vOTU-047520

Overview

vOTU representative UHGV-0201422

No. of genomes 4

Genome length 38,007 bps

Completeness 100.00% (complete)

Host Streptococcus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047520
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-00223 › vGENUS-00276 › vSUBGEN-03373 › vOTU-047520
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Streptococcaceae › Streptococcus
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201422
BioSample	SAMN05827227
Genome length	38,007 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	49
CDS density	90.20%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201422_1	Structural annotation	PF09202, COG1321	NA	NA
UHGV-0201422_3	UniRef90	UniRef90_A0A1F1H878	Repressor	NA
UHGV-0201422_3	eggNOG-mapper	646413.C5IUM3_9CAUD	NA	NA
UHGV-0201422_3	Pfam	PF05339	NA	DUF739
UHGV-0201422_3	Structural annotation	PF05339, NF002773, COG1476	NA	NA
UHGV-0201422_4	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0201422_4	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0201422_4	UniRef90	UniRef90_A0A448A8C2	Prophage LambdaSa03, transcriptional regulator,Cro/CI family	NA
UHGV-0201422_4	eggNOG-mapper	85154.O34035_BPO12	sequence-specific DNA binding	NA
UHGV-0201422_4	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201422_4	Structural annotation	PF12844, MF_00535, NF041951, COG3655	NA	NA
UHGV-0201422_5	PHROG	phrog_87	metallo-protease	other
UHGV-0201422_5	UniRef90	UniRef90_A0A1V0H7S9	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0201422_5	eggNOG-mapper	1095737.HMPREF1110_1192	Zn peptidase	NA
UHGV-0201422_5	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0201422_5	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0201422_5	Structural annotation	PF06114, COG2856	NA	NA
UHGV-0201422_6	PHROG	phrog_28808	NA	unknown function
UHGV-0201422_7	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0201422_7	PHROG	phrog_95	integrase	integration and excision
UHGV-0201422_7	UniRef90	UniRef90_A0A564TSP0	DNA-invertase hin	NA
UHGV-0201422_7	eggNOG-mapper	1123309.AQYB01000022_gene10	COG1961 Site-specific recombinases, DNA invertase Pin homologs	NA
UHGV-0201422_7	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0201422_7	Pfam	PF07508	Recombinase	Recombinase
UHGV-0201422_7	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0201422_7	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0201422_7	Structural annotation	PF00239, PF07508, NF041201, COG1961	NA	NA
UHGV-0201422_8	Structural annotation	PF12205	NA	NA
UHGV-0201422_9	PHROG	phrog_4964	NA	unknown function
UHGV-0201422_9	UniRef90	UniRef90_A0A1F2H8S5	Elongation factor G	NA
UHGV-0201422_11	UniRef90	UniRef90_A0A564TQW9	N-terminal Ras-GEF domain-containing protein	NA
UHGV-0201422_12	KOfam	K07273	acm; lysozyme	NA
UHGV-0201422_12	PHROG	phrog_8577	endolysin	lysis
UHGV-0201422_12	UniRef90	UniRef90_UPI00116A55BA	CHAP domain-containing protein	NA
UHGV-0201422_12	eggNOG-mapper	372457.A7DYC5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0201422_12	Pfam	PF05257	CHAP domain	CHAP
UHGV-0201422_12	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0201422_12	Structural annotation	PF01183, PF05257, COG3942	NA	NA
UHGV-0201422_13	PHROG	phrog_962	holin	lysis
UHGV-0201422_13	UniRef90	UniRef90_A0A1V0H822	Phage holin	NA
UHGV-0201422_13	eggNOG-mapper	888049.HMPREF8578_0250	COG5546 Small integral membrane protein	NA
UHGV-0201422_13	Pfam	PF04531	Bacteriophage holin	Phage_holin_1
UHGV-0201422_13	NCBIFam	TIGR01598.1	phage holin	NA
UHGV-0201422_13	COG	COG5546	NA	NA
UHGV-0201422_13	Structural annotation	COG5546	NA	NA
UHGV-0201422_14	PHROG	phrog_199	holin	lysis
UHGV-0201422_14	UniRef90	UniRef90_UPI00116E5E73	phage holin family protein	NA
