vOTU-047551

Overview

vOTU representative UHGV-0202126

No. of genomes 5

Genome length 40,644 bps

Completeness 100.00% (complete)

Host Enterococcus A avium

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047551
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-01630 › vGENUS-20066 › vSUBGEN-39283 › vOTU-047551
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Enterococcaceae › Enterococcus A › Enterococcus A avium
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202126
BioSample	SAMN05826621
Genome length	40,644 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	52
CDS density	91.59%
tRNA count	1
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0202126_1	PHROG	phrog_834	NA	unknown function
UHGV-0202126_1	eggNOG-mapper	977801.F0PIH4_9VIRU	NA	NA
UHGV-0202126_5	PHROG	phrog_14313	NA	unknown function
UHGV-0202126_5	eggNOG-mapper	1284352.AOIG01000022_gene3779	NA	NA
UHGV-0202126_7	KOfam	K07505	repA; regulatory protein RepA	NA
UHGV-0202126_7	PHROG	phrog_2597	DNA primase	DNA, RNA and nucleotide metabolism
UHGV-0202126_7	UniRef90	UniRef90_R2VI30	PriCT_2 domain-containing protein	NA
UHGV-0202126_7	eggNOG-mapper	1158614.I592_02280	Primase C terminal 2 (PriCT-2)	NA
UHGV-0202126_7	Pfam	PF08707	Primase C terminal 2 (PriCT-2)	PriCT_2
UHGV-0202126_7	Pfam	PF13481	AAA domain	AAA_25
UHGV-0202126_7	COG	COG3598	RecA-family ATPase	NA
UHGV-0202126_7	Structural annotation	PF13481, PF16793, PF08220, MF_00350, MF_00700, NF006606, NF001641, COG3598, COG3285	NA	NA
UHGV-0202126_8	PHROG	phrog_2169	membrane protein	moron, auxiliary metabolic gene and host takeover
UHGV-0202126_8	eggNOG-mapper	1158614.I592_02279	NA	NA
UHGV-0202126_9	PHROG	phrog_3221	NA	unknown function
UHGV-0202126_9	UniRef90	UniRef90_A0A7U6QV45	NA	NA
UHGV-0202126_9	eggNOG-mapper	1443125.Z962_p0024	NA	NA
UHGV-0202126_9	Pfam	PF12677	NA	DUF3797
UHGV-0202126_10	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0202126_10	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0202126_10	UniRef90	UniRef90_S4EYJ0	Crossover junction endodeoxyribonuclease RusA	NA
UHGV-0202126_10	eggNOG-mapper	1158614.I592_02277	Endodeoxyribonuclease RusA	NA
UHGV-0202126_10	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0202126_10	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0202126_10	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0202126_11	PHROG	phrog_3745	NA	unknown function
UHGV-0202126_11	UniRef90	UniRef90_A0A0V8E9C3	NA	NA
UHGV-0202126_11	eggNOG-mapper	1158614.I592_02276	NA	NA
UHGV-0202126_12	PHROG	phrog_1558	NA	unknown function
UHGV-0202126_12	UniRef90	UniRef90_UPI0012FCC67E	helix-turn-helix domain-containing protein	NA
UHGV-0202126_12	eggNOG-mapper	1158614.I592_02275	NA	NA
UHGV-0202126_12	Structural annotation	TIGR01637, COG2739	NA	NA
UHGV-0202126_13	UniRef90	UniRef90_UPI001A97193C	heavy metal-binding domain-containing protein	NA
UHGV-0202126_13	Pfam	PF01906	Putative heavy-metal-binding	YbjQ_1
UHGV-0202126_14	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0202126_14	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0202126_14	UniRef90	UniRef90_A0A091C654	Terminase small subunit	NA
UHGV-0202126_14	eggNOG-mapper	1158614.I592_02274	Terminase small subunit	NA
UHGV-0202126_14	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0202126_14	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0202126_15	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0202126_15	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0202126_15	UniRef90	UniRef90_A0A2N8PZ64	PBSX family phage terminase large subunit	NA
UHGV-0202126_15	eggNOG-mapper	1158614.I592_02273	Terminase RNAseH like domain	NA
UHGV-0202126_15	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0202126_15	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0202126_15	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0202126_15	COG	COG1783	Phage terminase large subunit	NA
UHGV-0202126_15	HAMAP	MF_04145	Terminase, large subunit	NA
UHGV-0202126_15	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0202126_16	PHROG	phrog_64	portal protein	head and packaging
