vOTU-047706

Overview

vOTU representative UHGV-0203844

No. of genomes 1

Genome length 33,412 bps

Completeness 100.00% (complete)

Host Lacticaseibacillus

Prediction confidence Confident

vOTU information
vOTU ID	vOTU-047706
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria › Heunggongvirae › Uroviricota › Caudoviricetes
Taxonomy (UHGV)	vFAM-00011 › vSUBFAM-02259 › vGENUS-03380 › vSUBGEN-09978 › vOTU-047706
Host taxonomy	Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lacticaseibacillus
Host range breadth	Genus
Host prediction method	CRISPR
Lifestyle	Lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0203844
BioSample	NA
Genome length	33,412 bps
CheckV completeness	100.00% (complete)
CheckV contamination	0.00%
CDS count	51
CDS density	90.67%
tRNA count	0
Integrase	No
Viral confidence	Confident

Representative genome content

Select view: Genome viewer Functional annotation

Functional annotation

Gene ID	Reference	Reference ID	Information	Category
UHGV-0203844_1	PHROG	phrog_1233	NA	unknown function
UHGV-0203844_1	eggNOG-mapper	936375.HMPREF1152_1074	NA	NA
UHGV-0203844_2	PHROG	phrog_419	NA	unknown function
UHGV-0203844_2	UniRef90	UniRef90_UPI001C4DCDCC	PGDYG domain-containing protein	NA
UHGV-0203844_2	eggNOG-mapper	1071400.LBUCD034_0939	NA	NA
UHGV-0203844_2	Structural annotation	PF14083	NA	NA
UHGV-0203844_3	PHROG	phrog_172	head scaffolding protein	head and packaging
UHGV-0203844_3	UniRef90	UniRef90_A0A0E2BSV4	Putative scaffold protein	NA
UHGV-0203844_3	eggNOG-mapper	235201.Q597V6_9CAUD	aminoacyl-tRNA ligase activity	NA
UHGV-0203844_3	Pfam	PF14265	NA	DUF4355
UHGV-0203844_3	Structural annotation	PF14265	NA	NA
UHGV-0203844_4	PHROG	phrog_840	major head protein	head and packaging
UHGV-0203844_4	UniRef90	UniRef90_A0A0R1QKJ4	Major head protein	NA
UHGV-0203844_4	eggNOG-mapper	1108070.G8FUY8_9CAUD	NA	NA
UHGV-0203844_4	Structural annotation	PF03864, MF_04119, TIGR04387, COG1659	NA	NA
UHGV-0203844_5	PHROG	phrog_4417	NA	unknown function
UHGV-0203844_5	UniRef90	UniRef90_K6SGT4	NA	NA
UHGV-0203844_5	eggNOG-mapper	543734.LCABL_13320	NA	NA
UHGV-0203844_5	Structural annotation	PF03414, NF041524, COG1442	NA	NA
UHGV-0203844_6	PHROG	phrog_132	head-tail adaptor	connector
UHGV-0203844_6	UniRef90	UniRef90_A0A0E2C3Z7	Putative phage DNA packaging protein	NA
UHGV-0203844_6	eggNOG-mapper	235201.Q597V3_9CAUD	Phage gp6-like head-tail connector protein	NA
UHGV-0203844_6	Pfam	PF05135	Phage gp6-like head-tail connector protein	Phage_connect_1
UHGV-0203844_6	Structural annotation	PF05135	NA	NA
UHGV-0203844_7	PHROG	phrog_348	minor head protein	head and packaging
UHGV-0203844_7	UniRef90	UniRef90_J0UU62	NA	NA
UHGV-0203844_7	eggNOG-mapper	235201.Q597V2_9CAUD	NA	NA
UHGV-0203844_7	Structural annotation	PF05521, TIGR01563, COG5614	NA	NA
UHGV-0203844_8	PHROG	phrog_5	tail completion or Neck1 protein	connector
UHGV-0203844_8	UniRef90	UniRef90_A0A7Z8JJE4	HK97 gp10 family phage protein	NA
UHGV-0203844_8	eggNOG-mapper	235201.Q597V1_9CAUD	exonuclease activity	NA
UHGV-0203844_8	Pfam	PF04883	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