UHGV-0201422_14	eggNOG-mapper	1051631.F8HGP0_9CAUD	Pfam:Phage_holin_4_1	NA
UHGV-0201422_14	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0201422_14	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0201422_14	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0201422_15	PHROG	phrog_17240	NA	unknown function
UHGV-0201422_15	UniRef90	UniRef90_A0A8B1YVU1	SGNH/GDSL hydrolase family protein	NA
UHGV-0201422_15	eggNOG-mapper	1349822.NSB1T_12060	NA	NA
UHGV-0201422_15	Structural annotation	PF16255, PF07100, NF007403	NA	NA
UHGV-0201422_16	PHROG	phrog_3558	tail protein	tail
UHGV-0201422_16	UniRef90	UniRef90_A0A564TQX2	GBS Bsp-like repeat protein	NA
UHGV-0201422_16	eggNOG-mapper	646413.C5IUK5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0201422_16	Pfam	PF08481	GBS Bsp-like repeat	GBS_Bsp-like
UHGV-0201422_16	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0201422_16	Structural annotation	PF14594, PF08481, TIGR01665, COG4926, COG3330	NA	NA
UHGV-0201422_17	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0201422_17	UniRef90	UniRef90_A0A564TR06	Phage tail protein	NA
UHGV-0201422_17	eggNOG-mapper	646413.C5IUK4_9CAUD	NA	NA
UHGV-0201422_17	Structural annotation	PF20195, PF21621, TIGR01633, COG4722	NA	NA
UHGV-0201422_18	PHROG	phrog_1204	tail protein	tail
UHGV-0201422_18	UniRef90	UniRef90_UPI0011691D31	tape measure protein	NA
UHGV-0201422_18	eggNOG-mapper	646413.C5IUK3_9CAUD	transmembrane transport	NA
UHGV-0201422_18	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0201422_18	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0201422_19	PHROG	phrog_706	NA	unknown function
UHGV-0201422_19	UniRef90	UniRef90_UPI001172F873	Gp15 family bacteriophage protein	NA
UHGV-0201422_19	eggNOG-mapper	646413.C5IUK2_9CAUD	Bacteriophage Gp15 protein	NA
UHGV-0201422_19	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0201422_19	Structural annotation	PF06854	NA	NA
UHGV-0201422_20	PHROG	phrog_1061	NA	unknown function
UHGV-0201422_20	UniRef90	UniRef90_A0A139RN56	NA	NA
UHGV-0201422_20	eggNOG-mapper	1035189.HMPREF9954_0315	NA	NA
UHGV-0201422_20	Structural annotation	PF10666	NA	NA
UHGV-0201422_21	PHROG	phrog_820	major tail protein	tail
UHGV-0201422_21	UniRef90	UniRef90_UPI001168AA73	phage tail protein	NA
UHGV-0201422_21	eggNOG-mapper	646413.C5IUK0_9CAUD	NA	NA
UHGV-0201422_21	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0201422_22	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0201422_22	UniRef90	UniRef90_A0A2C5WHK7	Capsid protein	NA
UHGV-0201422_22	eggNOG-mapper	646413.C5IUJ9_9CAUD	Minor capsid protein from bacteriophage	NA
UHGV-0201422_22	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0201422_22	Structural annotation	PF12691	NA	NA
UHGV-0201422_23	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0201422_23	UniRef90	UniRef90_A0A3S4NDX7	Putative minor capsid protein	NA
UHGV-0201422_23	eggNOG-mapper	646413.C5IUJ8_9CAUD	Minor capsid protein	NA
UHGV-0201422_23	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0201422_23	Structural annotation	PF11114, TIGR01725	NA	NA
UHGV-0201422_24	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0201422_24	UniRef90	UniRef90_UPI0011679C43	putative minor capsid protein	NA
UHGV-0201422_24	eggNOG-mapper	537874.B3GW07_9CAUD	Minor capsid protein	NA
UHGV-0201422_24	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0201422_24	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0201422_25	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0201422_25	UniRef90	UniRef90_A0A3S4LW47	NA	NA
UHGV-0201422_25	eggNOG-mapper	646413.C5IUJ7_9CAUD	NA	NA
UHGV-0201422_26	UniRef90	UniRef90_UPI001167ED7C	Rho termination factor N-terminal domain-containing protein	NA
UHGV-0201422_26	Pfam	PF07498	Rho termination factor, N-terminal domain	Rho_N
