vOTU-047468

Overview

vOTU representative UHGV-0199858

No. of genomes 11

Genome length 40,309 bps

Completeness 100.00% (complete)

Host CAG-170

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047468
Number of genomes	11
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 › vSUBFAM-00020 › vGENUS-00411 › vSUBGEN-06345 › vOTU-047468
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-170
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0199858
BioSample	SAMN09781724
Genome length	40,309 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	73
CDS density	94.55%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0199858_2	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0199858_4	PHROG	phrog_5319	outer membrane protein	other
UHGV-0199858_4	UniRef90	UniRef90_A0A3S1E765	Zinc ribbon domain-containing protein	NA
UHGV-0199858_4	eggNOG-mapper	521011.Mpal_1387	NA	NA
UHGV-0199858_4	Pfam	PF13248	zinc-ribbon domain	zf-ribbon_3
UHGV-0199858_4	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0199858_4	Structural annotation	PF03843, MF_01959, TIGR00752, NF041910, COG3390	NA	NA
UHGV-0199858_7	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0199858_7	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-0199858_8	KOfam	K14059	int; integrase	NA
UHGV-0199858_8	PHROG	phrog_1	integrase	integration and excision
UHGV-0199858_8	UniRef90	UniRef90_A0A3D3Y5E0	Integrase	NA
UHGV-0199858_8	eggNOG-mapper	693746.OBV_41260	Belongs to the 'phage' integrase family	NA
UHGV-0199858_8	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0199858_8	COG	COG4974	Site-specific recombinase XerD	NA
UHGV-0199858_8	Structural annotation	PF00589, MF_01807, TIGR02224, COG4973	NA	NA
UHGV-0199858_9	eggNOG-mapper	1226322.HMPREF1545_00079	NA	NA
UHGV-0199858_10	Structural annotation	PF12510	NA	NA
UHGV-0199858_11	PHROG	phrog_20016	NA	unknown function
UHGV-0199858_11	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0199858_11	eggNOG-mapper	1226322.HMPREF1545_00077	NA	NA
UHGV-0199858_11	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0199858_12	PHROG	phrog_16490	NA	unknown function
UHGV-0199858_12	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0199858_13	PHROG	phrog_22984	NA	unknown function
UHGV-0199858_14	PHROG	phrog_21718	NA	unknown function
UHGV-0199858_14	eggNOG-mapper	397290.C810_05210	NA	NA
UHGV-0199858_15	PHROG	phrog_3754	NA	unknown function
UHGV-0199858_15	eggNOG-mapper	1226322.HMPREF1545_00073	NA	NA
UHGV-0199858_16	Structural annotation	PF16509, MF_00245, NF001066, COG2739	NA	NA
UHGV-0199858_17	UniRef90	UniRef90_A0A358M2Y7	PG_binding_1 domain-containing protein	NA
UHGV-0199858_17	eggNOG-mapper	525254.HMPREF0072_1273	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA
UHGV-0199858_17	COG	COG0791	Cell wall-associated hydrolase, NlpC_P60 family	NA
UHGV-0199858_17	Structural annotation	NF033743	NA	NA
UHGV-0199858_18	PHROG	phrog_13256	NA	unknown function
UHGV-0199858_18	eggNOG-mapper	1226322.HMPREF1545_00166	NA	NA
UHGV-0199858_20	eggNOG-mapper	1232443.BAIA02000106_gene3111	NA	NA
UHGV-0199858_21	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0199858_21	Structural annotation	PF07484	NA	NA
UHGV-0199858_22	Pfam	PF07484	Phage Tail Collar Domain	Collar
UHGV-0199858_22	Structural annotation	PF20055, MF_03008, NF010730, COG3940	NA	NA
UHGV-0199858_23	PHROG	phrog_18725	NA	unknown function
UHGV-0199858_23	eggNOG-mapper	693746.OBV_18220	NA	NA
UHGV-0199858_24	PHROG	phrog_29409	NA	unknown function
UHGV-0199858_24	UniRef90	UniRef90_A0A2V2GQ35	Isoaspartyl peptidase	NA
