vOTU-047664

Overview

vOTU representative UHGV-0203433

No. of genomes 5

Genome length 56,713 bps

Completeness 100.00% (complete)

Host Agathobacter

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047664
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 › vSUBFAM-00040 › vGENUS-00013 › vSUBGEN-29780 › vOTU-047664
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Agathobacter
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203433
BioSample	SAMN11893721
Genome length	56,713 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	89
CDS density	85.50%
tRNA count	6
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203433_2	PHROG	phrog_2185	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0203433_2	UniRef90	UniRef90_UPI00189B4EB8	recombinase RecT	NA
UHGV-0203433_2	eggNOG-mapper	658655.HMPREF0988_00886	NA	NA
UHGV-0203433_2	Pfam	PF03837	RecT family	RecT
UHGV-0203433_2	Structural annotation	NF007351, COG3723	NA	NA
UHGV-0203433_3	PHROG	phrog_25456	NA	unknown function
UHGV-0203433_5	KOfam	K06167	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	NA
UHGV-0203433_5	PHROG	phrog_392	metal-dependent hydrolase	other
UHGV-0203433_5	UniRef90	UniRef90_A0A173REW9	Beta-lactamase superfamily domain	NA
UHGV-0203433_5	eggNOG-mapper	1144313.PMI10_00501	Metallo-beta-lactamase superfamily	NA
UHGV-0203433_5	Pfam	PF12706	Beta-lactamase superfamily domain	Lactamase_B_2
UHGV-0203433_5	COG	COG1235	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	NA
UHGV-0203433_5	Structural annotation	PF02112, MF_01818, NF041851, COG1234	NA	NA
UHGV-0203433_8	PHROG	phrog_19106	NA	unknown function
UHGV-0203433_8	UniRef90	UniRef90_A0A173RDE6	Group I intron endonuclease	NA
UHGV-0203433_8	eggNOG-mapper	658655.HMPREF0988_00875	NA	NA
UHGV-0203433_8	Structural annotation	TIGR01453	NA	NA
UHGV-0203433_9	PHROG	phrog_11769	NA	unknown function
UHGV-0203433_9	UniRef90	UniRef90_A0A173RDT0	Phage replisome organizer, putative, N-terminal region	NA
UHGV-0203433_9	eggNOG-mapper	1567013.A0A0A7RTL4_9CAUD	calcium ion binding	NA
UHGV-0203433_9	Pfam	PF09681	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
UHGV-0203433_9	NCBIFam	TIGR01714.1	phage replisome organizer, putative, N-terminal region	NA
UHGV-0203433_9	Structural annotation	PF09681, TIGR01714, COG3388	NA	NA
UHGV-0203433_10	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0203433_10	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0203433_10	UniRef90	UniRef90_A0A173RD23	DNA helicase	NA
UHGV-0203433_10	eggNOG-mapper	1298920.KI911353_gene2061	Participates in initiation and elongation during chromosome replication	NA
UHGV-0203433_10	Pfam	PF00772	DnaB-like helicase N terminal domain	DnaB
UHGV-0203433_10	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0203433_10	COG	COG0305	Replicative DNA helicase	NA
UHGV-0203433_10	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0203433_13	PHROG	phrog_21026	NA	unknown function
UHGV-0203433_15	PHROG	phrog_8684	NA	unknown function
