vOTU-047534

Overview

vOTU representative UHGV-0201799

No. of genomes 6

Genome length 44,071 bps

Completeness 100.00% (complete)

Host HGM13006

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047534
Number of genomes	6
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 › vSUBFAM-00991 › vGENUS-01292 › vSUBGEN-20530 › vOTU-047534
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › HGM13006
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201799
BioSample	NA
Genome length	44,071 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	75
CDS density	90.18%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201799_1	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201799_1	UniRef90	UniRef90_R4JX48	HNHc domain-containing protein	NA
UHGV-0201799_1	eggNOG-mapper	1405.DJ92_863	HNH endonuclease	NA
UHGV-0201799_1	Pfam	PF01844	HNH endonuclease	HNH
UHGV-0201799_1	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0201799_3	PHROG	phrog_2059	anti-restriction protein	moron, auxiliary metabolic gene and host takeover
UHGV-0201799_3	UniRef90	UniRef90_A0A1C5W2Q0	Antirestriction protein	NA
UHGV-0201799_3	eggNOG-mapper	1121334.KB911068_gene2318	Antirestriction protein (ArdA)	NA
UHGV-0201799_3	Pfam	PF07275	Antirestriction protein (ArdA)	ArdA
UHGV-0201799_3	dbAPIS	APIS003	DNA mimetics, i.e. structurally and electrostatically imitate the B-form of DNA and thus function as competitive inhibitors of restriction enzymes.	NA
UHGV-0201799_3	COG	COG4734	Antirestriction protein ArdA	NA
UHGV-0201799_3	Structural annotation	PF07275, COG4734	NA	NA
UHGV-0201799_6	Structural annotation	PF08681	NA	NA
UHGV-0201799_11	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0201799_11	UniRef90	UniRef90_I2E8X7	Gp31	NA
UHGV-0201799_11	eggNOG-mapper	1519439.JPJG01000060_gene1883	NA	NA
UHGV-0201799_11	Structural annotation	PF21578, NF033538	NA	NA
UHGV-0201799_12	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0201799_12	UniRef90	UniRef90_A0A845R8D4	NA	NA
UHGV-0201799_12	eggNOG-mapper	693746.OBV_25250	NA	NA
UHGV-0201799_12	Pfam	PF06356	NA	DUF1064
UHGV-0201799_12	Structural annotation	PF06356, NF033179	NA	NA
UHGV-0201799_14	PHROG	phrog_24518	NA	unknown function
UHGV-0201799_14	eggNOG-mapper	1519439.JPJG01000077_gene922	NA	NA
UHGV-0201799_19	Pfam	PF00627	UBA/TS-N domain	UBA
UHGV-0201799_21	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0201799_21	PHROG	phrog_23224	DNA methyltransferase	other
UHGV-0201799_21	UniRef90	UniRef90_UPI001E30CE28	site-specific DNA-methyltransferase	NA
UHGV-0201799_21	eggNOG-mapper	1268240.ATFI01000007_gene431	DNA methylase	NA
UHGV-0201799_21	PADLOC	MTase_II_00172	Type II methyltransferase	RM
UHGV-0201799_21	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0201799_21	COG	COG0863	DNA modification methylase	NA
UHGV-0201799_21	Structural annotation	PF01555, MF_01872, NF008572, COG0863	NA	NA
UHGV-0201799_22	Structural annotation	NF037951	NA	NA
UHGV-0201799_23	eggNOG-mapper	1235802.C823_05483	NA	NA
UHGV-0201799_25	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0201799_25	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201799_25	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0201799_25	Structural annotation	PF01381, MF_00535, NF041951, COG1396	NA	NA
UHGV-0201799_29	UniRef90	UniRef90_A0A098GES5	Putative phage associated protein	NA
UHGV-0201799_29	Structural annotation	PF01423, MF_00257, NF001963, COG1958	NA	NA
UHGV-0201799_33	PHROG	phrog_478	site-specific recombination directionality factor RDF	integration and excision
UHGV-0201799_33	UniRef90	UniRef90_R6R5K5	Protein 64 protein	NA
UHGV-0201799_33	eggNOG-mapper	1111121.HMPREF1247_0834	NA	NA
UHGV-0201799_36	Structural annotation	PF09202, MF_01177, TIGR02702, COG1846	NA	NA
UHGV-0201799_37	Structural annotation	PF13463, MF_01909, NF033788, COG1846	NA	NA
UHGV-0201799_40	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0201799_40	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0201799_40	UniRef90	UniRef90_A0A1I0WH34	Helix-turn-helix domain-containing protein	NA
