vOTU-047564

Overview

vOTU representative UHGV-0202491

No. of genomes 2

Genome length 35,227 bps

Completeness 100.00% (complete)

Host ERR7738602 bin.157

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047564
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00060 › vSUBFAM-01969 › vGENUS-02224 › vSUBGEN-16805 › vOTU-047564
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Christensenellales › MARSEILLE-P3954 › RGIG9107 › ERR7738602 bin.157
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0202491
BioSample	SAMN09781741
Genome length	35,227 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	56
CDS density	92.10%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0202491_3	KOfam	K07319	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	NA
UHGV-0202491_3	PHROG	phrog_498	DNA methyltransferase	other
UHGV-0202491_3	UniRef90	UniRef90_R5AIZ8	Methyltransferase	NA
UHGV-0202491_3	eggNOG-mapper	1423758.BN55_01455	DNA methylase	NA
UHGV-0202491_3	PADLOC	MTase_II_00015	Type II methyltransferase	RM
UHGV-0202491_3	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0202491_3	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0202491_3	COG	COG0863	DNA modification methylase	NA
UHGV-0202491_3	Structural annotation	PF01555, PF02195, MF_02015, MF_01872, NF010253, TIGR04285, COG0863, COG1475	NA	NA
UHGV-0202491_5	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0202491_5	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0202491_5	UniRef90	UniRef90_A0A2V2F595	PBSX family phage terminase large subunit	NA
UHGV-0202491_5	eggNOG-mapper	642492.Clole_0814	Phage terminase, large subunit, PBSX family	NA
UHGV-0202491_5	Pfam	PF03237	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
UHGV-0202491_5	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0202491_5	COG	COG1783	Phage terminase large subunit	NA
UHGV-0202491_5	Structural annotation	PF04466, PF20441, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0202491_6	PHROG	phrog_533	portal protein	head and packaging
UHGV-0202491_6	UniRef90	UniRef90_UPI000C8223FC	phage portal protein	NA
UHGV-0202491_6	eggNOG-mapper	428125.CLOLEP_01803	NA	NA
UHGV-0202491_6	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0202491_6	NCBIFam	TIGR01542.1	phage portal protein	NA
UHGV-0202491_6	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0202491_7	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0202491_7	UniRef90	UniRef90_A7VTB0	Phage minor capsid protein 2	NA
UHGV-0202491_7	eggNOG-mapper	428125.CLOLEP_01802	NA	NA
UHGV-0202491_7	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0202491_7	COG	COG2369	NA	NA
UHGV-0202491_7	Structural annotation	PF06152	NA	NA
UHGV-0202491_9	Structural annotation	PF14530, MF_01441, NF009990, COG0783	NA	NA
UHGV-0202491_11	PHROG	phrog_422	major head protein	head and packaging
UHGV-0202491_11	UniRef90	UniRef90_A0A316T938	S-l_SbsC_C domain-containing protein	NA
UHGV-0202491_11	eggNOG-mapper	428125.CLOLEP_00183	COG NOG28280 non supervised orthologous group	NA
UHGV-0202491_11	Structural annotation	PF19821, PF18316, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0202491_12	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0202491_13	PHROG	phrog_793	head-tail adaptor	connector
UHGV-0202491_13	UniRef90	UniRef90_A0A3R6PPU3	Minor capsid protein	NA
UHGV-0202491_13	Pfam	PF10665	Minor capsid protein	Minor_capsid_1
UHGV-0202491_13	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0202491_14	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0202491_14	eggNOG-mapper	1295642.H839_08329	Minor capsid protein	NA
UHGV-0202491_14	Pfam	PF11114	Minor capsid protein	Minor_capsid_2
UHGV-0202491_14	Structural annotation	PF11114	NA	NA
UHGV-0202491_15	PHROG	phrog_913	minor head protein	head and packaging
UHGV-0202491_15	Structural annotation	PF12691	NA	NA
UHGV-0202491_16	PHROG	phrog_820	major tail protein	tail
UHGV-0202491_16	UniRef90	UniRef90_A0A3A6EPU8	S-l_SbsC_C domain-containing protein	NA
UHGV-0202491_16	eggNOG-mapper	428125.CLOLEP_00178	Belongs to the glycosyl hydrolase family 6	NA
UHGV-0202491_16	COG	COG5492	NA	NA
UHGV-0202491_16	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0202491_18	PHROG	phrog_706	NA	unknown function
