vOTU-047668

Overview

vOTU representative UHGV-0203458

No. of genomes 2

Genome length 40,438 bps

Completeness 100.00% (complete)

Host Hungatella sp005845265

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047668
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 › vSUBFAM-00095 › vGENUS-02499 › vSUBGEN-28741 › vOTU-047668
Host taxonomy	Bacteria › Firmicutes A › Clostridia › Lachnospirales › Lachnospiraceae › Hungatella › Hungatella sp005845265
Host range breadth	Species
Host prediction method	CRISPR
Lifestyle	Temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203458
BioSample	SAMN12237071
Genome length	40,438 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	63
CDS density	92.76%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203458_1	KOfam	K22299	rghR; HTH-type transcriptional regulator, competence development regulator	NA
UHGV-0203458_1	PHROG	phrog_8	transcriptional regulator	transcription regulation
UHGV-0203458_1	UniRef90	UniRef90_D3AJD0	DNA-binding helix-turn-helix protein	NA
UHGV-0203458_1	eggNOG-mapper	33035.JPJF01000055_gene1671	Cro/C1-type HTH DNA-binding domain	NA
UHGV-0203458_1	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0203458_1	COG	COG1476	DNA-binding transcriptional regulator, XRE-family HTH domain	NA
UHGV-0203458_1	Structural annotation	PF01381, MF_00535, NF041951, COG3655	NA	NA
UHGV-0203458_2	PHROG	phrog_1914	NA	unknown function
UHGV-0203458_2	UniRef90	UniRef90_A0A413LUE8	ImmA/IrrE family metallo-endopeptidase	NA
UHGV-0203458_2	eggNOG-mapper	33035.JPJF01000055_gene1672	IrrE N-terminal-like domain	NA
UHGV-0203458_2	Pfam	PF06114	IrrE N-terminal-like domain	Peptidase_M78
UHGV-0203458_2	COG	COG2856	Zn-dependent peptidase ImmA, M78 family	NA
UHGV-0203458_3	UniRef90	UniRef90_A0A3A6GQZ1	Zinc ribbon domain-containing protein	NA
UHGV-0203458_3	eggNOG-mapper	1499689.CCNN01000007_gene1692	TM2 domain	NA
UHGV-0203458_3	COG	COG2314	NA	NA
UHGV-0203458_4	KOfam	K06400	spoIVCA; site-specific DNA recombinase	NA
UHGV-0203458_4	PHROG	phrog_95	integrase	integration and excision
UHGV-0203458_4	UniRef90	UniRef90_D3AJD3	Resolvase, N-terminal domain protein	NA
UHGV-0203458_4	eggNOG-mapper	1163671.JAGI01000001_gene335	Resolvase, N terminal domain	NA
UHGV-0203458_4	Pfam	PF00239	Resolvase, N terminal domain	Resolvase
UHGV-0203458_4	Pfam	PF13408	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
UHGV-0203458_4	COG	COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	NA
UHGV-0203458_4	Structural annotation	PF00239, NF041201, COG1961	NA	NA
UHGV-0203458_5	UniRef90	UniRef90_A0A413LDX4	GNAT family acetyltransferase	NA
UHGV-0203458_7	KOfam	K11062	entD; probable enterotoxin D	NA
UHGV-0203458_7	PHROG	phrog_3088	amidase	lysis
UHGV-0203458_7	UniRef90	UniRef90_A0A174XN03	Putative N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0203458_7	eggNOG-mapper	1151292.QEW_0991	n-acetylmuramoyl-l-alanine amidase	NA
