00535, NF041951, COG1476	NA	NA
UHGV-0199831_43	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0199831_43	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0199831_43	UniRef90	UniRef90_A0A3R6UL37	XRE family transcriptional regulator	NA
UHGV-0199831_43	eggNOG-mapper	1235790.C805_00012	Helix-turn-helix domain	NA
UHGV-0199831_43	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199831_43	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0199831_43	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0199831_45	UniRef90	UniRef90_UPI00129DCFE7	HTH domain-containing protein	NA
UHGV-0199831_46	PHROG	phrog_7024	NA	unknown function
UHGV-0199831_46	eggNOG-mapper	1408437.JNJN01000033_gene2207	NA	NA
UHGV-0199831_47	KOfam	K08309	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	NA
UHGV-0199831_47	PHROG	phrog_19890	NA	unknown function
UHGV-0199831_47	UniRef90	UniRef90_A0A1C6KI68	Invasion protein IagB	NA
UHGV-0199831_47	eggNOG-mapper	1410650.JHWL01000003_gene2854	lytic transglycosylase activity	NA
UHGV-0199831_47	Pfam	PF01464	Transglycosylase SLT domain	SLT
UHGV-0199831_47	COG	COG0741	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	NA
UHGV-0199831_47	Structural annotation	PF01464, MF_01381, NF011856, COG0741	NA	NA
UHGV-0199831_49	PHROG	phrog_7838	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0199831_49	UniRef90	UniRef90_A0A8D9UGW3	DNA repair protein RAD52-like protein	NA
UHGV-0199831_49	eggNOG-mapper	742767.HMPREF9456_02052	NA	NA
UHGV-0199831_49	Structural annotation	PF04098, TIGR00607, COG4380	NA	NA
UHGV-0199831_50	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0199831_50	eggNOG-mapper	411468.CLOSCI_00314	NA	NA
UHGV-0199831_50	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0199831_51	PHROG	phrog_7566	NA	unknown function
UHGV-0199831_51	UniRef90	UniRef90_A0A8D9UHC0	Recombination enhancement function protein nuclease	NA
UHGV-0199831_51	eggNOG-mapper	693746.OBV_24070	NA	NA
UHGV-0199831_53	PHROG	phrog_428	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0199831_53	UniRef90	UniRef90_UPI0018CE184B	NA	NA
UHGV-0199831_53	eggNOG-mapper	33035.JPJF01000122_gene2459	NA	NA
UHGV-0199831_53	Pfam	PF19808	NA	DUF6291
UHGV-0199831_53	Pfam	PF09524	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
UHGV-0199831_53	NCBIFam	TIGR02220.1	phage conserved hypothetical protein, C-terminal domain	NA
UHGV-0199831_53	Structural annotation	PF19808	NA	NA
UHGV-0199831_54	Structural annotation	PF06257, MF_00754, TIGR02728, COG4466	NA	NA
UHGV-0199831_56	eggNOG-mapper	742735.HMPREF9467_00844	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199831	Yes	33,342 bps	50.46%	100.00%	0.9796
UHGV-0180723	No	33,187 bps	50.41%	99.20%	0.9786