vOTU-047536

Overview

vOTU representative UHGV-0201862

No. of genomes 4

Genome length 44,684 bps

Completeness 100.00% (complete)

Host Acidaminococcus massiliensis

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047536
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00008 › vSUBFAM-02102 › vGENUS-13021 › vSUBGEN-20529 › vOTU-047536
Host taxonomy	Bacteria › Firmicutes C › Negativicutes › Acidaminococcales › Acidaminococcaceae › Acidaminococcus › Acidaminococcus massiliensis
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0201862
BioSample	NA
Genome length	44,684 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	63
CDS density	93.85%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0201862_1	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0201862_1	PHROG	phrog_4	transcriptional repressor	transcription regulation
UHGV-0201862_1	UniRef90	UniRef90_A0A316LS97	LexA family transcriptional regulator	NA
UHGV-0201862_1	eggNOG-mapper	1111454.HMPREF1250_0095	Peptidase S24-like	NA
UHGV-0201862_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0201862_1	Pfam	PF00717	Peptidase S24-like	Peptidase_S24
UHGV-0201862_1	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0201862_1	Structural annotation	PF01381, PF00717, MF_00015, NF041951, COG1396	NA	NA
UHGV-0201862_2	Structural annotation	PF16747	NA	NA
UHGV-0201862_3	UniRef90	UniRef90_A0A2S0M9F3	Ada_Zn_binding domain-containing protein	NA
UHGV-0201862_3	eggNOG-mapper	1120985.AUMI01000019_gene2262	sequence-specific DNA binding	NA
UHGV-0201862_3	Pfam	PF02805	Metal binding domain of Ada	Ada_Zn_binding
UHGV-0201862_3	COG	COG2169	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	NA
UHGV-0201862_3	Structural annotation	PF02805	NA	NA
UHGV-0201862_4	PHROG	phrog_29674	NA	unknown function
UHGV-0201862_4	UniRef90	UniRef90_A0A2Z4JMG7	PBCV_basic_adap domain-containing protein	NA
UHGV-0201862_4	eggNOG-mapper	404380.Gbem_1748	NA	NA
UHGV-0201862_6	KOfam	K14059	int; integrase	NA
UHGV-0201862_6	PHROG	phrog_1	integrase	integration and excision
UHGV-0201862_6	UniRef90	UniRef90_UPI00094E87E6	site-specific integrase	NA
UHGV-0201862_6	eggNOG-mapper	1273103.NM10_06906	Belongs to the 'phage' integrase family	NA
UHGV-0201862_6	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0201862_6	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0201862_6	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0201862_6	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0201862_6	Structural annotation	PF00589, PF14659, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0201862_7	PHROG	phrog_2143	NA	unknown function
UHGV-0201862_7	eggNOG-mapper	329381.D9ICD9_9CAUD	NA	NA
UHGV-0201862_8	PHROG	phrog_863	tail fiber assembly	tail
UHGV-0201862_8	COG	COG1361	S-layer protein MJ0795, predicted component of type IV pili-like system	NA
UHGV-0201862_9	KOfam	K08131	COL9A; collagen type IX alpha	NA
UHGV-0201862_9	PHROG	phrog_25979	NA	unknown function
UHGV-0201862_9	eggNOG-mapper	1232428.CAVO010000021_gene791	cellulose 1,4-beta-cellobiosidase activity	NA
UHGV-0201862_9	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0201862_9	COG	COG5301	Phage-related tail fiber protein	NA
UHGV-0201862_10	eggNOG-mapper	568816.Acin_1823	NA	NA
UHGV-0201862_12	PHROG	phrog_5867	endolysin	lysis
UHGV-0201862_12	UniRef90	UniRef90_UPI001B7FBF6A	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0201862_12	eggNOG-mapper	1200557.JHWV01000001_gene260	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0201862_12	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0201862_12	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0201862_12	Structural annotation	MF_04111	NA	NA
UHGV-0201862_13	eggNOG-mapper	568816.Acin_1216	NA	NA
UHGV-0201862_14	PHROG	phrog_4105	NA	unknown function
UHGV-0201862_15	PHROG	phrog_9880	NA	unknown function
UHGV-0201862_15	UniRef90	UniRef90_A0A239Z8B8	LPD3 domain-containing protein	NA
UHGV-0201862_15	eggNOG-mapper	568816.Acin_1824	NA	NA
UHGV-0201862_15	Pfam	PF18819	Phage MuF-C-terminal domain	MuF_C