UHGV-0203458_7	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0203458_7	COG	COG0860	N-acetylmuramoyl-L-alanine amidase	NA
UHGV-0203458_7	Structural annotation	PF01510, PF19127, MF_04111, NF008758, TIGR04035, COG5632	NA	NA
UHGV-0203458_8	PHROG	phrog_199	holin	lysis
UHGV-0203458_8	UniRef90	UniRef90_D3AUA6	Toxin secretion/phage lysis holin	NA
UHGV-0203458_8	eggNOG-mapper	428126.CLOSPI_02191	Bacteriophage holin family	NA
UHGV-0203458_8	Pfam	PF05105	Bacteriophage holin family	Phage_holin_4_1
UHGV-0203458_8	NCBIFam	TIGR01593.1	toxin secretion/phage lysis holin	NA
UHGV-0203458_8	Structural annotation	PF05105, TIGR01593, COG4824	NA	NA
UHGV-0203458_9	eggNOG-mapper	931276.Cspa_c27110	NA	NA
UHGV-0203458_10	PHROG	phrog_19280	NA	unknown function
UHGV-0203458_10	UniRef90	UniRef90_A0A174NC72	BppU_N domain-containing protein	NA
UHGV-0203458_10	eggNOG-mapper	742733.HMPREF9469_00973	NA	NA
UHGV-0203458_10	Structural annotation	PF10651	NA	NA
UHGV-0203458_13	PHROG	phrog_30220	NA	unknown function
UHGV-0203458_13	UniRef90	UniRef90_A0A1I0WS75	Phage tail-collar fibre protein	NA
UHGV-0203458_13	eggNOG-mapper	585501.HMPREF6123_0821	NA	NA
UHGV-0203458_13	Structural annotation	PF20620, NF038128	NA	NA
UHGV-0203458_14	PHROG	phrog_18725	NA	unknown function
UHGV-0203458_14	eggNOG-mapper	585501.HMPREF6123_0822	NA	NA
UHGV-0203458_15	PHROG	phrog_13879	NA	unknown function
UHGV-0203458_15	eggNOG-mapper	742740.HMPREF9474_03516	NA	NA
UHGV-0203458_15	Structural annotation	PF03256, PF16466, PF13550, MF_00813, NF033848, COG3500	NA	NA
UHGV-0203458_16	PHROG	phrog_1194	NA	unknown function
UHGV-0203458_16	eggNOG-mapper	742740.HMPREF9474_03515	NA	NA
UHGV-0203458_16	Structural annotation	PF20458, TIGR02126, COG3499	NA	NA
UHGV-0203458_17	PHROG	phrog_1535	tail length tape measure protein	tail
UHGV-0203458_17	UniRef90	UniRef90_A0A174WQ97	Phage-like protein	NA
UHGV-0203458_17	eggNOG-mapper	742740.HMPREF9474_03514	tape measure	NA
UHGV-0203458_17	COG	COG3941	Phage tail tape-measure protein, controls tail length	NA
UHGV-0203458_17	Structural annotation	PF20155, TIGR01760, COG3941	NA	NA
UHGV-0203458_18	PHROG	phrog_8355	NA	unknown function
UHGV-0203458_18	UniRef90	UniRef90_A0A1I0K8W5	Bacteriophage Gp15 protein	NA
UHGV-0203458_18	eggNOG-mapper	742740.HMPREF9474_03513	NA	NA
UHGV-0203458_18	Pfam	PF06854	Bacteriophage Gp15 protein	Phage_Gp15
UHGV-0203458_18	Structural annotation	PF06854	NA	NA
UHGV-0203458_19	PHROG	phrog_8300	NA	unknown function
UHGV-0203458_19	eggNOG-mapper	742740.HMPREF9474_03512	NA	NA
UHGV-0203458_19	Structural annotation	PF06854	NA	NA
UHGV-0203458_20	PHROG	phrog_820	major tail protein	tail
UHGV-0203458_20	eggNOG-mapper	742740.HMPREF9474_03511	domain, Protein	NA
UHGV-0203458_20	COG	COG5492	NA	NA
UHGV-0203458_20	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0203458_21	PHROG	phrog_2595	head-tail connector protein	connector
UHGV-0203458_21	UniRef90	UniRef90_UPI001D068DAC	minor capsid protein	NA
UHGV-0203458_21	eggNOG-mapper	742740.HMPREF9474_03510	NA	NA