UHGV-0202126_16	UniRef90	UniRef90_A0A2N8PZ73	Phage portal protein	NA
UHGV-0202126_16	eggNOG-mapper	1158614.I592_02272	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0202126_16	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0202126_16	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0202126_16	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0202126_17	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0202126_17	UniRef90	UniRef90_A0A2N8PZ72	Phage head morphogenesis protein	NA
UHGV-0202126_17	eggNOG-mapper	1158614.I592_02270	Phage Mu protein F like protein	NA
UHGV-0202126_17	Pfam	PF04233	Phage Mu protein F like protein	Phage_Mu_F
UHGV-0202126_17	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0202126_17	COG	COG2369	NA	NA
UHGV-0202126_17	Structural annotation	PF04233, TIGR01641, COG2369	NA	NA
UHGV-0202126_18	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0202126_18	UniRef90	UniRef90_A0A2N8PZ95	Phage capsid protein	NA
UHGV-0202126_18	eggNOG-mapper	1158614.I592_02268	NA	NA
UHGV-0202126_18	Pfam	PF14265	NA	DUF4355
UHGV-0202126_18	Structural annotation	PF14265	NA	NA
UHGV-0202126_19	PHROG	phrog_544	major head protein	head and packaging
UHGV-0202126_19	UniRef90	UniRef90_UPI000F051B08	phage capsid protein	NA
UHGV-0202126_19	eggNOG-mapper	673832.D2IYW7_9CAUD	NA	NA
UHGV-0202126_19	Structural annotation	PF03864, MF_04119, TIGR04387, COG4834	NA	NA
UHGV-0202126_20	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0202126_20	UniRef90	UniRef90_UPI001A975166	phage head-tail connector protein	NA
UHGV-0202126_20	eggNOG-mapper	1158614.I592_02266	Phage gp6-like head-tail connector protein	NA
UHGV-0202126_20	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0202126_20	Structural annotation	PF05135	NA	NA
UHGV-0202126_21	PHROG	phrog_348	minor head protein	head and packaging
UHGV-0202126_21	eggNOG-mapper	1158614.I592_02265	NA	NA
UHGV-0202126_21	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0202126_22	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0202126_22	UniRef90	UniRef90_R2VIQ4	HK97 gp10 family phage protein	NA
UHGV-0202126_22	eggNOG-mapper	1158614.I592_02264	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0202126_22	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0202126_22	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0202126_22	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0202126_23	PHROG	phrog_176	tail terminator	connector
UHGV-0202126_23	eggNOG-mapper	1158614.I592_02263	NA	NA
UHGV-0202126_23	Structural annotation	PF06141, MF_00281, COG0016	NA	NA
UHGV-0202126_24	PHROG	phrog_238	major tail protein	tail
UHGV-0202126_24	UniRef90	UniRef90_R2XSK6	TP901-1 family phage major tail protein	NA
UHGV-0202126_24	eggNOG-mapper	1158614.I592_02262	Phage tail tube protein	NA
UHGV-0202126_24	Pfam	PF06199	Phage tail tube protein	Phage_tail_2
UHGV-0202126_24	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-0202126_24	COG	COG5492	NA	NA
UHGV-0202126_24	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0202126_25	PHROG	phrog_341	major tail protein	tail
UHGV-0202126_25	UniRef90	UniRef90_A0A377KND4	Phage major tail protein, putative	NA
UHGV-0202126_25	eggNOG-mapper	1158614.I592_00628	PFAM Bacterial Ig-like domain (group 2)	NA
UHGV-0202126_25	COG	COG5492	NA	NA
UHGV-0202126_26	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0202126_26	UniRef90	UniRef90_A0A4V0ECJ0	NA	NA
UHGV-0202126_26	eggNOG-mapper	1158614.I592_02261	Phage tail assembly chaperone protein, TAC	NA
UHGV-0202126_26	Pfam	PF12363	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
UHGV-0202126_26	Structural annotation	PF12363	NA	NA
UHGV-0202126_27	PHROG	phrog_2567	NA	unknown function
UHGV-0202126_28	PHROG	phrog_1204	tail protein	tail
UHGV-0202126_28	UniRef90	UniRef90_A0A2N8PZ61	Phage tail tape measure protein	NA
UHGV-0202126_28	eggNOG-mapper	1158614.I592_02260	nuclear chromosome segregation	NA
UHGV-0202126_28	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0202126_28	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0202126_28	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0202126_28	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0202126_29	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0202126_29	UniRef90	UniRef90_A0A2N8PZ85	Phage tail protein	NA
