vOTU-047657

Overview

vOTU representative UHGV-0203364

No. of genomes 2

Genome length 34,947 bps

Completeness 100.00% (complete)

Host CAG-83

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047657
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 › vSUBFAM-03327 › vGENUS-07846 › vSUBGEN-06708 › vOTU-047657
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Oscillospirales › Oscillospiraceae › CAG-83
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0203364
BioSample	NA
Genome length	34,947 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	53
CDS density	91.80%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203364_1	KOfam	K02342	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	NA
UHGV-0203364_1	PHROG	phrog_192	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UHGV-0203364_1	UniRef90	UniRef90_UPI001873C260	3'-5' exoribonuclease	NA
UHGV-0203364_1	eggNOG-mapper	655812.HMPREF0061_0582	EXOIII	NA
UHGV-0203364_1	PADLOC	cd06127	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
UHGV-0203364_1	Pfam	PF00929	Exonuclease	RNase_T
UHGV-0203364_1	Pfam	PF00533	BRCA1 C Terminus (BRCT) domain	BRCT
UHGV-0203364_1	COG	COG0272	NAD-dependent DNA ligase	NA
UHGV-0203364_1	Structural annotation	PF00929, PF00533, MF_00157, NF005289, COG0847	NA	NA
UHGV-0203364_2	UniRef90	UniRef90_A0A7X3ASF1	XRE family transcriptional regulator	NA
UHGV-0203364_2	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0203364_4	PHROG	phrog_10292	NA	unknown function
UHGV-0203364_4	UniRef90	UniRef90_A0A173R9S2	TM2 domain	NA
UHGV-0203364_4	eggNOG-mapper	665956.HMPREF1032_00562	TM2 domain	NA
UHGV-0203364_4	Pfam	PF13240	zinc-ribbon domain	zinc_ribbon_2
UHGV-0203364_4	Pfam	PF05154	TM2 domain	TM2
UHGV-0203364_4	COG	COG2314	NA	NA
UHGV-0203364_4	Structural annotation	PF05154, PF12773, MF_00788, NF003161	NA	NA
UHGV-0203364_5	KOfam	K14059	int; integrase	NA
UHGV-0203364_5	PHROG	phrog_1	integrase	integration and excision
UHGV-0203364_5	UniRef90	UniRef90_UPI001EDEB0AD	site-specific integrase	NA
UHGV-0203364_5	eggNOG-mapper	1226322.HMPREF1545_00144	Belongs to the 'phage' integrase family	NA
UHGV-0203364_5	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0203364_5	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0203364_5	Structural annotation	PF00589, PF12167, MF_02055, NF040815, COG4974	NA	NA
UHGV-0203364_6	KOfam	K07726	K07726; putative transcriptional regulator	NA
UHGV-0203364_6	PHROG	phrog_25567	NA	unknown function
UHGV-0203364_6	UniRef90	UniRef90_UPI00164AED9E	helix-turn-helix domain-containing protein	NA
UHGV-0203364_6	eggNOG-mapper	1235798.C817_04600	NA	NA
UHGV-0203364_6	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0203364_6	Structural annotation	NF040522, COG2944	NA	NA
UHGV-0203364_8	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0203364_8	PHROG	phrog_1493	endolysin	lysis
UHGV-0203364_8	UniRef90	UniRef90_A0A350TLR9	Peptidoglycan-binding domain-containing protein	NA
UHGV-0203364_8	eggNOG-mapper	1504823.CCMM01000008_gene1019	Ami_2	NA
UHGV-0203364_8	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0203364_8	Pfam	PF01471	Putative peptidoglycan binding domain	PG_binding_1
UHGV-0203364_8	COG	COG3409	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	NA