UHGV-0203458_21	Pfam	PF12691	Bacteriophage minor capsid protein	Minor_capsid_3
UHGV-0203458_21	Structural annotation	PF12691, COG5003	NA	NA
UHGV-0203458_22	PHROG	phrog_556	minor head protein	head and packaging
UHGV-0203458_22	eggNOG-mapper	742740.HMPREF9474_03509	NA	NA
UHGV-0203458_23	PHROG	phrog_8710	NA	unknown function
UHGV-0203458_23	eggNOG-mapper	742740.HMPREF9474_03508	NA	NA
UHGV-0203458_23	Structural annotation	PF10665, TIGR01563, COG5614	NA	NA
UHGV-0203458_24	PHROG	phrog_541	head-tail adaptor	connector
UHGV-0203458_24	eggNOG-mapper	1304866.K413DRAFT_0783	NA	NA
UHGV-0203458_25	PHROG	phrog_1378	NA	unknown function
UHGV-0203458_25	eggNOG-mapper	742740.HMPREF9474_03506	NA	NA
UHGV-0203458_26	PHROG	phrog_422	major head protein	head and packaging
UHGV-0203458_26	UniRef90	UniRef90_E7GRG0	Phage major capsid protein	NA
UHGV-0203458_26	eggNOG-mapper	742740.HMPREF9474_03505	NA	NA
UHGV-0203458_26	Structural annotation	PF19821, MF_04119, TIGR04387, COG4653	NA	NA
UHGV-0203458_27	PHROG	phrog_2303	head scaffolding protein	head and packaging
UHGV-0203458_27	eggNOG-mapper	742740.HMPREF9474_03504	NA	NA
UHGV-0203458_28	PHROG	phrog_3675	NA	unknown function
UHGV-0203458_28	UniRef90	UniRef90_A0A3E2UCU7	Dihydrolipoyl dehydrogenase	NA
UHGV-0203458_28	eggNOG-mapper	585501.HMPREF6123_0838	YjcQ protein	NA
UHGV-0203458_28	Pfam	PF09639	YjcQ protein	YjcQ
UHGV-0203458_28	Structural annotation	PF09639, TIGR04176, COG2345	NA	NA
UHGV-0203458_30	PHROG	phrog_581	minor head protein	head and packaging
UHGV-0203458_30	UniRef90	UniRef90_UPI001106A636	minor capsid protein	NA
UHGV-0203458_30	eggNOG-mapper	742740.HMPREF9474_03503	Phage minor capsid protein 2	NA
UHGV-0203458_30	Pfam	PF06152	Phage minor capsid protein 2	Phage_min_cap2
UHGV-0203458_30	COG	COG2369	NA	NA
UHGV-0203458_30	Structural annotation	PF06152	NA	NA
UHGV-0203458_31	PHROG	phrog_533	portal protein	head and packaging
UHGV-0203458_31	UniRef90	UniRef90_A0A174WUZ7	Phage minor capsid protein	NA
UHGV-0203458_31	eggNOG-mapper	742740.HMPREF9474_03501	NA	NA
UHGV-0203458_31	Structural annotation	PF05133, MF_04120, TIGR01542, COG5511	NA	NA
UHGV-0203458_32	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0203458_32	PHROG	phrog_2	terminase large subunit	head and packaging
UHGV-0203458_32	UniRef90	UniRef90_A0A174WYX0	Phage terminase, large subunit	NA
UHGV-0203458_32	eggNOG-mapper	1298920.KI911353_gene4856	Phage terminase, large subunit, PBSX family	NA
UHGV-0203458_32	COG	COG1783	Phage terminase large subunit	NA
UHGV-0203458_32	Structural annotation	PF03237, PF17289, MF_04148, TIGR01547, COG1783	NA	NA
UHGV-0203458_33	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0203458_33	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0203458_33	UniRef90	UniRef90_A0A374P9L2	Terminase small subunit	NA
UHGV-0203458_33	eggNOG-mapper	742740.HMPREF9474_03499	Terminase Small Subunit	NA