UHGV-0202126_29	eggNOG-mapper	1158614.I592_02259	Phage tail protein	NA
UHGV-0202126_29	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0202126_29	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0202126_30	PHROG	phrog_3095	tail protein with endopeptidase activity	other
UHGV-0202126_30	UniRef90	UniRef90_A0A2N8PZ48	Prophage_tail domain-containing protein	NA
UHGV-0202126_30	eggNOG-mapper	1158614.I592_02258	Prophage endopeptidase tail	NA
UHGV-0202126_30	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0202126_30	COG	COG4926	Phage-related protein	NA
UHGV-0202126_30	Structural annotation	PF06605, PF18994, PF18463, TIGR01665, COG4926	NA	NA
UHGV-0202126_31	KOfam	K01126	E3.1.4.46, glpQ, ugpQ; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]	NA
UHGV-0202126_31	PHROG	phrog_19279	phosphodiesterase	other
UHGV-0202126_31	UniRef90	UniRef90_UPI001C0F7C72	BppU family phage baseplate upper protein	NA
UHGV-0202126_31	eggNOG-mapper	1140002.I570_03998	NA	NA
UHGV-0202126_31	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0202126_31	Pfam	PF03009	Glycerophosphoryl diester phosphodiesterase family	GDPD
UHGV-0202126_31	COG	COG0584	Glycerophosphoryl diester phosphodiesterase	NA
UHGV-0202126_32	PHROG	phrog_1893	NA	unknown function
UHGV-0202126_32	UniRef90	UniRef90_T2F7N5	Phage-related protein	NA
UHGV-0202126_32	eggNOG-mapper	1158601.I585_01144	NA	NA
UHGV-0202126_33	PHROG	phrog_881	holin	lysis
UHGV-0202126_33	UniRef90	UniRef90_A0A2N8PZ46	Holin	NA
UHGV-0202126_33	eggNOG-mapper	1158614.I592_02317	Putative phage holin Dp-1	NA
UHGV-0202126_33	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0202126_33	Structural annotation	PF16938	NA	NA
UHGV-0202126_34	KOfam	K22409	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0202126_34	PHROG	phrog_291	endolysin	lysis
UHGV-0202126_34	UniRef90	UniRef90_A0A2N8PZ38	1,4-beta-N-acetylmuramidase	NA
UHGV-0202126_34	eggNOG-mapper	673837.D2IZV5_9CAUD	peptidoglycan catabolic process	NA
UHGV-0202126_34	Pfam	PF01183	Glycosyl hydrolases family 25	Glyco_hydro_25
UHGV-0202126_34	Pfam	PF01476	LysM domain	LysM
UHGV-0202126_34	Structural annotation	PF01476, PF18697, TIGR02899, COG3757, COG1388	NA	NA
UHGV-0202126_35	KOfam	K14059	int; integrase	NA
UHGV-0202126_35	PHROG	phrog_1	integrase	integration and excision
UHGV-0202126_35	UniRef90	UniRef90_A0A2N8PZ89	Site-specific integrase	NA
UHGV-0202126_35	eggNOG-mapper	1347369.CCAD010000021_gene1565	Belongs to the 'phage' integrase family	NA
UHGV-0202126_35	Pfam	PF14657	Arm DNA-binding domain	Arm-DNA-bind_4
UHGV-0202126_35	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0202126_35	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0202126_35	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0202126_35	Structural annotation	PF00589, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0202126_36	PHROG	phrog_87	metallo-protease	other
UHGV-0202126_36	UniRef90	UniRef90_A0A2N8PZA4	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0202126_36	eggNOG-mapper	1121864.OMO_02128	IrrE N-terminal-like domain	NA
UHGV-0202126_36	Pfam	PF20573	NA	DUF6782
UHGV-0202126_36	Structural annotation	PF13058, MF_00745, NF003339, COG2856	NA	NA
UHGV-0202126_37	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0202126_37	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0202126_37	UniRef90	UniRef90_UPI0011856D12	helix-turn-helix domain-containing protein	NA
UHGV-0202126_37	eggNOG-mapper	1300150.EMQU_2529	Helix-turn-helix XRE-family like proteins	NA
UHGV-0202126_37	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0202126_37	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0202126_37	Structural annotation	PF12844, NF041951, COG3655	NA	NA
UHGV-0202126_38	PHROG	phrog_1468	transcriptional repressor	transcription regulation
UHGV-0202126_38	UniRef90	UniRef90_A0A2N8PZC3	Helix-turn-helix domain-containing protein	NA
UHGV-0202126_38	eggNOG-mapper	226185.EF_2849	NA	NA