UHGV-0203844_8	NCBIFam	TIGR01725.1	HK97-gp10 family putative phage morphogenesis protein	NA
UHGV-0203844_8	Structural annotation	PF05069, TIGR01725, COG5005	NA	NA
UHGV-0203844_10	PHROG	phrog_238	major tail protein	tail
UHGV-0203844_10	UniRef90	UniRef90_A0A829TP18	Major tail protein	NA
UHGV-0203844_10	eggNOG-mapper	1108070.G8FV40_9CAUD	Phage major tail protein 2	NA
UHGV-0203844_10	NCBIFam	TIGR02126.1	phage major tail protein, TP901-1 family	NA
UHGV-0203844_10	Structural annotation	PF06199, TIGR02126, COG5437	NA	NA
UHGV-0203844_11	PHROG	phrog_183	tail chaperone protein	tail
UHGV-0203844_11	UniRef90	UniRef90_A0A165NSG9	NA	NA
UHGV-0203844_11	eggNOG-mapper	1108070.G8FV39_9CAUD	Pfam:Phage_TAC_12	NA
UHGV-0203844_11	Pfam	PF12363	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
UHGV-0203844_11	Structural annotation	PF12363	NA	NA
UHGV-0203844_12	PHROG	phrog_2567	NA	unknown function
UHGV-0203844_13	PHROG	phrog_5493	tail length tape measure protein	tail
UHGV-0203844_13	UniRef90	UniRef90_UPI00091589AA	phage tail tape measure protein	NA
UHGV-0203844_13	eggNOG-mapper	585506.HMPREF0877_0855	Phage-related minor tail protein	NA
UHGV-0203844_13	Pfam	PF10145	Phage-related minor tail protein	PhageMin_Tail
UHGV-0203844_13	NCBIFam	TIGR01760.1	phage tail tape measure protein	NA
UHGV-0203844_13	COG	COG5283	Phage-related tail protein	NA
UHGV-0203844_13	Structural annotation	PF10145, TIGR01760, COG3941	NA	NA
UHGV-0203844_14	PHROG	phrog_33	distal tail protein Dit	tail
UHGV-0203844_14	UniRef90	UniRef90_A0A0R1QQZ6	Minor tail protein	NA
UHGV-0203844_14	eggNOG-mapper	235201.Q597U5_9CAUD	Phage tail protein	NA
UHGV-0203844_14	Pfam	PF05709	Phage tail protein RIFT-related domain	Sipho_tail
UHGV-0203844_14	Structural annotation	PF05709, PF20753, TIGR01633, COG4722	NA	NA
UHGV-0203844_15	PHROG	phrog_3095	tail protein with endopeptidase activity	other
UHGV-0203844_15	UniRef90	UniRef90_UPI00091D4B1D	phage tail protein	NA
UHGV-0203844_15	eggNOG-mapper	235201.Q597U4_9CAUD	peptidoglycan catabolic process	NA
UHGV-0203844_15	Pfam	PF06605	Prophage endopeptidase tail	Prophage_tail
UHGV-0203844_15	Structural annotation	PF06605, PF18994, PF18463, TIGR01665, COG4926	NA	NA
UHGV-0203844_16	PHROG	phrog_29002	minor tail protein	tail
UHGV-0203844_16	UniRef90	UniRef90_A0A0E2C409	Minor tail protein	NA
UHGV-0203844_16	eggNOG-mapper	235201.Q597U3_9CAUD	NA	NA
UHGV-0203844_16	Pfam	PF10651	BppU N-terminal domain	BppU_N
UHGV-0203844_17	PHROG	phrog_13847	NA	unknown function
UHGV-0203844_18	PHROG	phrog_3671	NA	unknown function
UHGV-0203844_19	PHROG	phrog_1299	holin	lysis
UHGV-0203844_19	UniRef90	UniRef90_Q9MCC7	Holin	NA
UHGV-0203844_19	eggNOG-mapper	1196324.A374_09918	Bacteriophage A118-like holin, Hol118	NA
UHGV-0203844_19	Structural annotation	PF06946	NA	NA
UHGV-0203844_20	KOfam	K01447	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	NA
UHGV-0203844_20	PHROG	phrog_3393	endolysin	lysis
UHGV-0203844_20	UniRef90	UniRef90_Q9MCC8	Lysin	NA
UHGV-0203844_20	eggNOG-mapper	51369.Q9MCC8_9CAUD	peptidoglycan catabolic process	NA