UHGV-0203433_15	UniRef90	UniRef90_A0A3R7C0X3	YopX domain-containing protein	NA
UHGV-0203433_15	eggNOG-mapper	1235794.C811_01545	NA	NA
UHGV-0203433_15	Pfam	PF09643	YopX protein	YopX
UHGV-0203433_15	Structural annotation	PF09643, TIGR01671	NA	NA
UHGV-0203433_16	eggNOG-mapper	397290.C810_05186	NA	NA
UHGV-0203433_18	PHROG	phrog_20593	NA	unknown function
UHGV-0203433_18	AcrCatalog	cluster_27421	NA	NA
UHGV-0203433_19	PHROG	phrog_874	NA	unknown function
UHGV-0203433_19	UniRef90	UniRef90_UPI0018F57B3A	ASCH domain-containing protein	NA
UHGV-0203433_19	eggNOG-mapper	411468.CLOSCI_00298	NA	NA
UHGV-0203433_19	Structural annotation	PF04266, MF_00684, NF003443, COG4405	NA	NA
UHGV-0203433_21	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0203433_21	PHROG	phrog_23224	DNA methyltransferase	other
UHGV-0203433_21	UniRef90	UniRef90_A0A3R6JG61	Methyltransferase	NA
UHGV-0203433_21	eggNOG-mapper	1123304.AQYA01000037_gene207	DNA methylase	NA
UHGV-0203433_21	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0203433_21	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0203433_21	COG	COG0863	DNA modification methylase	NA
UHGV-0203433_21	Structural annotation	PF01555, NF010253, COG0863	NA	NA
UHGV-0203433_22	UniRef90	UniRef90_A0A173RE24	Bacterial regulatory proteins, luxR family	NA
UHGV-0203433_22	Pfam	PF00196	Bacterial regulatory proteins, luxR family	GerE
UHGV-0203433_22	Structural annotation	PF00196, MF_00245, NF001067, COG2771	NA	NA
UHGV-0203433_23	KOfam	K14059	int; integrase	NA
UHGV-0203433_23	PHROG	phrog_1	integrase	integration and excision
UHGV-0203433_23	UniRef90	UniRef90_A0A173REA3	Site-specific tyrosine recombinase XerD	NA
UHGV-0203433_23	eggNOG-mapper	397291.C804_00897	Phage integrase family	NA
UHGV-0203433_23	Pfam	PF00589	Phage integrase family	Phage_integrase
UHGV-0203433_23	COG	COG0582	Integrase/recombinase, includes phage integrase	NA
UHGV-0203433_23	Structural annotation	PF00589, PF02920, MF_02055, TIGR02224, COG4974	NA	NA
UHGV-0203433_25	eggNOG-mapper	658655.HMPREF0988_00919	NA	NA
UHGV-0203433_26	eggNOG-mapper	658655.HMPREF0988_00918	NA	NA
UHGV-0203433_27	PHROG	phrog_16490	NA	unknown function
UHGV-0203433_27	eggNOG-mapper	397290.C810_01328	NA	NA
UHGV-0203433_29	PHROG	phrog_20016	NA	unknown function
UHGV-0203433_29	UniRef90	UniRef90_A0A285PT46	Tumour necrosis factor-like domain	NA
UHGV-0203433_29	eggNOG-mapper	397290.C810_05214	NA	NA
UHGV-0203433_29	Structural annotation	PF18573, NF033147	NA	NA
UHGV-0203433_30	eggNOG-mapper	658655.HMPREF0988_00915	NA	NA
UHGV-0203433_31	PHROG	phrog_1233	NA	unknown function
UHGV-0203433_31	eggNOG-mapper	658655.HMPREF0988_00914	NA	NA
UHGV-0203433_35	eggNOG-mapper	397290.C810_01348	NA	NA
UHGV-0203433_40	Structural annotation	PF19923	NA	NA
UHGV-0203433_41	eggNOG-mapper	658655.HMPREF0988_00895	NA	NA
UHGV-0203433_42	PHROG	phrog_229	MazG-like pyrophosphatase	other
UHGV-0203433_42	UniRef90	UniRef90_UPI001D02B1F9	nucleoside triphosphate pyrophosphohydrolase family protein	NA