UHGV-0203458_33	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0203458_33	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0203458_33	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0203458_34	PHROG	phrog_36	transcriptional regulator	transcription regulation
UHGV-0203458_34	eggNOG-mapper	1304866.K413DRAFT_0819	NA	NA
UHGV-0203458_35	UniRef90	UniRef90_R6ZHB9	Putative bacteriocin ABC transporter	NA
UHGV-0203458_35	eggNOG-mapper	742733.HMPREF9469_02894	NA	NA
UHGV-0203458_35	Structural annotation	PF19962, COG1579	NA	NA
UHGV-0203458_36	Structural annotation	PF14192	NA	NA
UHGV-0203458_39	UniRef90	UniRef90_A0A8B3A603	DNA_pol3_beta_2 domain-containing protein	NA
UHGV-0203458_39	eggNOG-mapper	1232447.BAHW02000048_gene2980	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	NA
UHGV-0203458_39	COG	COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	NA
UHGV-0203458_39	Structural annotation	PF02767, MF_00317, TIGR00663, COG0592	NA	NA
UHGV-0203458_41	KOfam	K00558	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	NA
UHGV-0203458_41	PHROG	phrog_116	DNA methyltransferase	other
UHGV-0203458_41	UniRef90	UniRef90_E7GTS2	DNA (cytosine-5-)-methyltransferase	NA
UHGV-0203458_41	eggNOG-mapper	742740.HMPREF9474_04317	C-5 cytosine-specific DNA methylase	NA
UHGV-0203458_41	PADLOC	MTase_II_00020	Type II methyltransferase	RM
UHGV-0203458_41	Pfam	PF00145	C-5 cytosine-specific DNA methylase	DNA_methylase
UHGV-0203458_41	COG	COG0270	DNA-cytosine methylase	NA
UHGV-0203458_41	Structural annotation	PF00145, MF_00351, TIGR00675, COG0270	NA	NA
UHGV-0203458_42	KOfam	K06223	dam; DNA adenine methylase [EC:2.1.1.72]	NA
UHGV-0203458_42	PHROG	phrog_56	DNA methyltransferase	other
UHGV-0203458_42	UniRef90	UniRef90_A0A174WGT9	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0203458_42	eggNOG-mapper	610130.Closa_0735	D12 class N6 adenine-specific DNA methyltransferase	NA
UHGV-0203458_42	PADLOC	MTase_II_00030	Type II methyltransferase	RM
UHGV-0203458_42	Pfam	PF02086	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
UHGV-0203458_42	COG	COG0338	DNA-adenine methylase	NA
UHGV-0203458_42	Structural annotation	PF02086, MF_01872, NF008152, COG0338	NA	NA
UHGV-0203458_45	PHROG	phrog_31900	NA	unknown function
UHGV-0203458_46	eggNOG-mapper	411468.CLOSCI_00572	NA	NA
UHGV-0203458_49	UniRef90	UniRef90_UPI00189796FC	zinc-ribbon domain-containing protein	NA
UHGV-0203458_49	Structural annotation	PF13248	NA	NA
UHGV-0203458_50	UniRef90	UniRef90_A0A174WT68	ATP--guanido phosphotransferase	NA
UHGV-0203458_51	KOfam	K01356	lexA; repressor LexA [EC:3.4.21.88]	NA
UHGV-0203458_51	UniRef90	UniRef90_A0A413LUD6	LexA_DNA_bind domain-containing protein	NA
UHGV-0203458_51	eggNOG-mapper	1304866.K413DRAFT_1203	LexA DNA binding domain	NA
UHGV-0203458_51	Pfam	PF01726	LexA DNA binding domain	LexA_DNA_bind
UHGV-0203458_51	COG	COG1974	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	NA
UHGV-0203458_51	Structural annotation	PF01726, MF_00732, TIGR00738, COG1959	NA	NA