UHGV-0203844_20	Pfam	PF01510	N-acetylmuramoyl-L-alanine amidase	Amidase_2
UHGV-0203844_20	Structural annotation	PF01510, MF_04111, NF008758, COG5632	NA	NA
UHGV-0203844_21	PHROG	phrog_3	transcriptional repressor	transcription regulation
UHGV-0203844_21	UniRef90	UniRef90_A0A510WQI3	HTH cro/C1-type domain-containing protein	NA
UHGV-0203844_21	eggNOG-mapper	51369.O64369_9CAUD	sequence-specific DNA binding	NA
UHGV-0203844_21	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0203844_21	Structural annotation	PF01381, NF041951, COG1476	NA	NA
UHGV-0203844_22	PHROG	phrog_130	anti-repressor Ant	transcription regulation
UHGV-0203844_22	UniRef90	UniRef90_L7RH06	BRO-N domain containing protein	NA
UHGV-0203844_22	eggNOG-mapper	936140.AEOT01000014_gene1322	BRO family, N-terminal domain	NA
UHGV-0203844_22	Pfam	PF02498	BRO family, N-terminal domain	Bro-N
UHGV-0203844_22	Pfam	PF04480	NA	DUF559
UHGV-0203844_22	COG	COG3617	Prophage antirepressor	NA
UHGV-0203844_23	KOfam	K07741	antB; anti-repressor protein	NA
UHGV-0203844_23	PHROG	phrog_63	anti-repressor Ant	transcription regulation
UHGV-0203844_23	UniRef90	UniRef90_UPI0007DF4F0D	phage antirepressor KilAC domain-containing protein	NA
UHGV-0203844_23	eggNOG-mapper	1423816.BACQ01000027_gene970	Phage regulatory protein Rha (Phage_pRha)	NA
UHGV-0203844_23	Pfam	PF09669	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
UHGV-0203844_23	Pfam	PF03374	Phage antirepressor protein KilAC domain	ANT
UHGV-0203844_23	NCBIFam	TIGR02681.1	phage regulatory protein, Rha family	NA
UHGV-0203844_23	COG	COG3645	Phage antirepressor protein YoqD, KilAC domain	NA
UHGV-0203844_23	Structural annotation	PF03374, PF09669, TIGR02681, COG3645, COG3646	NA	NA
UHGV-0203844_24	Pfam	PF01381	Helix-turn-helix	HTH_3
UHGV-0203844_27	PHROG	phrog_8306	NA	unknown function
UHGV-0203844_28	PHROG	phrog_2324	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UHGV-0203844_28	UniRef90	UniRef90_A0A8A6BBK0	ERF family protein	NA
UHGV-0203844_28	eggNOG-mapper	663241.C9E2M9_9CAUD	ERF superfamily	NA
UHGV-0203844_28	Pfam	PF04404	ERF superfamily	ERF
UHGV-0203844_28	Structural annotation	PF04404, TIGR00607	NA	NA
UHGV-0203844_29	PHROG	phrog_270	replication initiation protein	DNA, RNA and nucleotide metabolism
UHGV-0203844_29	UniRef90	UniRef90_UPI0011E7C89E	helix-turn-helix domain-containing protein	NA
UHGV-0203844_29	eggNOG-mapper	387344.LVIS_1129	Helix-turn-helix domain	NA
UHGV-0203844_29	Pfam	PF13730	Helix-turn-helix domain	HTH_36
UHGV-0203844_29	COG	COG3935	DNA replication protein DnaD	NA
UHGV-0203844_30	PHROG	phrog_2514	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UHGV-0203844_30	UniRef90	UniRef90_A8YQM0	Putative replication protein	NA
UHGV-0203844_30	eggNOG-mapper	146269.A8YQM0_9CAUD	calcium ion binding	NA
UHGV-0203844_31	KOfam	K02314	dnaB; replicative DNA helicase [EC:5.6.2.3]	NA
UHGV-0203844_31	PHROG	phrog_19	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UHGV-0203844_31	UniRef90	UniRef90_A0A0P0IQD4	Replicative DNA helicase	NA
UHGV-0203844_31	eggNOG-mapper	39103.U5U3Y9_9CAUD	DNA helicase activity	NA