UHGV-0201422_26	COG	COG0052	Ribosomal protein S2	NA
UHGV-0201422_26	Structural annotation	PF07498	NA	NA
UHGV-0201422_27	PHROG	phrog_544	major head protein	head and packaging
UHGV-0201422_27	UniRef90	UniRef90_C5IUJ5	Major head protein	NA
UHGV-0201422_27	eggNOG-mapper	646413.C5IUJ5_9CAUD	peptidase activity	NA
UHGV-0201422_27	NCBIFam	TIGR04387.1	N4-gp56 family major capsid protein	NA
UHGV-0201422_27	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0201422_28	PHROG	phrog_194	head scaffolding protein	head and packaging
UHGV-0201422_28	UniRef90	UniRef90_A0A3S4MNS5	Putative scaffolding protein	NA
UHGV-0201422_28	eggNOG-mapper	646413.C5IUJ4_9CAUD	Phage minor structural protein GP20	NA
UHGV-0201422_28	Pfam	PF06810	Phage minor structural protein GP20	Phage_GP20
UHGV-0201422_29	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0201422_29	UniRef90	UniRef90_A0A448A8S9	Phage minor capsid 2 family protein	NA
UHGV-0201422_29	eggNOG-mapper	646413.C5IUJ3_9CAUD	Phage minor capsid protein 2	NA
UHGV-0201422_29	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0201422_29	Structural annotation	PF06152	NA	NA
UHGV-0201422_30	PHROG	phrog_533	portal protein	head and packaging
UHGV-0201422_30	UniRef90	UniRef90_UPI0011703CB6	phage portal protein	NA
UHGV-0201422_30	eggNOG-mapper	646413.C5IUJ2_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0201422_30	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0201422_30	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0201422_30	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0201422_31	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0201422_31	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0201422_31	UniRef90	UniRef90_A0A2C5WCW2	PBSX family phage terminase large subunit	NA
UHGV-0201422_31	eggNOG-mapper	646413.C5IUJ1_9CAUD	Pfam:Terminase_3C	NA
UHGV-0201422_31	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0201422_31	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0201422_31	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0201422_31	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0201422_32	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0201422_32	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0201422_32	UniRef90	UniRef90_A0A2C5WJ26	Terminase	NA
UHGV-0201422_32	eggNOG-mapper	1054460.SPPN_00130	DNA packaging	NA
UHGV-0201422_32	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0201422_32	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0201422_32	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0201422_33	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-0201422_33	UniRef90	UniRef90_A0A191KC45	ArpU late transcriptional regulator	NA
UHGV-0201422_33	eggNOG-mapper	1403946.Q615_SPAC00127G0144	Transcriptional regulator, ArpU family	NA
UHGV-0201422_33	NCBIFam	TIGR01637.1	ArpU family phage packaging/lysis transcriptional regulator	NA
UHGV-0201422_33	Structural annotation	PF05263, MF_00674, TIGR01637, COG1191	NA	NA
UHGV-0201422_34	PHROG	phrog_1814	NA	unknown function
UHGV-0201422_34	UniRef90	UniRef90_UPI001166BC6E	NA	NA
UHGV-0201422_34	Pfam	PF07067	NA	DUF1340
UHGV-0201422_34	Structural annotation	PF07067	NA	NA
UHGV-0201422_35	PHROG	phrog_24146	NA	unknown function
UHGV-0201422_36	PHROG	phrog_884	NA	unknown function
UHGV-0201422_36	UniRef90	UniRef90_UPI00116C6D8E	NA	NA
UHGV-0201422_36	eggNOG-mapper	365659.smi_0433	NA	NA
UHGV-0201422_36	Pfam	PF07116	NA	DUF1372
UHGV-0201422_36	Structural annotation	PF07116	NA	NA
UHGV-0201422_37	PHROG	phrog_1994	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201422_37	UniRef90	UniRef90_UPI001F4FE61A	MazG-like family protein	NA
UHGV-0201422_37	eggNOG-mapper	1385385.U6E975_9CAUD	sequence-specific DNA binding	NA