UHGV-0201799_40	eggNOG-mapper	1235797.C816_03553	DNA-binding helix-turn-helix protein	NA
UHGV-0201799_40	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0201799_40	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0201799_40	Structural annotation	PF01381, MF_00535, NF007257, COG1396	NA	NA
UHGV-0201799_41	PHROG	phrog_15667	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0201799_41	eggNOG-mapper	33035.JPJF01000109_gene437	Host cell surface-exposed lipoprotein	NA
UHGV-0201799_41	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0201799_41	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0201799_41	Structural annotation	PF02631, MF_01114, NF001056, COG2137	NA	NA
UHGV-0201799_43	Structural annotation	PF13560, TIGR03070, COG3655	NA	NA
UHGV-0201799_44	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0201799_44	PHROG	phrog_95	integrase	integration and excision
UHGV-0201799_44	UniRef90	UniRef90_A0A3A6JR24	Recombinase family protein	NA
UHGV-0201799_44	eggNOG-mapper	665956.HMPREF1032_03589	NA	NA
UHGV-0201799_44	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0201799_44	Pfam	PF07508	Recombinase	Recombinase
UHGV-0201799_44	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0201799_44	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0201799_44	Structural annotation	PF00239, PF07508, PF15188, NF041201, COG1961	NA	NA
UHGV-0201799_45	eggNOG-mapper	1408437.JNJN01000043_gene801	NA	NA
UHGV-0201799_46	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0201799_47	PHROG	phrog_16490	NA	unknown function
UHGV-0201799_48	PHROG	phrog_59	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0201799_48	UniRef90	UniRef90_A0A357JCP2	HNHc domain-containing protein	NA
UHGV-0201799_48	eggNOG-mapper	324831.LGAS_0604	NUMOD1 domain	NA
UHGV-0201799_48	PADLOC	HEase_00016	homing endonuclease	RM
UHGV-0201799_48	Pfam	PF07463	NUMOD4 motif	NUMOD4
UHGV-0201799_48	Pfam	PF13392	HNH endonuclease	HNH_3
UHGV-0201799_48	Pfam	PF07453	NUMOD1 domain	NUMOD1
UHGV-0201799_48	Structural annotation	PF07463, PF07453, TIGR01453	NA	NA
UHGV-0201799_52	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-0201799_52	PHROG	phrog_2104	NA	unknown function
UHGV-0201799_52	eggNOG-mapper	1410631.JHWZ01000002_gene1263	sequence-specific DNA binding	NA
UHGV-0201799_52	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201799_52	COG	COG2944	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	NA
UHGV-0201799_52	Structural annotation	PF01381, TIGR03070, COG1476	NA	NA
UHGV-0201799_54	Structural annotation	PF13404, TIGR01636	NA	NA
UHGV-0201799_55	KOfam	K07273	acm; lysozyme	NA
UHGV-0201799_55	PHROG	phrog_291	endolysin	lysis
UHGV-0201799_55	UniRef90	UniRef90_A0A6S6X8V6	Putative Lysozyme	NA
UHGV-0201799_55	eggNOG-mapper	1304880.JAGB01000002_gene2202	Glycosyl hydrolase, family 25	NA
UHGV-0201799_55	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0201799_55	COG	COG1388	LysM repeat	NA
UHGV-0201799_55	Structural annotation	PF01183, PF19127, TIGR04035, TIGR04303, COG3757	NA	NA
UHGV-0201799_56	PHROG	phrog_443	holin	lysis
UHGV-0201799_56	UniRef90	UniRef90_UPI000C852E5F	holin	NA
UHGV-0201799_56	eggNOG-mapper	397288.C806_00114	Putative lactococcus lactis phage r1t holin	NA
UHGV-0201799_56	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0201799_56	Structural annotation	PF16945	NA	NA
UHGV-0201799_57	PHROG	phrog_1863	NA	unknown function
UHGV-0201799_57	eggNOG-mapper	665956.HMPREF1032_03922	NA	NA
UHGV-0201799_60	Structural annotation	PF05382, COG3738	NA	NA
UHGV-0201799_61	PHROG	phrog_3558	tail protein	tail
UHGV-0201799_61	UniRef90	UniRef90_UPI001373F113	phage tail protein	NA
UHGV-0201799_61	eggNOG-mapper	552396.HMPREF0863_01446	Phage minor structural protein	NA
UHGV-0201799_61	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0201799_61	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0201799_61	COG	COG4926	Phage-related protein	NA