UHGV-0202126_38	Structural annotation	PF12844, NF041677, COG3655	NA	NA
UHGV-0202126_40	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0202126_40	UniRef90	UniRef90_UPI000B2AC675	Rha family transcriptional regulator	NA
UHGV-0202126_40	eggNOG-mapper	1158604.I591_00383	ORF6C domain	NA
UHGV-0202126_40	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0202126_40	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0202126_41	PHROG	phrog_373	anti-repressor	transcription regulation
UHGV-0202126_41	UniRef90	UniRef90_UPI0008A4F3E7	Rha family transcriptional regulator	NA
UHGV-0202126_41	eggNOG-mapper	1201292.DR75_1539	ORF6C domain	NA
UHGV-0202126_41	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0202126_41	Pfam	PF10552	ORF6C domain	ORF6C
UHGV-0202126_41	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0202126_41	COG	COG3646	Phage regulatory protein Rha	NA
UHGV-0202126_42	PHROG	phrog_323	endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0202126_42	UniRef90	UniRef90_UPI0010F73185	helix-turn-helix domain containing protein	NA
UHGV-0202126_42	eggNOG-mapper	1158614.I592_02296	NA	NA
UHGV-0202126_42	dbAPIS	APIS006	Trigger programmed cell death (PCD) by P4 prophage.	NA
UHGV-0202126_42	Structural annotation	PF20800, PF00196, NF040595, TIGR04203, COG2771	NA	NA
UHGV-0202126_43	KOfam	K03546	sbcC, rad50; DNA repair protein SbcC/Rad50	NA
UHGV-0202126_43	PHROG	phrog_1499	NA	unknown function
UHGV-0202126_43	UniRef90	UniRef90_UPI0010F99569	AAA family ATPase	NA
UHGV-0202126_43	eggNOG-mapper	1158614.I592_02295	AAA domain	NA
UHGV-0202126_43	PADLOC	AAA_15	NA	NA
UHGV-0202126_43	Pfam	PF13476	AAA domain	AAA_23
UHGV-0202126_43	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0202126_43	Structural annotation	PF11398, MF_00365, TIGR00634, COG0497	NA	NA
UHGV-0202126_44	PHROG	phrog_124	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0202126_44	UniRef90	UniRef90_UPI0010F5FFD9	ATP-binding protein	NA
UHGV-0202126_44	eggNOG-mapper	1158614.I592_02294	AAA domain	NA
UHGV-0202126_44	Pfam	PF13479	AAA domain	AAA_24
UHGV-0202126_44	Structural annotation	PF13479, MF_00268, TIGR01618, COG0468	NA	NA
UHGV-0202126_45	PHROG	phrog_2698	NA	unknown function
UHGV-0202126_45	UniRef90	UniRef90_A0A0R2KFV1	NA	NA
UHGV-0202126_45	eggNOG-mapper	1158614.I592_02293	NA	NA
UHGV-0202126_45	Structural annotation	PF05037	NA	NA
UHGV-0202126_46	PHROG	phrog_997	replication terminator	DNA, RNA and nucleotide metabolism
UHGV-0202126_46	UniRef90	UniRef90_A0A7T4GAR5	Replication terminator protein	NA
UHGV-0202126_46	eggNOG-mapper	1158614.I592_02292	NA	NA
UHGV-0202126_47	PHROG	phrog_1029	NA	unknown function
UHGV-0202126_47	eggNOG-mapper	1158614.I592_02291	NA	NA
UHGV-0202126_47	Structural annotation	PF10065, COG5532	NA	NA
UHGV-0202126_48	PHROG	phrog_36282	NA	unknown function
UHGV-0202126_49	PHROG	phrog_1305	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0202126_49	UniRef90	UniRef90_UPI000A18C362	NA	NA
UHGV-0202126_49	eggNOG-mapper	861455.HMPREF9184_01014	NA	NA
UHGV-0202126_49	Structural annotation	COG2250	NA	NA
UHGV-0202126_50	KOfam	K17677	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	NA
UHGV-0202126_50	PHROG	phrog_16	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0202126_50	UniRef90	UniRef90_A0A7U6L3H8	Putative DEAD box family helicase, phage associated	NA
UHGV-0202126_50	eggNOG-mapper	1158614.I592_02288	helicase superfamily c-terminal domain	NA
UHGV-0202126_50	PADLOC	mREase_IV_00005	Type IV methyl-directed restriction enzyme	RM
UHGV-0202126_50	Pfam	PF04851	Type III restriction enzyme, res subunit	ResIII
UHGV-0202126_50	Pfam	PF00271	Helicase conserved C-terminal domain	Helicase_C
UHGV-0202126_50	COG	COG1061	Superfamily II DNA or RNA helicase	NA
UHGV-0202126_50	Structural annotation	PF04851, PF16203, MF_01489, NF008521, COG1061	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0202126	Yes	40,644 bps	38.44%	100.00%	0.9750
UHGV-0294866	No	40,686 bps	38.45%	98.21%	0.9750
UHGV-1707100	No	17,239 bps	38.44%	41.00%	0.9793
UHGV-1822063	No	15,807 bps	38.46%	37.64%	0.9786
UHGV-1658131	No	11,195 bps	39.69%	26.70%	0.9825