UHGV-0203433_42	eggNOG-mapper	428125.CLOLEP_01391	MazG nucleotide pyrophosphohydrolase domain	NA
UHGV-0203433_42	Pfam	PF03819	MazG nucleotide pyrophosphohydrolase domain	MazG
UHGV-0203433_42	COG	COG1694	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	NA
UHGV-0203433_42	Structural annotation	PF03819, MF_01020, TIGR03188, COG1694	NA	NA
UHGV-0203433_43	eggNOG-mapper	411473.RUMCAL_02525	NA	NA
UHGV-0203433_45	UniRef90	UniRef90_A0A8D9PGN8	Acetyl-coA carboxylase zinc finger domain protein	NA
UHGV-0203433_48	UniRef90	UniRef90_UPI0011072322	NA	NA
UHGV-0203433_48	eggNOG-mapper	1256908.HMPREF0373_00479	NA	NA
UHGV-0203433_49	PHROG	phrog_38	terminase large subunit	head and packaging
UHGV-0203433_49	UniRef90	UniRef90_A0A8D9PG33	Terminase	NA
UHGV-0203433_49	eggNOG-mapper	1232453.BAIF02000058_gene1623	TIGRFAM Phage	NA
UHGV-0203433_49	COG	COG5410	NA	NA
UHGV-0203433_49	Structural annotation	PF17289, PF02562, MF_04147, NF033889, COG5362, COG5410	NA	NA
UHGV-0203433_50	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0203433_50	UniRef90	UniRef90_A0A410QFZ6	NA	NA
UHGV-0203433_50	eggNOG-mapper	994573.T472_0211085	sigma factor activity	NA
UHGV-0203433_50	COG	COG1191	DNA-directed RNA polymerase specialized sigma subunit	NA
UHGV-0203433_50	Structural annotation	PF07374, MF_00674, NF008895, COG1191	NA	NA
UHGV-0203433_51	PHROG	phrog_64	portal protein	head and packaging
UHGV-0203433_51	UniRef90	UniRef90_A0A173UGW9	Phage portal protein, SPP1 family	NA
UHGV-0203433_51	eggNOG-mapper	1298920.KI911353_gene2663	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0203433_51	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0203433_51	Structural annotation	PF05133, MF_04120, TIGR01538, COG5511	NA	NA
UHGV-0203433_52	UniRef90	UniRef90_R6C0B6	Phage capsid scaffolding protein	NA
UHGV-0203433_53	PHROG	phrog_909	major head protein	head and packaging
UHGV-0203433_53	eggNOG-mapper	1298920.KI911353_gene2661	NA	NA
UHGV-0203433_54	PHROG	phrog_29	major head protein	head and packaging
UHGV-0203433_54	UniRef90	UniRef90_UPI001D02C54B	major capsid protein	NA
UHGV-0203433_54	eggNOG-mapper	1298920.KI911353_gene2660	Phage major capsid protein E	NA
UHGV-0203433_54	Pfam	PF03864	Phage major capsid protein E	Phage_cap_E
UHGV-0203433_54	Structural annotation	PF03864, MF_04133, NF041162, COG4653	NA	NA
UHGV-0203433_55	UniRef90	UniRef90_A0A416G2T8	Rho_N domain-containing protein	NA
UHGV-0203433_55	Structural annotation	PF21169	NA	NA
UHGV-0203433_56	eggNOG-mapper	397290.C810_05225	NA	NA
UHGV-0203433_57	eggNOG-mapper	397290.C810_01402	NA	NA
UHGV-0203433_58	PHROG	phrog_4105	NA	unknown function
UHGV-0203433_58	eggNOG-mapper	411459.RUMOBE_00911	NA	NA
UHGV-0203433_59	PHROG	phrog_443	holin	lysis
UHGV-0203433_59	UniRef90	UniRef90_UPI000BA3B743	holin	NA
UHGV-0203433_59	eggNOG-mapper	411490.ANACAC_00704	Putative lactococcus lactis phage r1t holin	NA
UHGV-0203433_59	Pfam	PF16945	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