UHGV-0203364_8	Structural annotation	PF01510, PF01471, MF_04111, NF008758, COG3023	NA	NA
UHGV-0203364_9	PHROG	phrog_881	holin	lysis
UHGV-0203364_9	UniRef90	UniRef90_UPI001D0692FC	phage holin	NA
UHGV-0203364_9	eggNOG-mapper	476272.RUMHYD_01966	Putative phage holin Dp-1	NA
UHGV-0203364_9	Pfam	PF16938	Putative phage holin Dp-1	Phage_holin_Dp1
UHGV-0203364_9	Structural annotation	PF16938	NA	NA
UHGV-0203364_10	PHROG	phrog_4105	NA	unknown function
UHGV-0203364_10	UniRef90	UniRef90_A0A8D9UHA9	Holin protein	NA
UHGV-0203364_10	eggNOG-mapper	411460.RUMTOR_01326	NA	NA
UHGV-0203364_11	PHROG	phrog_240	head protein	head and packaging
UHGV-0203364_12	Structural annotation	NF033746, COG3764	NA	NA
UHGV-0203364_13	eggNOG-mapper	1519439.JPJG01000060_gene1892	Collagen triple helix repeat (20 copies)	NA
UHGV-0203364_13	COG	COG3064	Membrane protein TolA involved in colicin uptake	NA
UHGV-0203364_17	PHROG	phrog_6616	tail protein	tail
UHGV-0203364_17	eggNOG-mapper	1507.HMPREF0262_00217	NA	NA
UHGV-0203364_17	Structural annotation	PF14594, NF033848, COG3500	NA	NA
UHGV-0203364_18	PHROG	phrog_1194	NA	unknown function
UHGV-0203364_18	eggNOG-mapper	1304866.K413DRAFT_3047	NA	NA
UHGV-0203364_18	Pfam	PF20458	NA	DUF6711
UHGV-0203364_18	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0203364_19	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0203364_19	eggNOG-mapper	1122989.KB898607_gene43	nuclear chromosome segregation	NA
UHGV-0203364_19	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0203364_21	PHROG	phrog_34587	NA	unknown function
UHGV-0203364_21	eggNOG-mapper	324057.Pjdr2_1550	NA	NA
UHGV-0203364_21	Structural annotation	PF11836	NA	NA
UHGV-0203364_22	PHROG	phrog_158	major tail protein	tail
UHGV-0203364_22	UniRef90	UniRef90_UPI000410101D	phage tail tube protein	NA
UHGV-0203364_22	eggNOG-mapper	1536773.R70331_25690	Phage tail tube protein	NA
UHGV-0203364_22	Pfam	PF16461	Lambda phage tail tube protein, TTP	Phage_TTP_12
UHGV-0203364_23	Structural annotation	PF12691	NA	NA
UHGV-0203364_24	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0203364_24	UniRef90	UniRef90_A0A1M4ZE79	Phage protein, HK97 gp10 family	NA
UHGV-0203364_24	eggNOG-mapper	1122919.KB905559_gene1352	Bacteriophage HK97-gp10, putative tail-component	NA
UHGV-0203364_24	Structural annotation	PF17395, TIGR01725	NA	NA
UHGV-0203364_25	PHROG	phrog_25	head closure Hc1	connector
UHGV-0203364_25	UniRef90	UniRef90_G1V603	Phage head-tail adaptor	NA
UHGV-0203364_25	eggNOG-mapper	1408428.JNJP01000182_gene2411	Phage head-tail joining protein	NA
UHGV-0203364_25	Pfam	PF05521	Phage head-tail joining protein	Phage_H_T_join
UHGV-0203364_25	NCBIFam	TIGR01563.1	phage head closure protein	NA
UHGV-0203364_25	COG	COG5614	Phage head-tail adaptor	NA
UHGV-0203364_25	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0203364_26	PHROG	phrog_40	head-tail adaptor Ad1	connector
UHGV-0203364_26	UniRef90	UniRef90_A0A8J6JAY9	Phage gp6-like head-tail connector protein	NA
UHGV-0203364_26	eggNOG-mapper	1120971.AUCA01000066_gene596	Phage gp6-like head-tail connector protein	NA
UHGV-0203364_26	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0203364_26	NCBIFam	TIGR01560.2	head-tail connector protein	NA