UHGV-0203458_53	PHROG	phrog_9804	NA	unknown function
UHGV-0203458_53	UniRef90	UniRef90_A0A174WNQ9	Loader and inhibitor of phage G40P	NA
UHGV-0203458_53	eggNOG-mapper	632292.Calhy_0752	Loader and inhibitor of phage G40P	NA
UHGV-0203458_53	Pfam	PF11417	Loader and inhibitor of phage G40P	Inhibitor_G39P
UHGV-0203458_53	Structural annotation	PF11417	NA	NA
UHGV-0203458_54	PHROG	phrog_10469	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0203458_54	UniRef90	UniRef90_A0A174WT25	Replication initiator A domain-containing protein	NA
UHGV-0203458_54	eggNOG-mapper	397291.C804_01603	DnaD domain protein	NA
UHGV-0203458_54	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0203458_54	Structural annotation	PF10771, MF_01177, TIGR01714, COG0640	NA	NA
UHGV-0203458_55	KOfam	K01160	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	NA
UHGV-0203458_55	PHROG	phrog_1682	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0203458_55	UniRef90	UniRef90_A0A174WGH7	Holliday junction resolvase	NA
UHGV-0203458_55	eggNOG-mapper	1304866.K413DRAFT_3018	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	NA
UHGV-0203458_55	COG	COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	NA
UHGV-0203458_55	Structural annotation	PF19595, NF007305, COG4570	NA	NA
UHGV-0203458_56	PHROG	phrog_7566	NA	unknown function
UHGV-0203458_56	UniRef90	UniRef90_A0A373CFM5	ClpX-type ZB domain-containing protein	NA
UHGV-0203458_56	eggNOG-mapper	1304866.K413DRAFT_3017	NA	NA
UHGV-0203458_57	PHROG	phrog_1227	exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203458_57	UniRef90	UniRef90_A0A413LUL6	NA	NA
UHGV-0203458_57	eggNOG-mapper	742733.HMPREF9469_01848	NA	NA
UHGV-0203458_57	Pfam	PF12684	NA	DUF3799
UHGV-0203458_57	COG	COG1074	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	NA
UHGV-0203458_57	Structural annotation	PF12684, TIGR01896, COG4343	NA	NA
UHGV-0203458_58	PHROG	phrog_561	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0203458_58	UniRef90	UniRef90_A0A6N7W7U3	Recombinase RecT	NA
UHGV-0203458_58	eggNOG-mapper	33035.JPJF01000071_gene4462	NA	NA
UHGV-0203458_58	Pfam	PF03837	RecT family	RecT
UHGV-0203458_58	Structural annotation	PF03837, TIGR01913, COG3723	NA	NA
UHGV-0203458_59	KOfam	K19171	dndD; DNA sulfur modification protein DndD	NA
UHGV-0203458_59	PHROG	phrog_1499	NA	unknown function
UHGV-0203458_59	UniRef90	UniRef90_D3AA93	AAA_23 domain-containing protein	NA
UHGV-0203458_59	eggNOG-mapper	742733.HMPREF9469_01850	DNA recombination	NA
UHGV-0203458_59	Pfam	PF13476	AAA domain	AAA_23
UHGV-0203458_59	COG	COG0497	DNA repair ATPase RecN	NA
UHGV-0203458_59	Structural annotation	PF11398, MF_00365, NF008121, COG0497	NA	NA
UHGV-0203458_63	UniRef90	UniRef90_A0A353MV53	XRE family transcriptional regulator	NA
UHGV-0203458_63	Structural annotation	PF05339, NF041951, COG1476	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203458	Yes	40,438 bps	46.69%	100.00%	0.9814
UHGV-2062497	No	10,523 bps	44.55%	26.09%	0.9797