UHGV-0203844_31	Pfam	PF03796	DnaB-like helicase C terminal domain	DnaB_C
UHGV-0203844_31	Structural annotation	PF03796, PF00772, MF_04155, TIGR00665, COG0305	NA	NA
UHGV-0203844_32	PHROG	phrog_8182	NA	unknown function
UHGV-0203844_32	UniRef90	UniRef90_A0A0N7IR79	Helicase IV	NA
UHGV-0203844_33	KOfam	K03111	ssb; single-strand DNA-binding protein	NA
UHGV-0203844_33	PHROG	phrog_44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UHGV-0203844_33	UniRef90	UniRef90_UPI001F508CB3	single-stranded DNA-binding protein	NA
UHGV-0203844_33	eggNOG-mapper	568703.LGG_01107	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	NA
UHGV-0203844_33	Pfam	PF00436	Single-strand binding protein family	SSB
UHGV-0203844_33	NCBIFam	TIGR00621.2	single-stranded DNA-binding protein	NA
UHGV-0203844_33	COG	COG0629	Single-stranded DNA-binding protein	NA
UHGV-0203844_33	HAMAP	MF_00984	Single-stranded DNA-binding protein	NA
UHGV-0203844_33	Structural annotation	PF00436, MF_00984, NF005580, COG0629	NA	NA
UHGV-0203844_34	UniRef90	UniRef90_A0A5R8LHX1	XRE family transcriptional regulator	NA
UHGV-0203844_34	Structural annotation	PF01381, NF041951, COG3655	NA	NA
UHGV-0203844_35	PHROG	phrog_4378	NA	unknown function
UHGV-0203844_35	UniRef90	UniRef90_A0A829GRC5	NA	NA
UHGV-0203844_35	eggNOG-mapper	1423732.BALS01000098_gene1435	NA	NA
UHGV-0203844_35	Structural annotation	PF09953, PF19575	NA	NA
UHGV-0203844_36	PHROG	phrog_190	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UHGV-0203844_36	UniRef90	UniRef90_A0A179YIE3	NA	NA
UHGV-0203844_36	eggNOG-mapper	279281.Q6J1V2_9CAUD	NA	NA
UHGV-0203844_36	Pfam	PF06356	NA	DUF1064
UHGV-0203844_36	Structural annotation	PF06356, MF_04160, NF033179, COG2887	NA	NA
UHGV-0203844_38	PHROG	phrog_5222	NA	unknown function
UHGV-0203844_38	UniRef90	UniRef90_A0A0E2BWQ8	NA	NA
UHGV-0203844_39	KOfam	K00571	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	NA
UHGV-0203844_39	PHROG	phrog_67	DNA methyltransferase	other
UHGV-0203844_39	UniRef90	UniRef90_A0A0R1QJY9	Methyltransferase	NA
UHGV-0203844_39	eggNOG-mapper	1423816.BACQ01000027_gene957	Belongs to the N(4) N(6)-methyltransferase family	NA
UHGV-0203844_39	PADLOC	MTase_II_00157	Type II methyltransferase	RM
UHGV-0203844_39	Pfam	PF01555	DNA methylase	N6_N4_Mtase
UHGV-0203844_39	COG	COG0863	DNA modification methylase	NA
UHGV-0203844_39	Structural annotation	PF01555, MF_01872, NF010253, COG0863	NA	NA
UHGV-0203844_40	PHROG	phrog_12883	NA	unknown function
UHGV-0203844_40	UniRef90	UniRef90_UPI0004E1699C	NA	NA
UHGV-0203844_40	eggNOG-mapper	1423732.BALS01000058_gene2831	NA	NA
UHGV-0203844_41	PHROG	phrog_19188	NA	unknown function
UHGV-0203844_42	PHROG	phrog_3327	NA	unknown function
UHGV-0203844_42	UniRef90	UniRef90_A0A6B8YWE0	4Fe-4S ferredoxin, iron-sulfur binding	NA
UHGV-0203844_42	eggNOG-mapper	632112.C1KFT5_9CAUD	NA	NA
UHGV-0203844_43	PHROG	phrog_7157	NA	unknown function
UHGV-0203844_44	UniRef90	UniRef90_A0A0M2G199	Transcriptional regulator	NA
UHGV-0203844_44	Structural annotation	PF13443, NF041951, COG1396	NA	NA
UHGV-0203844_45	PHROG	phrog_248	transcriptional activator	transcription regulation
