vOTU-047661

Overview

vOTU representative UHGV-0203392

No. of genomes 5

Genome length 42,543 bps

Completeness 100.00% (complete)

Host Alistipes A pullistercoris

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047661
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00131 › vSUBFAM-06497 › vGENUS-16478 › vSUBGEN-29781 › vOTU-047661
Host taxonomy	Bacteria › Bacteroidota › Bacteroidia › Bacteroidales › Rikenellaceae › Alistipes A › Alistipes A pullistercoris
Host range breadth	Species
Host prediction method	PHIST
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203392
BioSample	SAMN00070004
Genome length	42,543 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	46
CDS density	88.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203392_1	KOfam	K04763	xerD; integrase/recombinase XerD	NA
UHGV-0203392_1	PHROG	phrog_1	integrase	integration and excision
UHGV-0203392_1	UniRef90	UniRef90_UPI00189BF19D	phage integrase SAM-like domain-containing protein	NA
UHGV-0203392_1	eggNOG-mapper	445970.ALIPUT_01579	Belongs to the 'phage' integrase family	NA
UHGV-0203392_1	Pfam	PF17293	Arm DNA-binding domain	Arm-DNA-bind_5
UHGV-0203392_1	Pfam	PF13102	Phage integrase SAM-like domain	Phage_int_SAM_5
UHGV-0203392_1	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0203392_1	Structural annotation	PF13102, PF17293, MF_01808, NF007246, COG4973	NA	NA
UHGV-0203392_2	UniRef90	UniRef90_UPI001897E8A1	helix-turn-helix domain-containing protein	NA
UHGV-0203392_2	eggNOG-mapper	445970.ALIPUT_01580	PFAM Uncharacterised protein family UPF0150	NA
UHGV-0203392_2	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0203392_2	Structural annotation	PF21748, NF041951, COG1598	NA	NA
UHGV-0203392_6	eggNOG-mapper	457424.BFAG_02385	NA	NA
UHGV-0203392_8	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0203392_8	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0203392_8	UniRef90	UniRef90_A0A396M7W7	DNA adenine methylase	NA
UHGV-0203392_8	eggNOG-mapper	908612.HMPREF9720_0683	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0203392_8	PADLOC	MTase_II_00030	Type II methyltransferase	RM
UHGV-0203392_8	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0203392_8	COG	COG0338	DNA-adenine methylase	NA
UHGV-0203392_8	Structural annotation	PF02086, MF_01872, NF008152, COG0338	NA	NA
UHGV-0203392_10	Structural annotation	PF17457	NA	NA
UHGV-0203392_13	KOfam	K03530	hupB; DNA-binding protein HU-beta	NA
UHGV-0203392_13	PHROG	phrog_379	DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0203392_13	UniRef90	UniRef90_A0A1V5W9J0	DNA-binding protein HU	NA
UHGV-0203392_13	eggNOG-mapper	388413.ALPR1_01830	Belongs to the bacterial histone-like protein family	NA
UHGV-0203392_13	Pfam	PF00216	Bacterial DNA-binding protein	Bac_DNA_binding
UHGV-0203392_13	COG	COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	NA
UHGV-0203392_13	Structural annotation	PF00216, MF_00381, NF001222, COG0776	NA	NA
UHGV-0203392_15	PHROG	phrog_524	anti-repressor Ant	transcription regulation
UHGV-0203392_15	UniRef90	UniRef90_A0A352FE37	P22_AR_N domain-containing protein	NA
UHGV-0203392_15	eggNOG-mapper	1028806.GGE_2170	P22_AR N-terminal domain	NA
UHGV-0203392_15	Pfam	PF10547	P22_AR N-terminal domain	P22_AR_N