UHGV-0203364_26	Structural annotation	PF05135, TIGR01560	NA	NA
UHGV-0203364_27	eggNOG-mapper	1382356.JQMP01000004_gene547	Sh3 type 3 domain protein	NA
UHGV-0203364_27	Pfam	PF08239	Bacterial SH3 domain	SH3_3
UHGV-0203364_27	COG	COG3103	NA	NA
UHGV-0203364_28	PHROG	phrog_10	major head protein	head and packaging
UHGV-0203364_28	UniRef90	UniRef90_UPI00195B1FEC	phage major capsid protein	NA
UHGV-0203364_28	eggNOG-mapper	198094.BA_3784	Phage capsid family	NA
UHGV-0203364_28	Pfam	PF05065	Phage capsid family	Phage_capsid
UHGV-0203364_28	NCBIFam	TIGR01554.2	phage major capsid protein	NA
UHGV-0203364_28	COG	COG4653	Predicted phage phi-C31 gp36 major capsid-like protein	NA
UHGV-0203364_28	Structural annotation	PF05065, PF14182, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0203364_29	KOfam	K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	NA
UHGV-0203364_29	PHROG	phrog_94	head maturation protease	head and packaging
UHGV-0203364_29	UniRef90	UniRef90_A0A3D4EJM3	ATP-dependent Clp protease proteolytic subunit	NA
UHGV-0203364_29	eggNOG-mapper	1158614.I592_00621	Clp protease	NA
UHGV-0203364_29	Pfam	PF00574	Clp protease	CLP_protease
UHGV-0203364_29	COG	COG0740	ATP-dependent protease ClpP, protease subunit	NA
UHGV-0203364_29	Structural annotation	PF00574, MF_00444, NF011090, COG0740	NA	NA
UHGV-0203364_30	PHROG	phrog_12	portal protein	head and packaging
UHGV-0203364_30	UniRef90	UniRef90_A0A3D4EI33	Phage portal protein	NA
UHGV-0203364_30	eggNOG-mapper	1007103.AFHW01000142_gene1297	Phage portal protein	NA
UHGV-0203364_30	Pfam	PF04860	Phage portal protein	Phage_portal
UHGV-0203364_30	NCBIFam	TIGR01537.1	phage portal protein	NA
UHGV-0203364_30	COG	COG4695	Phage portal protein BeeE	NA
UHGV-0203364_30	Structural annotation	PF04860, MF_04135, TIGR01537, COG4695	NA	NA
UHGV-0203364_32	PHROG	phrog_9	terminase large subunit	head and packaging
UHGV-0203364_32	UniRef90	UniRef90_A0A6N3FX18	Phage Terminase	NA
UHGV-0203364_32	eggNOG-mapper	693746.OBV_20000	Phage terminase-like protein large subunit	NA
UHGV-0203364_32	Pfam	PF03354	Terminase large subunit, ATPase domain	TerL_ATPase
UHGV-0203364_32	Pfam	PF20441	Terminase large subunit, endonuclease domain	TerL_nuclease
UHGV-0203364_32	COG	COG4626	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	NA
UHGV-0203364_32	Structural annotation	PF20441, PF03354, MF_04145, TIGR01547, COG4626	NA	NA
UHGV-0203364_34	PHROG	phrog_83	terminase small subunit	head and packaging
UHGV-0203364_34	UniRef90	UniRef90_UPI0013EF20CD	P27 family phage terminase small subunit	NA
UHGV-0203364_34	Pfam	PF05119	Phage terminase, small subunit	Terminase_4
UHGV-0203364_34	Structural annotation	PF05119, TIGR01558, COG3747	NA	NA
UHGV-0203364_35	PHROG	phrog_144	HNH endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203364_35	UniRef90	UniRef90_A0A3D4EH89	HNH endonuclease	NA
UHGV-0203364_35	eggNOG-mapper	742738.HMPREF9460_00869	HNH endonuclease	NA
UHGV-0203364_35	COG	COG1403	5-methylcytosine-specific restriction endonuclease McrA	NA
UHGV-0203364_35	Structural annotation	PF01844, COG1403	NA	NA
UHGV-0203364_36	UniRef90	UniRef90_UPI001D092CDC	cysteine-rich KTR domain-containing protein	NA
UHGV-0203364_36	eggNOG-mapper	397290.C810_02586	Cysteine-rich KTR	NA