UHGV-0203844_45	UniRef90	UniRef90_A0A5R8LB56	Transcriptional regulator	NA
UHGV-0203844_45	eggNOG-mapper	568703.LGG_01120	NA	NA
UHGV-0203844_46	PHROG	phrog_704	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UHGV-0203844_46	UniRef90	UniRef90_A0A7Y7QHQ5	Transposase	NA
UHGV-0203844_46	eggNOG-mapper	146269.A8YQN3_9CAUD	NA	NA
UHGV-0203844_46	Pfam	PF07750	GcrA cell cycle regulator	GcrA
UHGV-0203844_46	Structural annotation	PF14582, MF_00325, NF003117, COG1311	NA	NA
UHGV-0203844_47	KOfam	K06191	nrdH; glutaredoxin-like protein NrdH	NA
UHGV-0203844_47	PHROG	phrog_22	thioredoxin domain	DNA, RNA and nucleotide metabolism
UHGV-0203844_47	UniRef90	UniRef90_A0A4V1P3A2	Ribonucleoside-diphosphate reductase	NA
UHGV-0203844_47	eggNOG-mapper	543734.LCABL_05780	NA	NA
UHGV-0203844_47	Structural annotation	PF13728, MF_01835, NF007657, COG3118	NA	NA
UHGV-0203844_48	KOfam	K07474	xtmA; phage terminase small subunit	NA
UHGV-0203844_48	PHROG	phrog_51	terminase small subunit	head and packaging
UHGV-0203844_48	UniRef90	UniRef90_A0A512PW71	Terminase small subunit	NA
UHGV-0203844_48	eggNOG-mapper	585506.HMPREF0877_0869	Terminase small subunit	NA
UHGV-0203844_48	Pfam	PF03592	Terminase small subunit	Terminase_2
UHGV-0203844_48	COG	COG3728	Phage terminase, small subunit	NA
UHGV-0203844_48	Structural annotation	PF03592, COG3728	NA	NA
UHGV-0203844_49	KOfam	K06909	xtmB; phage terminase large subunit	NA
UHGV-0203844_49	PHROG	phrog_3717	terminase large subunit	head and packaging
UHGV-0203844_49	UniRef90	UniRef90_A0A829TH33	Phage terminase, large subunit	NA
UHGV-0203844_49	eggNOG-mapper	585506.HMPREF0877_0868	Phage terminase large subunit	NA
UHGV-0203844_49	Pfam	PF04466	Phage terminase large subunit	Terminase_3
UHGV-0203844_49	Pfam	PF17288	Terminase RNAseH like domain	Terminase_3C
UHGV-0203844_49	NCBIFam	TIGR01547.1	PBSX family phage terminase large subunit	NA
UHGV-0203844_49	COG	COG1783	Phage terminase large subunit	NA
UHGV-0203844_49	HAMAP	MF_04145	Terminase, large subunit	NA
UHGV-0203844_49	Structural annotation	PF04466, PF17288, MF_04145, TIGR01547, COG1783	NA	NA
UHGV-0203844_50	PHROG	phrog_64	portal protein	head and packaging
UHGV-0203844_50	UniRef90	UniRef90_A0A0R1QKN8	Portal protein	NA
UHGV-0203844_50	eggNOG-mapper	235201.Q597V8_9CAUD	Phage portal protein, SPP1 Gp6-like	NA
UHGV-0203844_50	Pfam	PF05133	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
UHGV-0203844_50	NCBIFam	TIGR01538.1	phage portal protein	NA
UHGV-0203844_50	Structural annotation	PF05133, MF_04120, TIGR01538, COG5518	NA	NA
UHGV-0203844_51	PHROG	phrog_115	minor head protein	head and packaging
UHGV-0203844_51	UniRef90	UniRef90_UPI001E5492FC	phage head morphogenesis protein	NA
UHGV-0203844_51	eggNOG-mapper	235201.Q597V7_9CAUD	Phage Mu protein F like protein	NA
UHGV-0203844_51	NCBIFam	TIGR01641.1	minor capsid protein	NA
UHGV-0203844_51	Structural annotation	PF06152, TIGR01641	NA	NA

All genomes

Genome	vOTU repr.	Length	GC content	CheckV completeness	geNomad score
UHGV-0203844	Yes	33,412 bps	45.07%	100.00%	0.9818