UHGV-0203392_15	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0203392_16	PHROG	phrog_524	anti-repressor Ant	transcription regulation
UHGV-0203392_16	UniRef90	UniRef90_A0A7Y0V6M0	Chromosome partitioning protein ParA	NA
UHGV-0203392_16	eggNOG-mapper	1028806.GGE_2170	P22_AR N-terminal domain	NA
UHGV-0203392_16	Pfam	PF10547	P22_AR N-terminal domain	P22_AR_N
UHGV-0203392_16	COG	COG3378	DNA primase, phage- or plasmid-associated	NA
UHGV-0203392_16	Structural annotation	PF10547, TIGR02681, COG3617	NA	NA
UHGV-0203392_18	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0203392_18	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0203392_18	UniRef90	UniRef90_UPI001897BF9E	replicative DNA helicase	NA
UHGV-0203392_18	eggNOG-mapper	1121097.JCM15093_402	Participates in initiation and elongation during chromosome replication	NA
UHGV-0203392_18	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0203392_18	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0203392_18	COG	COG0305	Replicative DNA helicase	NA
UHGV-0203392_18	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0203392_19	PHROG	phrog_1313	DNA helicase	DNA, RNA and nucleotide metabolism
UHGV-0203392_19	UniRef90	UniRef90_A0A1M4UM91	NA	NA
UHGV-0203392_19	eggNOG-mapper	1410613.JNKF01000011_gene986	NA	NA
UHGV-0203392_19	Pfam	PF05272	Virulence-associated protein E-like domain	VapE-like_dom
UHGV-0203392_19	COG	COG5545	Predicted P-loop ATPase and inactivated derivatives	NA
UHGV-0203392_19	Structural annotation	PF05272, PF12990, MF_04000, NF011296, COG5545	NA	NA
UHGV-0203392_22	KOfam	K21511	GPC; capsid assembly protease [EC:3.4.21.-]	NA
UHGV-0203392_22	PHROG	phrog_53	head maturation protease	head and packaging
UHGV-0203392_22	UniRef90	UniRef90_A0A7J5VXW2	ClpP class periplasmic serine	NA
UHGV-0203392_22	eggNOG-mapper	1210884.HG799462_gene8275	serine-type endopeptidase activity	NA
UHGV-0203392_22	Pfam	PF01343	Peptidase family S49	Peptidase_S49
UHGV-0203392_22	COG	COG0616	Periplasmic serine protease, ClpP class	NA
UHGV-0203392_23	eggNOG-mapper	1122986.KB908324_gene738	NA	NA
UHGV-0203392_23	Structural annotation	PF05065, MF_04119, TIGR01554, COG4653	NA	NA
UHGV-0203392_24	eggNOG-mapper	688246.Premu_0391	NA	NA
UHGV-0203392_24	Structural annotation	PF07316, TIGR01603	NA	NA
UHGV-0203392_26	eggNOG-mapper	742726.HMPREF9448_01187	NA	NA
UHGV-0203392_27	eggNOG-mapper	1002367.HMPREF0673_02207	NA	NA
UHGV-0203392_27	Structural annotation	PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0203392_28	PHROG	phrog_28718	NA	unknown function
UHGV-0203392_28	UniRef90	UniRef90_UPI000C15BFAF	DNA methyltransferase	NA
UHGV-0203392_28	eggNOG-mapper	575615.HMPREF0670_00644	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0203392_28	PADLOC	MTase_II_00054	Type II methyltransferase	RM
UHGV-0203392_28	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0203392_28	COG	COG0338	DNA-adenine methylase	NA
UHGV-0203392_28	Structural annotation	PF02086, TIGR00571, COG0338	NA	NA
UHGV-0203392_30	eggNOG-mapper	272559.BF9343_2219	NA	NA
UHGV-0203392_30	Structural annotation	PF06381, MF_04135, TIGR01540, COG5518	NA	NA
UHGV-0203392_31	eggNOG-mapper	264731.PRU_0922	NA	NA
UHGV-0203392_31	Pfam	PF20459	NA	DUF6712
UHGV-0203392_31	Structural annotation	PF20459	NA	NA