UHGV-0199858_25	PHROG	phrog_37900	NA	unknown function
UHGV-0199858_25	UniRef90	UniRef90_UPI001C3EA4DF	NA	NA
UHGV-0199858_25	eggNOG-mapper	552398.HMPREF0866_03098	NA	NA
UHGV-0199858_25	Pfam	PF19789	NA	DUF6273
UHGV-0199858_25	COG	COG3827	Cell pole-organizing protein PopZ	NA
UHGV-0199858_25	Structural annotation	PF19789	NA	NA
UHGV-0199858_26	PHROG	phrog_13589	NA	unknown function
UHGV-0199858_26	eggNOG-mapper	428125.CLOLEP_01434	NA	NA
UHGV-0199858_27	PHROG	phrog_31538	NA	unknown function
UHGV-0199858_28	Structural annotation	PF10651, NF038186	NA	NA
UHGV-0199858_29	PHROG	phrog_13879	NA	unknown function
UHGV-0199858_29	eggNOG-mapper	1226322.HMPREF1545_00061	NA	NA
UHGV-0199858_29	Structural annotation	PF14594, PF03256, NF033848, COG4379, COG5156	NA	NA
UHGV-0199858_30	PHROG	phrog_1194	NA	unknown function
UHGV-0199858_30	eggNOG-mapper	411902.CLOBOL_00125	NA	NA
UHGV-0199858_30	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0199858_31	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0199858_31	UniRef90	UniRef90_A0A810PX76	Phage tail tape measure protein	NA
UHGV-0199858_31	eggNOG-mapper	1235797.C816_04182	SLT domain	NA
UHGV-0199858_31	COG	COG1511	NA	NA
UHGV-0199858_32	PHROG	phrog_706	NA	unknown function
UHGV-0199858_32	UniRef90	UniRef90_A0A2U1BEN4	Bacteriophage Gp15 protein	NA
UHGV-0199858_32	eggNOG-mapper	693746.OBV_18170	Bacteriophage Gp15 protein	NA
UHGV-0199858_32	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0199858_32	Structural annotation	PF06854	NA	NA
UHGV-0199858_33	PHROG	phrog_11299	NA	unknown function
UHGV-0199858_33	eggNOG-mapper	693746.OBV_18160	NA	NA
UHGV-0199858_33	Structural annotation	PF10666	NA	NA
UHGV-0199858_34	PHROG	phrog_3099	NA	unknown function
UHGV-0199858_34	eggNOG-mapper	1235797.C816_04186	NA	NA
UHGV-0199858_34	Structural annotation	TIGR02126	NA	NA
UHGV-0199858_35	PHROG	phrog_3266	tail completion	connector
UHGV-0199858_35	eggNOG-mapper	1232443.BAIA02000078_gene24	NA	NA
UHGV-0199858_35	Structural annotation	PF12691	NA	NA
UHGV-0199858_36	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0199858_36	UniRef90	UniRef90_UPI00195E1497	minor capsid protein	NA
UHGV-0199858_36	eggNOG-mapper	1226322.HMPREF1545_00054	Minor capsid protein	NA
UHGV-0199858_36	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0199858_36	Structural annotation	PF11114	NA	NA
UHGV-0199858_37	PHROG	phrog_3366	NA	unknown function
UHGV-0199858_37	eggNOG-mapper	1226322.HMPREF1545_00053	NA	NA
UHGV-0199858_37	Pfam	PF20536	NA	DUF6751
UHGV-0199858_37	Structural annotation	PF20536, TIGR01563	NA	NA
UHGV-0199858_38	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0199858_38	eggNOG-mapper	642492.Clole_0822	NA	NA
UHGV-0199858_39	PHROG	phrog_544	major head protein	head and packaging
UHGV-0199858_39	UniRef90	UniRef90_A0A810PZM2	S-l_SbsC_C domain-containing protein	NA
UHGV-0199858_39	eggNOG-mapper	1347392.CCEZ01000005_gene1236	NA	NA
UHGV-0199858_39	Pfam	PF18316	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
UHGV-0199858_39	Structural annotation	PF03864, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0199858_40	Structural annotation	PF06810	NA	NA
UHGV-0199858_41	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0199858_41	UniRef90	UniRef90_A0A1C5N7V1	Phage minor capsid protein 2	NA
UHGV-0199858_41	eggNOG-mapper	1226322.HMPREF1545_00046	Phage minor capsid protein 2	NA
UHGV-0199858_41	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0199858_41	COG	COG2369	NA	NA