UHGV-0201422_37	Structural annotation	PF01503, MF_01019, NF001610, COG0140	NA	NA
UHGV-0201422_38	PHROG	phrog_5513	NA	unknown function
UHGV-0201422_38	UniRef90	UniRef90_A0A081R6N1	NA	NA
UHGV-0201422_39	PHROG	phrog_121	NA	unknown function
UHGV-0201422_39	UniRef90	UniRef90_A0A1V0HAD4	NA	NA
UHGV-0201422_39	eggNOG-mapper	1095737.HMPREF1110_1213	NA	NA
UHGV-0201422_39	Pfam	PF07852	NA	DUF1642
UHGV-0201422_39	Structural annotation	PF07852	NA	NA
UHGV-0201422_40	PHROG	phrog_1489	NA	unknown function
UHGV-0201422_40	UniRef90	UniRef90_Q9MCL8	ORF12	NA
UHGV-0201422_40	Structural annotation	PF13773	NA	NA
UHGV-0201422_41	PHROG	phrog_1982	NA	unknown function
UHGV-0201422_41	UniRef90	UniRef90_Q9MCL9	ORF11	NA
UHGV-0201422_41	Structural annotation	PF01381, NF040507, COG2944	NA	NA
UHGV-0201422_42	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0201422_42	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0201422_42	UniRef90	UniRef90_UPI0015D19E48	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0201422_42	eggNOG-mapper	112023.Q9MCM0_9CAUD	magnesium ion binding	NA
UHGV-0201422_42	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0201422_42	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0201422_43	PHROG	phrog_2882	DNA methyltransferase	other
UHGV-0201422_43	UniRef90	UniRef90_A0A7G1JQI7	DNA methyltransferase	NA
UHGV-0201422_43	eggNOG-mapper	1297534.CAUJ01000005_gene198	DNA (cytosine-5-)-methyltransferase activity	NA
UHGV-0201422_43	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0201422_43	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0201422_43	Structural annotation	PF00145, TIGR00675, COG0270	NA	NA
UHGV-0201422_44	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0201422_44	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201422_44	UniRef90	UniRef90_A0A6A8UB55	Single-stranded DNA-binding protein	NA
UHGV-0201422_44	eggNOG-mapper	264199.stu1753	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0201422_44	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0201422_44	NCBIFam	NF005580.0	single-stranded DNA-binding protein	NA
UHGV-0201422_44	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0201422_44	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0201422_44	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0201422_45	PHROG	phrog_674	NA	unknown function
UHGV-0201422_45	UniRef90	UniRef90_UPI00116D7F12	NA	NA
UHGV-0201422_45	eggNOG-mapper	1239381.K4JU67_9CAUD	NA	NA
UHGV-0201422_45	Pfam	PF07083	NA	DUF1351
UHGV-0201422_45	Structural annotation	PF07083	NA	NA
UHGV-0201422_46	PHROG	phrog_25348	NA	unknown function
UHGV-0201422_46	UniRef90	UniRef90_UPI0015D2A9A2	ERF family protein	NA
UHGV-0201422_46	eggNOG-mapper	1277892.M1IEW6_9CAUD	ERF superfamily	NA
UHGV-0201422_46	Pfam	PF04404	ERF superfamily	ERF
UHGV-0201422_46	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0201422_47	PHROG	phrog_2553	NA	unknown function
UHGV-0201422_47	UniRef90	UniRef90_UPI00118251C3	2-hydroxyacyl-CoA dehydratase	NA
UHGV-0201422_48	UniRef90	UniRef90_UPI0018ABF546	Ig-like domain-containing protein	NA
UHGV-0201422_48	eggNOG-mapper	435842.HMPREF0848_00198	Pilin isopeptide linkage domain protein	NA
UHGV-0201422_48	Pfam	PF17961	Bacterial Ig domain	Big_8
UHGV-0201422_48	Pfam	PF05737	Collagen binding domain	Collagen_bind
UHGV-0201422_48	COG	COG4932	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	NA
UHGV-0201422_48	Structural annotation	PF05737, PF17961, NF000535	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201422	Yes	38,007 bps	41.96%	100.00%	0.9819
UHGV-1517434	No	38,204 bps	41.93%	99.90%	0.9817
UHGV-0148220	No	38,018 bps	41.95%	99.67%	0.9815
UHGV-1398879	No	38,018 bps	41.95%	99.67%	0.9815