UHGV-0203364_36	Pfam	PF14205	Cysteine-rich KTR	Cys_rich_KTR
UHGV-0203364_36	Structural annotation	PF14205	NA	NA
UHGV-0203364_37	PHROG	phrog_3584	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0203364_37	eggNOG-mapper	742738.HMPREF9460_04063	NA	NA
UHGV-0203364_37	Structural annotation	PF01446	NA	NA
UHGV-0203364_46	KOfam	K03497	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	NA
UHGV-0203364_46	PHROG	phrog_27290	NA	unknown function
UHGV-0203364_46	UniRef90	UniRef90_G4L1G7	HTH cro/C1-type domain-containing protein	NA
UHGV-0203364_46	eggNOG-mapper	693746.OBV_19860	ParB-like nuclease domain	NA
UHGV-0203364_46	Pfam	PF02195	ParB/Sulfiredoxin domain	ParBc
UHGV-0203364_46	COG	COG1475	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	NA
UHGV-0203364_46	Structural annotation	PF12961, PF02195, MF_02015, MF_00684, TIGR04285, NF003443, COG1475, COG3097	NA	NA
UHGV-0203364_47	KOfam	K03496	parA, soj; chromosome partitioning protein	NA
UHGV-0203364_47	PHROG	phrog_164	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UHGV-0203364_47	UniRef90	UniRef90_UPI000318E277	ParA family protein	NA
UHGV-0203364_47	eggNOG-mapper	1007096.BAGW01000033_gene1614	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	NA
UHGV-0203364_47	Pfam	PF13614	AAA domain	AAA_31
UHGV-0203364_47	COG	COG1192	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	NA
UHGV-0203364_47	Structural annotation	PF13614, MF_00533, TIGR03453, COG1192	NA	NA
UHGV-0203364_48	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0203364_48	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0203364_48	UniRef90	UniRef90_U2SBV6	DNA helicase	NA
UHGV-0203364_48	eggNOG-mapper	1007096.BAGW01000033_gene1616	DnaB-like helicase N terminal domain	NA
UHGV-0203364_48	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0203364_48	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0203364_48	COG	COG0305	Replicative DNA helicase	NA
UHGV-0203364_48	Structural annotation	PF03796, PF00772, MF_04155, NF005240, COG0305	NA	NA
UHGV-0203364_49	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0203364_49	UniRef90	UniRef90_UPI001F33ADD3	helix-turn-helix domain-containing protein	NA
UHGV-0203364_49	eggNOG-mapper	1226322.HMPREF1545_00094	DnaD domain protein	NA
UHGV-0203364_49	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0203364_49	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0203364_49	Structural annotation	PF04182, NF040939, COG3355	NA	NA
UHGV-0203364_50	Structural annotation	PF21327	NA	NA
UHGV-0203364_52	PHROG	phrog_6499	transcriptional regulator	transcription regulation
UHGV-0203364_52	UniRef90	UniRef90_G9YL68	DNA-binding helix-turn-helix protein	NA
UHGV-0203364_52	eggNOG-mapper	742738.HMPREF9460_00847	Helix-turn-helix XRE-family like proteins	NA
UHGV-0203364_52	Pfam	PF13560	Helix-turn-helix domain	HTH_31
UHGV-0203364_52	COG	COG1813	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	NA
UHGV-0203364_52	Structural annotation	PF01381, MF_00535, NF040522, COG1476	NA	NA
UHGV-0203364_53	KOfam	K22300	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	NA
UHGV-0203364_53	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203364	Yes	34,947 bps	65.14%	100.00%	0.9765
UHGV-0191603	No	34,903 bps	65.53%	99.90%	0.9706