UHGV-0199858_41	Structural annotation	PF06152	NA	NA
UHGV-0199858_42	PHROG	phrog_533	portal protein	head and packaging
UHGV-0199858_42	UniRef90	UniRef90_A0A1C5N775	Phage portal protein, putative, A118 family	NA
UHGV-0199858_42	eggNOG-mapper	1226322.HMPREF1545_00044	NA	NA
UHGV-0199858_42	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0199858_42	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0199858_43	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0199858_43	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0199858_43	UniRef90	UniRef90_A0A0X8VAD6	Terminase-like family protein	NA
UHGV-0199858_43	eggNOG-mapper	1449050.JNLE01000003_gene3895	phage terminase, large subunit, PBSX family	NA
UHGV-0199858_43	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0199858_43	COG	COG1783	Phage terminase large subunit	NA
UHGV-0199858_43	Structural annotation	PF04466, PF20454, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0199858_44	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0199858_44	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0199858_44	UniRef90	UniRef90_A0A396NMY4	Terminase small subunit	NA
UHGV-0199858_44	eggNOG-mapper	476272.RUMHYD_01754	Terminase small subunit	NA
UHGV-0199858_44	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0199858_44	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0199858_44	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0199858_45	Structural annotation	PF10922, MF_00839	NA	NA
UHGV-0199858_46	eggNOG-mapper	742738.HMPREF9460_02503	NA	NA
UHGV-0199858_46	Structural annotation	PF06530, MF_00674, TIGR01636, COG1342	NA	NA
UHGV-0199858_47	PHROG	phrog_801	endolysin; inhibits RNA polymerase	lysis
UHGV-0199858_47	UniRef90	UniRef90_UPI000CECD208	NA	NA
UHGV-0199858_47	Pfam	PF18909	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
UHGV-0199858_47	Structural annotation	PF18909	NA	NA
UHGV-0199858_50	PHROG	phrog_1770	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0199858_50	eggNOG-mapper	536233.CLO_1822	NA	NA
UHGV-0199858_50	Structural annotation	PF02075, MF_00034, NF000711, COG0817	NA	NA
UHGV-0199858_51	UniRef90	UniRef90_A0A374AB28	Thymidylate synthase ThyX	NA
UHGV-0199858_51	eggNOG-mapper	935948.KE386495_gene2250	NA	NA
UHGV-0199858_51	Pfam	PF02511	Thymidylate synthase complementing protein	Thy1
UHGV-0199858_51	Structural annotation	PF02511, MF_01408, TIGR02170, COG1351	NA	NA
UHGV-0199858_55	PHROG	phrog_599	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UHGV-0199858_55	UniRef90	UniRef90_R6QWY1	28	NA
UHGV-0199858_55	dbAPIS	APIS033	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	NA
UHGV-0199858_56	PHROG	phrog_38832	NA	unknown function
UHGV-0199858_56	eggNOG-mapper	665956.HMPREF1032_03087	NA	NA
UHGV-0199858_57	PHROG	phrog_3136	NA	unknown function
UHGV-0199858_57	UniRef90	UniRef90_UPI001C00EDA4	ASCH domain-containing protein	NA
UHGV-0199858_57	eggNOG-mapper	479431.Namu_2706	ASCH	NA
UHGV-0199858_57	COG	COG4933	Predicted transcriptional regulator, contains an HTH and PUA-like domains	NA
UHGV-0199858_57	Structural annotation	PF08819, MF_00684, NF008917, COG4933	NA	NA
UHGV-0199858_59	KOfam	K00390	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	NA
UHGV-0199858_59	PHROG	phrog_424	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UHGV-0199858_59	UniRef90	UniRef90_UPI001D087498	phosphoadenosine phosphosulfate reductase family protein	NA
UHGV-0199858_59	eggNOG-mapper	1408437.JNJN01000032_gene2312	Phosphoadenosine phosphosulfate reductase	NA
UHGV-0199858_59	PADLOC	BrxP_00001	BrxP	BREX