UHGV-0203433_59	Structural annotation	PF16945	NA	NA
UHGV-0203433_60	Structural annotation	PF07405, TIGR01563, COG5614	NA	NA
UHGV-0203433_61	eggNOG-mapper	1298920.KI911353_gene2654	NA	NA
UHGV-0203433_61	AcrCatalog	cluster_24841	NA	NA
UHGV-0203433_62	Structural annotation	PF05657	NA	NA
UHGV-0203433_63	UniRef90	UniRef90_A0A8D9PGN2	Major tail protein	NA
UHGV-0203433_63	Structural annotation	PF16463, TIGR02126, COG5437	NA	NA
UHGV-0203433_66	PHROG	phrog_14030	NA	unknown function
UHGV-0203433_66	UniRef90	UniRef90_A0A3R6ARM6	Peptidoglycan-binding protein	NA
UHGV-0203433_66	eggNOG-mapper	1235793.C809_02691	N-Acetylmuramoyl-L-alanine amidase	NA
UHGV-0203433_66	COG	COG3023	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	NA
UHGV-0203433_67	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0203433_67	UniRef90	UniRef90_A0A173UI54	Phage-related protein	NA
UHGV-0203433_67	eggNOG-mapper	1408437.JNJN01000010_gene1238	domain protein	NA
UHGV-0203433_67	COG	COG1511	NA	NA
UHGV-0203433_68	PHROG	phrog_7168	homing endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203433_68	UniRef90	UniRef90_A0A173UI60	Group I intron endonuclease	NA
UHGV-0203433_68	eggNOG-mapper	745718.JADT01000019_gene1515	Intron encoded nuclease repeat motif	NA
UHGV-0203433_68	Pfam	PF01541	GIY-YIG catalytic domain	GIY-YIG
UHGV-0203433_68	Pfam	PF07453	NUMOD1 domain	NUMOD1
UHGV-0203433_68	NCBIFam	TIGR01453.1	group I intron endonuclease	NA
UHGV-0203433_68	Structural annotation	PF07453, PF19835, PF04936, TIGR01453	NA	NA
UHGV-0203433_69	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0203433_69	UniRef90	UniRef90_A0A173UHS1	Phage-related protein	NA
UHGV-0203433_69	eggNOG-mapper	1298920.KI911353_gene2649	tape measure	NA
UHGV-0203433_69	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0203433_70	PHROG	phrog_215	structural protein with Ig domain	head and packaging
UHGV-0203433_70	UniRef90	UniRef90_A0A173UG14	BIG2 domain-containing protein	NA
UHGV-0203433_70	eggNOG-mapper	1410626.JHXB01000001_gene2137	repeat protein	NA
UHGV-0203433_70	Pfam	PF02368	Bacterial Ig-like domain (group 2)	Big_2
UHGV-0203433_70	COG	COG4886	Leucine-rich repeat (LRR) protein	NA
UHGV-0203433_70	Structural annotation	PF02368, PF07233, NF038353, NF005261	NA	NA
UHGV-0203433_71	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0203433_71	UniRef90	UniRef90_A0A1I0BKG6	BRO family, N-terminal domain	NA
UHGV-0203433_71	eggNOG-mapper	1443125.Z962_p0009	BRO family, N-terminal domain	NA
UHGV-0203433_71	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0203433_71	COG	COG3617	Prophage antirepressor	NA
UHGV-0203433_71	Structural annotation	PF02498, COG3617	NA	NA
UHGV-0203433_72	PHROG	phrog_1194	NA	unknown function
UHGV-0203433_72	Pfam	PF20458	NA	DUF6711
UHGV-0203433_72	Structural annotation	PF20458, TIGR01633, COG3499	NA	NA
UHGV-0203433_73	PHROG	phrog_18190	NA	unknown function
UHGV-0203433_73	UniRef90	UniRef90_A0A173UFM3	Peptidase S74 domain-containing protein	NA