UHGV-0203392_35	PHROG	phrog_2523	NA	unknown function
UHGV-0203392_35	UniRef90	UniRef90_UPI000C780BE5	type II toxin-antitoxin system RelE/ParE family toxin	NA
UHGV-0203392_35	eggNOG-mapper	484018.BACPLE_02583	NA	NA
UHGV-0203392_35	Pfam	PF05973	NA	Gp49
UHGV-0203392_35	Structural annotation	PF05973, TIGR02385, COG4679	NA	NA
UHGV-0203392_36	KOfam	K15773	hipB; HTH-type transcriptional regulator / antitoxin HipB	NA
UHGV-0203392_36	PHROG	phrog_1373	transcriptional regulator	transcription regulation
UHGV-0203392_36	UniRef90	UniRef90_B5D0Q5	DNA-binding helix-turn-helix protein	NA
UHGV-0203392_36	eggNOG-mapper	1211813.CAPH01000015_gene740	sequence-specific DNA binding	NA
UHGV-0203392_36	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0203392_36	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0203392_36	COG	COG3620	Predicted transcriptional regulator, contains an XRE-type HTH domain (archaeal members contain CBS pair)	NA
UHGV-0203392_37	UniRef90	UniRef90_UPI001897E8A1	helix-turn-helix domain-containing protein	NA
UHGV-0203392_37	eggNOG-mapper	445970.ALIPUT_01580	PFAM Uncharacterised protein family UPF0150	NA
UHGV-0203392_37	COG	COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	NA
UHGV-0203392_40	PHROG	phrog_25337	tail length tape measure protein	tail
UHGV-0203392_40	UniRef90	UniRef90_A0A379MPS0	Phage tail tape measure protein, TP901 family, core region	NA
UHGV-0203392_40	eggNOG-mapper	880526.KE386488_gene460	Phage-related minor tail protein	NA
UHGV-0203392_40	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0203392_40	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0203392_40	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0203392_40	Structural annotation	PF10145, TIGR01760	NA	NA
UHGV-0203392_41	UniRef90	UniRef90_A0A3D6E9Q2	Fe2OG dioxygenase domain-containing protein	NA
UHGV-0203392_41	eggNOG-mapper	880526.KE386488_gene459	NA	NA
UHGV-0203392_41	Structural annotation	PF14594, NF033848, COG4379	NA	NA
UHGV-0203392_42	KOfam	K16628	COL7A; collagen type VII alpha	NA
UHGV-0203392_42	PHROG	phrog_15074	NA	unknown function
UHGV-0203392_42	eggNOG-mapper	411901.BACCAC_01130	COG3209 Rhs family protein	NA
UHGV-0203392_42	Pfam	PF01391	Collagen triple helix repeat (20 copies)	Collagen
UHGV-0203392_42	COG	COG4926	Phage-related protein	NA
UHGV-0203392_44	UniRef90	UniRef90_UPI001E535CC6	phage holin family protein	NA
UHGV-0203392_44	eggNOG-mapper	880074.BARVI_05555	NA	NA
UHGV-0203392_44	Structural annotation	PF05105, COG4824	NA	NA
UHGV-0203392_45	KOfam	K08640	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	NA
UHGV-0203392_45	PHROG	phrog_894	endolysin	lysis
UHGV-0203392_45	UniRef90	UniRef90_A0A3M8EKM0	Peptidase M15	NA
UHGV-0203392_45	eggNOG-mapper	1408428.JNJP01000012_gene1106	Peptidase M15	NA
UHGV-0203392_45	Pfam	PF08291	Peptidase M15	Peptidase_M15_3
UHGV-0203392_45	COG	COG3108	NA	NA
UHGV-0203392_45	Structural annotation	PF08291, NF007557, COG3108	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203392	Yes	42,543 bps	51.45%	100.00%	0.9522
UHGV-1955796	No	42,581 bps	51.47%	96.94%	0.9525
UHGV-2235964	No	22,224 bps	53.47%	50.69%	0.9571
UHGV-1803946	No	11,063 bps	56.22%	8.99%	0.8334
UHGV-2231710	No	10,497 bps	55.50%	6.02%	0.9373