UHGV-0201862_16	eggNOG-mapper	568816.Acin_1825	NA	NA
UHGV-0201862_16	Structural annotation	NF008096	NA	NA
UHGV-0201862_17	PHROG	phrog_418	internal virion protein	head and packaging
UHGV-0201862_17	eggNOG-mapper	568816.Acin_1826	NA	NA
UHGV-0201862_17	Structural annotation	TIGR02971	NA	NA
UHGV-0201862_18	PHROG	phrog_308	internal virion protein	head and packaging
UHGV-0201862_18	eggNOG-mapper	202954.BBNK01000010_gene1461	NA	NA
UHGV-0201862_18	Structural annotation	PF13420, MF_02210, NF011709, COG1247	NA	NA
UHGV-0201862_19	PHROG	phrog_376	tail protein	tail
UHGV-0201862_19	UniRef90	UniRef90_A0A0U1KV93	NA	NA
UHGV-0201862_19	eggNOG-mapper	568816.Acin_1828	NA	NA
UHGV-0201862_19	Structural annotation	PF11134, MF_00923, TIGR03300, COG2706	NA	NA
UHGV-0201862_20	PHROG	phrog_394	tail protein	tail
UHGV-0201862_20	UniRef90	UniRef90_Q775D0	Bbp14	NA
UHGV-0201862_20	eggNOG-mapper	568816.Acin_1829	NA	NA
UHGV-0201862_20	Structural annotation	PF17212	NA	NA
UHGV-0201862_21	Structural annotation	PF21190, NF033675	NA	NA
UHGV-0201862_22	PHROG	phrog_212	major head protein	head and packaging
UHGV-0201862_22	eggNOG-mapper	568816.Acin_1831	NA	NA
UHGV-0201862_22	Pfam	PF20911	Major capsid protein GP7	GP7
UHGV-0201862_22	Structural annotation	PF20911, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0201862_23	PHROG	phrog_458	protease	other
UHGV-0201862_23	UniRef90	UniRef90_A0A6J5NV41	Putative protease	NA
UHGV-0201862_23	eggNOG-mapper	568816.Acin_1832	NA	NA
UHGV-0201862_24	PHROG	phrog_528	NA	unknown function
UHGV-0201862_24	UniRef90	UniRef90_A0A4S4AWB3	Endopeptidase	NA
UHGV-0201862_24	eggNOG-mapper	568816.Acin_1833	NA	NA
UHGV-0201862_25	PHROG	phrog_332	head-tail adaptor	connector
UHGV-0201862_25	UniRef90	UniRef90_UPI001D01A9F3	portal protein	NA
UHGV-0201862_25	eggNOG-mapper	568816.Acin_1834	Bacteriophage head to tail connecting protein	NA
UHGV-0201862_25	Pfam	PF12236	Bacteriophage head to tail connecting protein	Head-tail_con
UHGV-0201862_25	Structural annotation	PF12236, MF_04120, TIGR01538, COG4695	NA	NA
UHGV-0201862_27	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0201862_27	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0201862_27	UniRef90	UniRef90_UPI001D00EC11	terminase family protein	NA
UHGV-0201862_27	eggNOG-mapper	568816.Acin_1836	Terminase RNaseH-like domain	NA
UHGV-0201862_27	COG	COG0507	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0201862_27	Structural annotation	PF03237, PF17289, MF_04146, TIGR01547, COG4373	NA	NA
UHGV-0201862_30	eggNOG-mapper	246194.CHY_1683	phage transcriptional regulator, RinA family	NA
UHGV-0201862_31	Pfam	PF00166	Chaperonin 10 Kd subunit	Cpn10
UHGV-0201862_34	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0201862_34	UniRef90	UniRef90_A0A6N7W1M2	RusA family crossover junction endodeoxyribonuclease	NA
UHGV-0201862_34	eggNOG-mapper	1273103.NM10_01114	Endodeoxyribonuclease RusA	NA
UHGV-0201862_34	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0201862_36	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0201862_36	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0201862_36	UniRef90	UniRef90_R6WK64	Single-stranded DNA-binding protein	NA
UHGV-0201862_36	eggNOG-mapper	591001.Acfer_0039	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0201862_36	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0201862_36	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0201862_36	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0201862_36	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0201862_36	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0201862_37	PHROG	phrog_2245	nucleoside triphosphate pyrophosphohydrolase	other
UHGV-0201862_37	UniRef90	UniRef90_A0A1I0VIB3	MazG nucleotide pyrophosphohydrolase domain-containing protein	NA
UHGV-0201862_40	PHROG	phrog_3878	NA	unknown function
UHGV-0201862_40	Structural annotation	PF18895	NA	NA
UHGV-0201862_45	PHROG	phrog_9804	NA	unknown function
UHGV-0201862_45	UniRef90	UniRef90_A0A1C5TFI8	Inhibitor_G39P domain-containing protein	NA
UHGV-0201862_45	eggNOG-mapper	568816.Acin_1250	NA	NA