UHGV-0199858_59	Pfam	PF01507	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
UHGV-0199858_59	COG	COG0175	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	NA
UHGV-0199858_59	Structural annotation	PF01507, MF_00063, NF010369, COG0175	NA	NA
UHGV-0199858_60	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0199858_60	PHROG	phrog_363	DNA methyltransferase	other
UHGV-0199858_60	UniRef90	UniRef90_UPI00082E0CBC	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0199858_60	eggNOG-mapper	742738.HMPREF9460_04053	C-5 cytosine-specific DNA methylase	NA
UHGV-0199858_60	PADLOC	MTase_II_00058	Type II methyltransferase	RM
UHGV-0199858_60	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0199858_60	NCBIFam	TIGR00675.1	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0199858_60	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0199858_60	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0199858_62	PHROG	phrog_16304	NA	unknown function
UHGV-0199858_62	UniRef90	UniRef90_A0A810PZI8	NA	NA
UHGV-0199858_62	eggNOG-mapper	498761.HM1_0053	HNH endonuclease	NA
UHGV-0199858_62	Pfam	PF19808	NA	DUF6291
UHGV-0199858_62	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0199858_62	Structural annotation	PF19808	NA	NA
UHGV-0199858_63	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0199858_63	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0199858_63	UniRef90	UniRef90_R6LLA3	Single-stranded DNA-binding protein	NA
UHGV-0199858_63	eggNOG-mapper	693746.OBV_19910	Single-strand binding protein family	NA
UHGV-0199858_63	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0199858_63	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0199858_63	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0199858_63	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0199858_63	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0199858_64	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0199858_64	UniRef90	UniRef90_UPI00130EB09C	ERF family protein	NA
UHGV-0199858_64	eggNOG-mapper	748224.HMPREF9436_03360	ERF superfamily	NA
UHGV-0199858_64	Pfam	PF04404	ERF superfamily	ERF
UHGV-0199858_64	Structural annotation	PF04404, COG4712	NA	NA
UHGV-0199858_65	PHROG	phrog_27197	NA	unknown function
UHGV-0199858_65	eggNOG-mapper	394503.Ccel_3068	regulation of DNA-templated transcription, elongation	NA
UHGV-0199858_65	COG	COG5164	Transcription elongation factor SPT5	NA
UHGV-0199858_65	Structural annotation	NF007410	NA	NA
UHGV-0199858_67	Structural annotation	PF14634	NA	NA
UHGV-0199858_70	Structural annotation	NF041247	NA	NA
UHGV-0199858_73	UniRef90	UniRef90_A0A810QCI5	HTH cro/C1-type domain-containing protein	NA
UHGV-0199858_73	eggNOG-mapper	240292.Ava_C0229	Helix-turn-helix domain	NA
UHGV-0199858_73	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0199858_73	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0199858_73	Structural annotation	PF01381, NF041951, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0199858	Yes	40,309 bps	53.54%	100.00%	0.9826
UHGV-1525976	No	41,003 bps	53.44%	99.90%	0.9815
UHGV-0174897	No	40,485 bps	53.61%	99.90%	0.9816
UHGV-1488645	No	39,326 bps	53.54%	96.30%	0.9827
UHGV-1451889	No	37,008 bps	53.43%	89.34%	0.9825
UHGV-1419379	No	21,118 bps	52.81%	50.29%	0.9822
UHGV-0357484	No	20,880 bps	53.44%	49.63%	0.9797
UHGV-1742523	No	14,854 bps	53.05%	36.63%	0.9805
UHGV-0065089	No	14,168 bps	52.53%	35.39%	0.9812
UHGV-1698498	No	14,497 bps	54.06%	34.46%	0.9834
UHGV-0242258	No	10,442 bps	52.37%	25.03%	0.9832