UHGV-0201799_62	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0201799_62	eggNOG-mapper	877414.ATWA01000019_gene2049	NA	NA
UHGV-0201799_62	Structural annotation	PF05709, PF21621, TIGR01633, COG4722	NA	NA
UHGV-0201799_63	KOfam	K16808	NUMA1; nuclear mitotic apparatus protein 1	NA
UHGV-0201799_63	PHROG	phrog_1533	tail length tape measure protein	tail
UHGV-0201799_63	UniRef90	UniRef90_A0A7X5IQS8	Phage tail tape measure protein	NA
UHGV-0201799_63	eggNOG-mapper	445972.ANACOL_00191	Phage-related minor tail protein	NA
UHGV-0201799_63	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0201799_63	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0201799_63	COG	COG5283	Phage-related tail protein	NA
UHGV-0201799_63	Structural annotation	PF10145, TIGR01760, COG5280	NA	NA
UHGV-0201799_66	PHROG	phrog_88	major tail protein	tail
UHGV-0201799_66	UniRef90	UniRef90_UPI001C027993	major tail protein	NA
UHGV-0201799_66	NCBIFam	TIGR01603.1	major tail protein	NA
UHGV-0201799_66	Structural annotation	PF04630, TIGR01603, COG3498	NA	NA
UHGV-0201799_67	Structural annotation	TIGR01725	NA	NA
UHGV-0201799_68	Structural annotation	PF05657, COG5003	NA	NA
UHGV-0201799_69	PHROG	phrog_19734	NA	unknown function
UHGV-0201799_69	eggNOG-mapper	349161.Dred_2602	NA	NA
UHGV-0201799_69	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0201799_70	PHROG	phrog_749	NA	unknown function
UHGV-0201799_70	UniRef90	UniRef90_A0A4Z0H451	Phage gp6-like head-tail connector protein	NA
UHGV-0201799_70	eggNOG-mapper	86416.Clopa_0342	NA	NA
UHGV-0201799_71	PHROG	phrog_10	major head protein	head and packaging
UHGV-0201799_71	UniRef90	UniRef90_UPI001EE92F83	phage major capsid protein	NA
UHGV-0201799_71	eggNOG-mapper	610130.Closa_0744	Phage capsid family	NA
UHGV-0201799_71	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0201799_71	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0201799_71	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0201799_71	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0201799_72	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0201799_72	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0201799_72	UniRef90	UniRef90_UPI00156EEE56	Clp protease ClpP	NA
UHGV-0201799_72	eggNOG-mapper	553184.ATORI0001_1180	Clp protease	NA
UHGV-0201799_72	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0201799_72	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0201799_72	Structural annotation	PF00574, MF_00444, NF009203, COG0740	NA	NA
UHGV-0201799_73	PHROG	phrog_12	portal protein	head and packaging
UHGV-0201799_73	UniRef90	UniRef90_UPI00073F4FD3	phage portal protein	NA
UHGV-0201799_73	eggNOG-mapper	1220589.CD32_00790	portal protein	NA
UHGV-0201799_73	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0201799_73	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0201799_73	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0201799_74	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0201799_74	UniRef90	UniRef90_A0A1T4YES7	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0201799_74	eggNOG-mapper	86416.Clopa_0337	Phage Terminase	NA
UHGV-0201799_74	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0201799_74	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0201799_74	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0201799_74	Structural annotation	PF20441, PF03354, MF_04146, TIGR01547, COG4626	NA	NA
UHGV-0201799_75	PHROG	phrog_5110	terminase small subunit	head and packaging
UHGV-0201799_75	UniRef90	UniRef90_A0A1G4FJQ3	Putative phage terminase, small subunit, P27 family	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201799	Yes	44,071 bps	53.27%	100.00%	0.9811
UHGV-0180246	No	44,064 bps	53.27%	99.90%	0.9811
UHGV-0187069	No	43,502 bps	53.14%	99.90%	0.9805
UHGV-0174894	No	43,086 bps	53.23%	99.90%	0.9813
UHGV-0179775	No	40,676 bps	53.34%	99.90%	0.9814
UHGV-0175058	No	29,323 bps	53.34%	72.69%	0.9819