UHGV-0201862_45	AcrCatalog	cluster_137185	NA	NA
UHGV-0201862_45	Structural annotation	PF11417	NA	NA
UHGV-0201862_46	PHROG	phrog_11769	NA	unknown function
UHGV-0201862_46	UniRef90	UniRef90_A0A7X3BW49	DnaD domain protein	NA
UHGV-0201862_46	eggNOG-mapper	1035189.HMPREF9954_1960	Replication initiation and membrane attachment	NA
UHGV-0201862_46	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0201862_46	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0201862_46	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0201862_46	Structural annotation	PF09681, TIGR01714, COG3355	NA	NA
UHGV-0201862_48	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0201862_48	UniRef90	UniRef90_A0A8D9PDS2	NinB protein	NA
UHGV-0201862_48	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0201862_48	Structural annotation	PF05772, NF007281	NA	NA
UHGV-0201862_49	PHROG	phrog_7566	NA	unknown function
UHGV-0201862_49	UniRef90	UniRef90_UPI0015935946	phosphoenolpyruvate carboxykinase	NA
UHGV-0201862_49	eggNOG-mapper	411902.CLOBOL_05695	NA	NA
UHGV-0201862_50	PHROG	phrog_155	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0201862_50	UniRef90	UniRef90_A0A843HP81	ERF family protein	NA
UHGV-0201862_50	eggNOG-mapper	1522092.A0A090D840_9CAUD	ERF superfamily	NA
UHGV-0201862_50	Pfam	PF04404	ERF superfamily	ERF
UHGV-0201862_50	Structural annotation	PF04404, TIGR00607, COG4712	NA	NA
UHGV-0201862_51	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0201862_51	UniRef90	UniRef90_UPI001030DCF8	siphovirus Gp157 family protein	NA
UHGV-0201862_51	eggNOG-mapper	748224.HMPREF9436_03356	Siphovirus Gp157	NA
UHGV-0201862_51	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0201862_51	Structural annotation	PF05565	NA	NA
UHGV-0201862_53	UniRef90	UniRef90_UPI0008D9BBE4	helix-turn-helix domain-containing protein	NA
UHGV-0201862_53	eggNOG-mapper	500632.CLONEX_03295	NA	NA
UHGV-0201862_53	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0201862_53	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0201862_55	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0201862_55	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0201862_55	UniRef90	UniRef90_UPI000A1723B1	phage antirepressor KilAC domain-containing protein	NA
UHGV-0201862_55	eggNOG-mapper	642492.Clole_1828	Phage antirepressor protein	NA
UHGV-0201862_55	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0201862_55	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0201862_55	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0201862_55	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-0201862_55	Structural annotation	PF03374, PF02498, COG3645	NA	NA
UHGV-0201862_56	Structural annotation	PF13601, TIGR04176, COG1846	NA	NA
UHGV-0201862_58	eggNOG-mapper	411474.COPEUT_01987	NA	NA
UHGV-0201862_58	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0201862_58	COG	COG3311	DNA-binding transcriptional regulator AlpA	NA
UHGV-0201862_62	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0201862_62	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0201862_62	UniRef90	UniRef90_UPI0008DAC310	phage antirepressor	NA
UHGV-0201862_62	eggNOG-mapper	573061.Clocel_3580	Phage antirepressor protein	NA
UHGV-0201862_62	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0201862_62	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0201862_62	COG	COG3617	Prophage antirepressor	NA
UHGV-0201862_62	Structural annotation	PF03374, PF02498, TIGR02681, COG3617, COG3645	NA	NA
UHGV-0201862_63	UniRef90	UniRef90_UPI000E31DAF9	helix-turn-helix domain-containing protein	NA
UHGV-0201862_63	eggNOG-mapper	1111454.HMPREF1250_1031	NA	NA
UHGV-0201862_63	Pfam	PF02954	Bacterial regulatory protein, Fis family	HTH_8
UHGV-0201862_63	Structural annotation	PF05339, NF041951, COG3655	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0201862	Yes	44,684 bps	47.31%	100.00%	0.9777
UHGV-0150769	No	44,767 bps	47.31%	99.90%	0.9791
UHGV-1445708	No	44,767 bps	47.31%	99.90%	0.9791
UHGV-1445709	No	44,759 bps	47.31%	99.90%	0.9785