UHGV-0203433_73	eggNOG-mapper	397290.C810_05239	NA	NA
UHGV-0203433_73	Pfam	PF13884	Chaperone of endosialidase	Peptidase_S74
UHGV-0203433_73	Structural annotation	PF05113, NF033848, COG3500	NA	NA
UHGV-0203433_74	PHROG	phrog_17196	kinase	other
UHGV-0203433_74	eggNOG-mapper	483218.BACPEC_01141	NA	NA
UHGV-0203433_74	Structural annotation	PF19537, PF13619, COG3536	NA	NA
UHGV-0203433_75	COG	COG3266	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	NA
UHGV-0203433_76	eggNOG-mapper	1232452.BAIB02000007_gene1607	NA	NA
UHGV-0203433_77	NCBIFam	NF040910.1	CD1375 family protein	NA
UHGV-0203433_78	KOfam	K18830	pezA; HTH-type transcriptional regulator / antitoxin PezA	NA
UHGV-0203433_78	PHROG	phrog_2967	transcriptional regulator	transcription regulation
UHGV-0203433_78	UniRef90	UniRef90_A0A6L8T004	Helix-turn-helix domain-containing protein	NA
UHGV-0203433_78	eggNOG-mapper	748224.HMPREF9436_01444	NA	NA
UHGV-0203433_78	PADLOC	retron_type_VI_hth_cluster2_1	NA	Retron
UHGV-0203433_78	Pfam	PF12844	Helix-turn-helix domain	HTH_19
UHGV-0203433_78	COG	COG1396	Transcriptional regulator, contains XRE-family HTH domain	NA
UHGV-0203433_78	Structural annotation	PF01381, MF_00535, NF041951, COG1476	NA	NA
UHGV-0203433_80	PHROG	phrog_4608	anti-repressor	transcription regulation
UHGV-0203433_80	UniRef90	UniRef90_UPI001D00AF42	ORF6N domain-containing protein	NA
UHGV-0203433_80	eggNOG-mapper	926561.KB900622_gene670	ORF6N domain	NA
UHGV-0203433_80	Pfam	PF10543	ORF6N domain	ORF6N
UHGV-0203433_80	COG	COG3561	Phage anti-repressor protein Ant	NA
UHGV-0203433_80	Structural annotation	PF10543, TIGR02681, COG3646	NA	NA
UHGV-0203433_85	PHROG	phrog_26861	NA	unknown function
UHGV-0203433_85	UniRef90	UniRef90_A0A173RCS5	Single-stranded DNA-binding protein	NA
UHGV-0203433_85	eggNOG-mapper	483218.BACPEC_01931	Single-strand binding protein family	NA
UHGV-0203433_85	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0203433_85	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0203433_85	Structural annotation	PF00436, PF13567, MF_00984, NF004476, COG0629	NA	NA
UHGV-0203433_86	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0203433_86	PHROG	phrog_77	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203433_86	UniRef90	UniRef90_A0A174JMG0	Chromosome segregation protein	NA
UHGV-0203433_86	eggNOG-mapper	1232453.BAIF02000057_gene1134	nuclear chromosome segregation	NA
UHGV-0203433_86	COG	COG1196	Chromosome segregation ATPase Smc	NA
UHGV-0203433_86	Structural annotation	PF02463, MF_00449, NF041034, COG0419	NA	NA
UHGV-0203433_87	PHROG	phrog_19610	NA	unknown function
UHGV-0203433_89	eggNOG-mapper	1232453.BAIF02000057_gene1135	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203433	Yes	56,713 bps	40.12%	100.00%	0.9819
UHGV-1358608	No	56,813 bps	40.09%	98.49%	0.9817
UHGV-0059039	No	38,073 bps	40.52%	66.00%	0.9820
UHGV-1398397	No	38,073 bps	40.52%	66.00%	0.9820
UHGV-1726488	No	15,319 bps	40.35%	26.56%	0.9819