UHGV-0202491_18	UniRef90	UniRef90_A0A143ZUS4	Bacteriophage Gp15 protein	NA
UHGV-0202491_18	eggNOG-mapper	428125.CLOLEP_01787	Bacteriophage Gp15 protein	NA
UHGV-0202491_18	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0202491_18	Structural annotation	PF06854	NA	NA
UHGV-0202491_19	PHROG	phrog_9959	tail length tape measure protein	tail
UHGV-0202491_19	eggNOG-mapper	411470.RUMGNA_02228	tape measure	NA
UHGV-0202491_19	Pfam	PF20155	Tape measure protein	TMP_3
UHGV-0202491_19	NCBIFam	TIGR02675.1	tape measure protein	NA
UHGV-0202491_19	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0202491_19	Structural annotation	PF20155, COG3941	NA	NA
UHGV-0202491_20	NCBIFam	TIGR01633.1	distal tail protein Dit	NA
UHGV-0202491_21	PHROG	phrog_12312	virion structural protein	head and packaging
UHGV-0202491_21	UniRef90	UniRef90_UPI001030044F	phage tail protein	NA
UHGV-0202491_21	eggNOG-mapper	596315.HMPREF0634_0228	Phage minor structural protein	NA
UHGV-0202491_21	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0202491_21	NCBIFam	TIGR01665.1	phage tail spike protein	NA
UHGV-0202491_21	COG	COG4926	Phage-related protein	NA
UHGV-0202491_22	PHROG	phrog_372	tail protein	tail
UHGV-0202491_22	UniRef90	UniRef90_A0A1Y4MZW4	Fibronectin type-III domain-containing protein	NA
UHGV-0202491_22	eggNOG-mapper	1507.HMPREF0262_01190	NA	NA
UHGV-0202491_22	Pfam	PF05895	NA	DUF859
UHGV-0202491_22	COG	COG4675	Phage tail collar domain	NA
UHGV-0202491_22	Structural annotation	PF05895, MF_04116, NF010681, COG3291	NA	NA
UHGV-0202491_24	PHROG	phrog_937	hemolysin	other
UHGV-0202491_24	eggNOG-mapper	1519439.JPJG01000023_gene533	NA	NA
UHGV-0202491_25	PHROG	phrog_355	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UHGV-0202491_25	UniRef90	UniRef90_A0A416ZL61	NA	NA
UHGV-0202491_25	eggNOG-mapper	1256908.HMPREF0373_00479	NA	NA
UHGV-0202491_25	Pfam	PF14359	NA	DUF4406
UHGV-0202491_25	Structural annotation	PF14359, MF_03036, TIGR03646, COG3613	NA	NA
UHGV-0202491_26	PHROG	phrog_881	holin	lysis
UHGV-0202491_26	UniRef90	UniRef90_A0A317M6V7	Dp-1 family holin	NA
UHGV-0202491_26	eggNOG-mapper	742740.HMPREF9474_02251	Putative phage holin Dp-1	NA
UHGV-0202491_26	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0202491_26	Structural annotation	PF16938	NA	NA
UHGV-0202491_27	PHROG	phrog_21825	endolysin	lysis
UHGV-0202491_27	UniRef90	UniRef90_A0A7G9B2R2	CHAP domain-containing protein	NA
UHGV-0202491_27	eggNOG-mapper	1147.D082_05030	CHAP domain	NA
UHGV-0202491_27	Pfam	PF05257	CHAP domain	CHAP
UHGV-0202491_27	Pfam	PF09374	Predicted Peptidoglycan domain	PG_binding_3
UHGV-0202491_27	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0202491_27	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0202491_27	Structural annotation	PF05382, COG3409	NA	NA
UHGV-0202491_30	UniRef90	UniRef90_A0A1Q9JGI6	RHH_1 domain-containing protein	NA
UHGV-0202491_30	eggNOG-mapper	1033733.CAEK01000007_gene1628	NA	NA
UHGV-0202491_30	Structural annotation	PF08965, PF19849, NF041951, COG2944	NA	NA
UHGV-0202491_32	KOfam	K14059	int; integrase	NA
UHGV-0202491_32	PHROG	phrog_1	integrase	integration and excision
UHGV-0202491_32	UniRef90	UniRef90_A0A1Y4UHV7	Site-specific integrase	NA
UHGV-0202491_32	eggNOG-mapper	877414.ATWA01000018_gene2094	Phage integrase family	NA
UHGV-0202491_32	Pfam	PF14659	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
UHGV-0202491_32	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0202491_32	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0202491_32	Structural annotation	PF00589, PF02920, PF14659, MF_01808, TIGR02224, COG4974	NA	NA
UHGV-0202491_33	PHROG	phrog_4980	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UHGV-0202491_33	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0202491_33	Pfam	PF07553	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
UHGV-0202491_33	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0202491_34	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0202491_34	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0202491_34	UniRef90	UniRef90_A0A355SAN3	Transcriptional regulator	NA
UHGV-0202491_34	eggNOG-mapper	411467.BACCAP_04149	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0202491_34	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0202491_34	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0202491_34	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0202491_35	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0202491_35	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0202491_35	UniRef90	UniRef90_A0A417HG00	XRE family transcriptional regulator	NA
UHGV-0202491_35	eggNOG-mapper	1449347.JQLN01000007_gene1083	Helix-turn-helix XRE-family like proteins	NA
UHGV-0202491_35	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0202491_35	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0202491_36	UniRef90	UniRef90_R6MV99	DNA binding domain protein excisionase family	NA
UHGV-0202491_36	eggNOG-mapper	742723.HMPREF9477_00648	Helix-turn-helix domain	NA
UHGV-0202491_36	Pfam	PF12728	Helix-turn-helix domain	HTH_17
UHGV-0202491_36	NCBIFam	TIGR01764.1	excisionase family DNA-binding protein	NA
UHGV-0202491_42	PHROG	phrog_253	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UHGV-0202491_42	UniRef90	UniRef90_UPI001030DCF8	siphovirus Gp157 family protein	NA
UHGV-0202491_42	eggNOG-mapper	411470.RUMGNA_02192	Siphovirus Gp157	NA
UHGV-0202491_42	Pfam	PF05565	Siphovirus Gp157	Sipho_Gp157
UHGV-0202491_42	Structural annotation	PF05565	NA	NA
UHGV-0202491_43	PHROG	phrog_14970	NA	unknown function
UHGV-0202491_43	UniRef90	UniRef90_UPI00123F00F5	Rad52/Rad22 family DNA repair protein	NA
UHGV-0202491_43	eggNOG-mapper	411468.CLOSCI_00315	double-strand break repair protein	NA
UHGV-0202491_43	Pfam	PF04098	Rad52/22 family double-strand break repair protein	Rad52_Rad22
UHGV-0202491_43	COG	COG4712	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	NA
UHGV-0202491_43	Structural annotation	PF04098, TIGR00607, COG4712	NA	NA
UHGV-0202491_44	PHROG	phrog_72	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UHGV-0202491_44	UniRef90	UniRef90_UPI000C7BF263	recombination protein NinB	NA
UHGV-0202491_44	eggNOG-mapper	1507.HMPREF0262_00432	NA	NA
UHGV-0202491_44	Structural annotation	PF05772	NA	NA
UHGV-0202491_45	UniRef90	UniRef90_E6UL17	NA	NA
UHGV-0202491_45	eggNOG-mapper	411483.FAEPRAA2165_00603	NA	NA
UHGV-0202491_45	Pfam	PF19808	NA	DUF6291
UHGV-0202491_45	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0202491_45	Structural annotation	PF19808	NA	NA
UHGV-0202491_46	PHROG	phrog_9804	NA	unknown function
UHGV-0202491_46	UniRef90	UniRef90_A0A174S716	Inhibitor_G39P domain-containing protein	NA
UHGV-0202491_46	eggNOG-mapper	585394.RHOM_14005	Loader and inhibitor of phage G40P	NA
UHGV-0202491_46	AcrCatalog	cluster_137185	NA	NA
UHGV-0202491_46	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0202491_46	Structural annotation	PF11417	NA	NA
UHGV-0202491_48	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0202491_48	PHROG	phrog_140	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0202491_48	UniRef90	UniRef90_A0A1I0V589	Holliday junction resolvase RusA (Prophage-encoded endonuclease)	NA
UHGV-0202491_48	eggNOG-mapper	1127695.HMPREF9163_00374	crossover junction endodeoxyribonuclease	NA
UHGV-0202491_48	Pfam	PF05866	Endodeoxyribonuclease RusA	RusA
UHGV-0202491_48	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0202491_48	Structural annotation	PF05866, NF007305, COG4570	NA	NA
UHGV-0202491_49	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0202491_49	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0202491_49	UniRef90	UniRef90_A0A2V2FR21	Single-stranded DNA-binding protein	NA
UHGV-0202491_49	eggNOG-mapper	913865.DOT_1298	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0202491_49	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0202491_49	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0202491_49	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0202491_49	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0202491_49	Structural annotation	PF00436, MF_00984, NF005241, COG0629	NA	NA
UHGV-0202491_50	Pfam	PF13384	Homeodomain-like domain	HTH_23
UHGV-0202491_55	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0202491_55	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0202491_55	Structural annotation	PF04545, MF_00674, TIGR02980, COG1595	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0202491	Yes	35,227 bps	56.74%	100.00%	0.9790
UHGV-0177692	No	33,822 bps	56.91%	95.55%	0.9788